ID   JQ405265; SV 1; linear; genomic RNA; STD; VRL; 1072 BP.
XX
AC   JQ405265;
XX
DT   28-FEB-2012 (Rel. 111, Created)
DT   28-FEB-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Alternanthera mosaic virus clone PGL38 TGB2 gene, partial cds; and TGB3 and
DE   coat protein genes, complete cds.
XX
KW   .
XX
OS   Alternanthera mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-1072
RA   Hammond J., Reinsel M.D.;
RT   "Variability of Alternanthera Mosaic Virus Isolates";
RL   Unpublished.
XX
RN   [2]
RP   1-1072
RA   Hammond J., Reinsel M.D.;
RT   ;
RL   Submitted (11-JAN-2012) to the INSDC.
RL   Floral and Nursery Plants Research Unit, U.S. Dept. of Agriculture, 10300
RL   Baltimore Avenue, Beltsville, MD 20705, USA
XX
DR   MD5; 34fa010a283e4e879ff4e650698f8f6c.
DR   EuropePMC; PMC3560364; 23386854.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1072
FT                   /organism="Alternanthera mosaic virus"
FT                   /host="Phlox carolina angusta"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="2009"
FT                   /clone="PGL38"
FT                   /db_xref="taxon:85454"
FT   CDS             <1..153
FT                   /codon_start=1
FT                   /product="TGB2"
FT                   /db_xref="GOA:H6X0Z8"
FT                   /db_xref="UniProtKB/TrEMBL:H6X0Z8"
FT                   /protein_id="AFB81316.1"
FT                   /translation="SIHYNSPRAQSQISGASPFLIILILSALIYALSCRGGHHRARLHR
FT                   CPCCS"
FT   CDS             89..280
FT                   /codon_start=1
FT                   /product="TGB3"
FT                   /db_xref="InterPro:IPR003411"
FT                   /db_xref="UniProtKB/TrEMBL:Q52Z67"
FT                   /protein_id="AFB81317.1"
FT                   /translation="MPYLVEAAITVLACIGVLAALRPGSHPCTILLTGHSATISGDCGP
FT                   VAPETIRALGDYLTGLRF"
FT   CDS             323..946
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H6X100"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:H6X100"
FT                   /protein_id="AFB81318.1"
FT                   /translation="MSTPFPQVTQEQMNAFTPHATSNLLPSPEQLTTIASLLVAAKVPA
FT                   ASTTTIALELVNFCYDNGSSTYTAVVGPSSLAEVSLSQVANIVKASGTSLRKFCRFFAP
FT                   IIWNLRTDKMPPANWEANGFKPTEKFAAFDFFDGVENPAAMQPPGGLVRTPSQAERIAN
FT                   ATNKQVNLFQAAAQDNNLASNSAFITKGQLSSNSPTIQYLPPPE"
FT   3'UTR           947..1072
XX
SQ   Sequence 1072 BP; 252 A; 335 C; 221 G; 264 T; 0 other;
     agcatccact acaattcgcc tagggcccag agtcagatct caggcgcatc accgttcctg        60
     atcatcctga tactctcagc cctcatctat gccctatctt gtagaggcgg ccatcaccgt       120
     gctcgcttgc ataggtgtcc ttgctgctct taggccaggg tcccatccct gcaccattct       180
     gctaactgga cactctgcga ccatcagcgg agattgcgga cccgttgcac cagagaccat       240
     cagggctctt ggagactatt taaccgggct taggttttag cattagtttg attatcctat       300
     tatcatccta gttaaagtca tcatgtctac accatttcct caagtcaccc aggaacagat       360
     gaacgctttc actccacatg ccacatccaa cctccttcca tcaccggagc agttgaccac       420
     cattgccagt ctcttggttg ctgccaaggt gcctgccgcc tcaaccacaa ccattgccct       480
     ggagcttgtt aacttctgtt atgacaatgg ctccagtacc tacacagcgg tggtgggccc       540
     ttcttcactt gcagaggtct cactctccca ggtcgccaac atcgtcaaag cctcaggcac       600
     ctctctccgc aaattctgca gattctttgc tccaatcatc tggaacctca gaacagacaa       660
     gatgccccca gccaactggg aagcgaatgg gttcaaaccg acagagaagt ttgcagcctt       720
     cgatttcttc gatggagtgg agaatccggc ggccatgcag ccaccaggag ggctggttag       780
     gactcccagc caagcagaaa ggatcgccaa cgccactaac aagcaggtga acctctttca       840
     ggccgcggca caggacaata acctcgccag caactctgca ttcatcacca agggccaatt       900
     gtcttccaac tcaccaacca ttcaatacct cccaccacct gagtgatttc tccacccagt       960
     ccaagcccgt tgttttcgca attttgttgg ggctatcgag ttttcaaaat tgcttccgct      1020
     tctgtagacc taaattacag cctagtgtgc ggtttaatac ctatttacgc ac              1072
//