ID JQ407084; SV 1; linear; genomic RNA; STD; VRL; 2813 BP. XX AC JQ407084; XX DT 23-DEC-2012 (Rel. 115, Created) DT 23-DEC-2012 (Rel. 115, Last updated, Version 1) XX DE Potato virus T isolate PER21 replicase gene, partial cds; and movement DE protein and coat protein genes, complete cds. XX KW . XX OS Potato virus T OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Tepovirus. XX RN [1] RP 1-2813 RA Silvestre R., Cuellar W.; RT "Sequence variability among PVT isolates"; RL Unpublished. XX RN [2] RP 1-2813 RA Silvestre R., Cuellar W.; RT ; RL Submitted (12-JAN-2012) to the INSDC. RL Crop Management and Production Systems Division, International Potato RL Center, La Molina 1895, Lima 12, Peru XX DR MD5; 7d869e5aeb1415b800e0fbec7e1ef928. XX FH Key Location/Qualifiers FH FT source 1..2813 FT /organism="Potato virus T" FT /host="Solanum andigenum" FT /isolate="PER21" FT /mol_type="genomic RNA" FT /country="Peru" FT /db_xref="taxon:36403" FT CDS <1..1353 FT /codon_start=1 FT /product="replicase" FT /note="contains replicase, RNA dependent RNA polymerase FT domain" FT /db_xref="GOA:K9MLV3" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:K9MLV3" FT /protein_id="AFV39909.1" FT /translation="REFITPSGWSKQFRDDKENVDWRNVSYADAFETIYPKHEASDDIT FT LWAAIQKRIVMADPFRNAMKLQKVEPISAEIFNEMNKILLLNPHVSVDRDQVYKEFLRK FT RLNKSKKLIESHSERSSDDWPIDHFFLFMKSQLCTKFEKRFVDAKAGQTLACFSHKLLT FT RFGPAFREFEKKFTANLPPSWYIHTMENFDQLNNWVINYVDQEEGTESDYEAFDRSQDA FT IILGLEIECLKLFGWDQDLIDDYRKLKLWMGCRLGAIAITRFTGEFGTFFFNTIANIAF FT TCLRYNVTRDTVIAFAGDDMYASGKLEIRKDREDLLAHLTLKAKVQFTEKPMFCGWYIK FT KMGIVKEPRLVLERWLIAERKEVIDQCFINYSIEVSYGYRLGEYLWEYFDNLEDFQAIV FT RLVVKKKKQLPPAIRRIFETSNGIDFSGEVQETVGGEGEHHGSCGLWCNLH" FT CDS 1262..2338 FT /codon_start=1 FT /product="movement protein" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:K9MLA5" FT /protein_id="AFV39908.1" FT /translation="MELISVEKFRRQWEEKESITGPVDSGAIYTNSAFHNLKTKWHVYK FT SECSIGLDMSDNGKIISKDIPLFDQEEIDNIMKDDKQVFVHLGAFVFGLVAHFPVDEEV FT EGLVSIIVKRRTDLRRATLACRKIKFVNGRCAFMMKPNFSVRKEDLRDGDTFCAAIKIK FT NLGFEGGFFPFSACGGVIYRTSNVSFAHAVDKTFASRTVHDLVGTDVLSLDQLDQATLE FT DLEEVRRSPILRLTAPDERVMIERGNWFQKKPAIRRRSFGKRRPQRCSSVRSASLPRFS FT CSEKLERGFESESLAGLVLDQKYGPNNLCADKRRSPESDSGSLQQSMGQSSHSGSEGWS FT KGADVTIPLRKNRNIFSE" FT CDS 2172..2813 FT /codon_start=1 FT /product="coat protein" FT /note="viral capsid" FT /db_xref="GOA:K9MJZ5" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:K9MJZ5" FT /protein_id="AFV39907.1" FT /translation="MDPTTFVQTRDEVLNLTVAAYSSQWDSQATQALKDGAKGQMLRFL FT FGRIAISSASRNTIWPDTEIASEDLQIGMSAASAGPPPVAAAPISLIFRVNFNSYVKML FT IALSNTSTNSFVKNKTLRQMCVPFAKYAYGYLSEMGYATWAYEKMPKLCRKAKWVAFDF FT ASGLLIDTTMQLNDDEKTVIQGLGARLFKTQQSIQIADSTMDGEAINREI" XX SQ Sequence 2813 BP; 879 A; 489 C; 695 G; 750 T; 0 other; agagagttta taactccaag tggatggagc aaacaattca gggatgataa agaaaatgta 60 gactggagaa atgtctcata tgctgatgct tttgaaacga tttatcccaa acatgaggca 120 agtgatgata taaccctgtg ggccgccatt caaaagagaa tcgtaatggc ggatccattc 180 agaaatgcaa tgaaattgca aaaagttgaa ccaatctcag ctgagatttt taatgaaatg 240 