Dbfetch

Dbfetch

ID   JQ422318; SV 1; linear; genomic RNA; STD; VRL; 549 BP.
XX
AC   JQ422318;
XX
DT   07-AUG-2012 (Rel. 113, Created)
DT   07-JUL-2013 (Rel. 117, Last updated, Version 2)
XX
DE   Citrus tristeza virus isolate 06_CT_MIS_FOR_Man_01 p20 protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; Riboviria; Closteroviridae; Closterovirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-549
RX   PUBMED; 23818960.
RA   Davino S., Willemsen A., Panno S., Davino M., Catara A., Elena S.F.,
RA   Rubio L.;
RT   "Emergence and Phylodynamics of Citrus tristeza virus in Sicily, Italy";
RL   PLoS One 8(6):E66700-E66700(2013).
XX
RN   [2]
RP   1-549
RA   Davino S., Panno S., Davino M., Rubio L.;
RT   "Citrus tristeza virus in Italy: fron an outbreak to a pandemy";
RL   Unpublished.
XX
RN   [3]
RP   1-549
RA   Davino S., Panno S., Davino M., Rubio L.;
RT   ;
RL   Submitted (18-JAN-2012) to the INSDC.
RL   DEMETRA, University of Palermo, Viale delle Scienze ed. 4, Palermo, Sicily
RL   90128, Italy
XX
DR   MD5; 2ddcc30f71c37c7245d8336f71d15371.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..549
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus sp."
FT                   /isolate="06_CT_MIS_FOR_Man_01"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:12162"
FT   CDS             1..549
FT                   /codon_start=1
FT                   /product="p20 protein"
FT                   /note="forms inclusion bodies and play a role of
FT                   suppressors of RNA silencing"
FT                   /db_xref="InterPro:IPR021575"
FT                   /db_xref="InterPro:IPR021742"
FT                   /db_xref="UniProtKB/TrEMBL:I7EVF0"
FT                   /protein_id="AFP33073.1"
FT                   /translation="MRAYFSVNDYISLLAKVGAVVERLCDPSVTLTEVMDEINDFNSFL
FT                   ALVHSMKSDMNGDHQDGHHEMGEHKSRLLCNIEAKLRILLDIIRRRFTRDKLLCTSATD
FT                   VMGFFVMWYMSSSHTSFESVMRTELKLVVKAVLSDLSRAHKLDFSERAFAAYGILLQKG
FT                   TVATVCGQFDINLVSPSCV"
XX
SQ   Sequence 549 BP; 134 A; 114 C; 140 G; 161 T; 0 other;
     atgcgagctt actttagtgt taacgattac ataagccttt tggctaaggt cggcgcagtt        60
     gtggaacgtt tgtgcgatcc cagcgtaact ctcacggaag tgatggacga aattaatgat       120
     tttaactcgt ttctcgcttt ggtacactct atgaagtcgg acatgaacgg cgatcatcag       180
     gatggtcacc atgagatggg tgaacacaag tctcgattgt tgtgcaatat agaggcgaaa       240
     ctgcgaatac ttctcgatat cataagacgt cggtttactc gcgacaagct gctctgtacc       300
     agcgcaacag atgtcatggg cttcttcgtt atgtggtaca tgagttctag tcacaccagt       360
     ttcgagtccg taatgcgaac ggagctgaaa ttagtggtta aagcggtact gtcggattta       420
     tcccgcgcgc ataaactaga ttttagcgag cgagcctttg cggcttacgg tatccttttg       480
     caaaagggta ctgtagcgac cgtttgcggt cagtttgaca ttaatttagt ctctccatct       540
     tgcgtgtag                                                               549
//