aataaaatac ttctcttgaa tccacatgtg agtgttgata gggatcaggt ctacaaggag 300 ttcttgagaa agagattaaa caaatcaaag aagttgatag aatcccattc tgaaagatca 360 tctgatgatt ggccgataga ccacttcttt ctgttcatga agagccagct atgcacaaag 420 tttgagaaga ggtttgtgga tgcaaaggct ggtcaaacac tggcttgttt ctcgcacaag 480 ttactgacaa gattcggacc tgctttcaga gaatttgaaa agaagttcac agcaaatttg 540 ccaccatcat ggtacattca cacgatggag aacttcgatc aactgaacaa ctgggtcatt 600 aactatgttg atcaggaaga gggcaccgaa tctgattatg aagctttcga tagatcacag 660 gatgcaatca ttctaggtct tgagattgaa tgtctgaaat tgtttggatg ggatcaagat 720 ctgattgatg attacagaaa gctgaagctc tggatgggat gtagattggg ggcaattgcg 780 attacgagat tcacaggtga atttggaaca ttcttcttca acacaattgc aaatatcgcg 840 ttcacatgtt tgaggtataa cgtcactaga gacactgtga ttgcgtttgc aggagatgac 900 atgtatgcat ccggaaaact cgaaatcagg aaagatagag aggacttgct ggcccatcta 960 actttaaagg caaaagtgca attcacagaa aagccaatgt tttgtgggtg gtacatcaaa 1020 aagatgggaa ttgtgaaaga gccaagattg gtgcttgaga ggtggttgat agctgaaaga 1080 aaggaggtga tagatcaatg cttcatcaac tactcaattg aagtatctta tggatacaga 1140 ttaggtgagt acctctggga gtattttgat aatttagagg atttccaggc aatagtgaga 1200 ttggtagtaa agaagaagaa gcaattacca ccagctataa gaagaatctt tgagacgagt 1260 aatggaattg atttcagtgg agaagttcag gagacagtgg gaggagaagg agagcatcac 1320 gggtcctgtg gactctggtg caatctacac taactccgca tttcacaatc tgaagaccaa 1380 atggcacgtt tacaagtctg agtgcagcat tggtcttgat atgtccgata acggaaaaat 1440 aatatcaaag gacatccccc tttttgatca agaggagatt gacaacatta tgaaggacga 1500 taaacaagta tttgtccatc tgggagcctt tgtgttcgga cttgttgcac actttcctgt 1560 cgatgaggaa gtggaaggat tggtctctat cattgtcaaa cgtcgaactg acctgagaag 1620 ggcaactcta gcttgcagga agatcaaatt tgtgaatgga agatgcgctt tcatgatgaa 1680 accaaacttt tcagttagaa aggaggattt gagggatggt gacacctttt gtgctgctat 1740 caaaatcaaa aatcttggct ttgagggcgg gttctttcca ttctcagcat gcggtggagt 1800 gatttacaga acctcaaatg tgagttttgc gcatgctgtt gacaaaacct tcgcttctag 1860 aactgtccat gacttggtag gtactgatgt actctctttg gatcaactgg atcaagctac 1920 tctggaggac cttgaggaag tgagaagaag ccccatctta aggttgaccg ctcctgatga 1980 gagagtgatg atagagagag ggaattggtt ccagaagaag ccggcaataa ggaggagaag 2040 ctttgggaaa aggaggcccc aaagatgttc gtcagttagg tcggcgagtt tgcctcgatt 2100 ttcatgttct gagaaattag aaagaggctt tgaatcagag agtctggctg gattagtgct 2160 agatcaaaaa tatggaccca acaacctttg tgcagacaag agacgaagtc ctgaatctga 2220 cagtggcagc ttacagcagt caatgggaca gtcaagccac tcaggctctg aaggatggag 2280 caaaggggca gatgttacga ttcctcttcg gaagaatcgc aatatcttca gcgagtagaa 2340 acactatctg gcctgacacg gagatcgcgt cggaggatct tcaaataggc atgtcagcgg 2400 cttcagcagg tccacctcca gtggctgctg ctccgataag ccttatattt agggtaaatt 2460 ttaattctta tgttaaaatg ctaatagctt tatccaacac ctcaacaaat tcctttgtca 2520 agaataaaac actcagacag atgtgtgtgc cttttgcaaa gtatgcttat ggatacttat 2580 ctgaaatggg ttatgcaact tgggcatatg agaaaatgcc caagctttgt cgaaaggcca 2640 aatgggttgc tttcgatttc gcatctgggt tgttgattga cacaacaatg caattgaatg 2700 atgatgaaaa gaccgtcatt caaggtctgg gagctaggct gttcaaaact caacagtcca 2760 ttcaaattgc tgattctaca atggatggtg aagctatcaa tcgtgaaatt tga 2813 //