ID JQ394886; SV 1; linear; genomic RNA; STD; VRL; 2816 BP. XX AC JQ394886; XX DT 23-DEC-2012 (Rel. 115, Created) DT 23-DEC-2012 (Rel. 115, Last updated, Version 1) XX DE Potato virus T isolate BOL27 replicase gene, partial cds; and movement DE protein and coat protein genes, complete cds. XX KW . XX OS Potato virus T OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Tepovirus. XX RN [1] RP 1-2816 RA Silvestre R., Cuellar W.; RT "Sequence variability among PVT isolates"; RL Unpublished. XX RN [2] RP 1-2816 RA Silvestre R., Cuellar W.; RT ; RL Submitted (11-JAN-2012) to the INSDC. RL Crop Management and Production Systems Division, International Potato RL Center, La Molina 1895, Lima 12, Peru XX DR MD5; 5ee14d8e82d5ea7cde5b3d9eb46aa70b. DR EuropePMC; PMC6256546; 30533781. XX FH Key Location/Qualifiers FH FT source 1..2816 FT /organism="Potato virus T" FT /host="Solanum andigenum" FT /isolate="BOL27" FT /mol_type="genomic RNA" FT /country="Bolivia" FT /db_xref="taxon:36403" FT CDS <1..1356 FT /codon_start=1 FT /product="replicase" FT /note="contains replicase, RNA dependent RNA polymerase FT domain" FT /db_xref="GOA:K9MLA1" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:K9MLA1" FT /protein_id="AFV39903.1" FT /translation="DREFITPSGWSKQFRDDKENVDWRNVSYADAFETIYPKHEASDDI FT TLWAAIQKRIVMADPFRNAIKLQKVEPISAEIFNEMNKILLLNPHVSVDRDQVYKEFLR FT KRLNKSKKLIESHSERSSDDWPIDHFFLFMKSQLCTKFEKRFVDAKAGQTLACFSHKLL FT TRFGPAFREFEKKFTANLPPSWYIHTMKNFDQLNNWVINYVDQEEGTESDYEAFDRSQD FT AIILGLEIECLKLFGWDQDLIDDYKKLKLWMGCRLGAIAIMRFTGEFGTFFFNTIANIA FT FTCLRYNITRDTVIAFAGDDMYASGKLEIRKDREDLLAHLTLKAKVQFTEKPMFCGWYI FT KRTGIVKEPRLVLERWLIAERKKVIDQCFINYSIEVSYGYRLGEYLWEYFDNLEDFQAI FT VRLVIKKKKQLPPAVRRIFETSNGVDFGGEVQETMGGEGEHHGSCGLWCNLH" FT CDS 1265..2341 FT /codon_start=1 FT /product="movement protein" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:K9MJY9" FT /protein_id="AFV39902.1" FT /translation="MELISVEKFRRQWEEKESITGPVDSGAIYTNSAFHNLKTKWHVYK FT SECSIGLDLPDNGKIISKDIPLFDQEEIDNIMKDDKQVFVHLGAFVFGLVAHFPVDEEV FT EGLVSIIDKRRTDLRRATLACRKIKFMNGRCAFMMKPNFSVRKEDLRDGDTFCAAIKIK FT NLGFEGGFFPFSACGGVIYRTSNVSFAHAVDKTFASRTVHDLVGTDILSLDQLDQATLE FT DLEEVRKSPILRLTAPDERVMIERGNWFQKEPAIRRRSFGKRRPQRCSSVRSASLPRFS FT CSERLDRGFESESLAGLVLDQKYGPNNFCADKRRSPESDSGSLQQSMGQSSHSGSEGWG FT KGTDVAIPLRKNRNIFSE" FT CDS 2175..2816 FT /codon_start=1 FT /product="coat protein" FT /note="viral capsid" FT /db_xref="GOA:K9MM02" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:K9MM02" FT /protein_id="AFV39901.1" FT /translation="MDPTTFVQIRDEVLNLTVAAYSSQWDSQATRALKDGAKEQMLRFL FT FGRIAISSASRNTIWPDTEIASEDLQIGMSVASVGPPPVAAAPISLVFRVNFNSYVKML FT IALSNTSTNSFVRNKTLRQMCMPFAKYAYGYLSEMGYATWAYEKMPKLCRKAKWVAFDF FT ASGLLIDTTMQLNDDEKTVIQGLGARLFKTQQSIQIADSTMDGEAINREI" XX SQ Sequence 2816 BP; 882 A; 484 C; 694 G; 756 T; 0 other; gatagggagt tcataactcc aagtggatgg agcaaacaat tcagggatga taaagaaaat 60 gtggactgga gaaatgtctc atacgctgat gcttttgaga caatttatcc aaaacatgag 120 gcaagtgatg atataaccct gtgggccgcc attcaaaaaa gaatcgtaat ggcagatcca 180 ttcagaaatg caataaaatt gcaaaaagtg gaaccaattt cagctgagat tttcaatgaa 240 atgaataaaa tacttctctt gaatccacat gtgagtgttg atagggatca ggtctacaaa 300 gagttcctga gaaagaggtt aaacaagtca aaaaagttga tagaatctca ctctgaaagg 360 tcatctgatg attggccaat agatcacttt ttcctgttca tgaaaagcca gctatgtaca 420 aaatttgaga agaggtttgt agatgcaaag gctggtcaga cactggcttg tttctcacac 480 aagttattga caagatttgg acctgctttt agagagtttg aaaagaagtt cacagcaaat 540 ttgccgccat catggtacat tcacacaatg aagaatttcg atcaactgaa caattgggtc 600 attaactacg ttgatcaaga ggagggcact gagtctgatt atgaagcttt cgatagatca 660 caggatgcaa tcattctagg tcttgaaatt gaatgtctga aattgtttgg atgggatcaa 720 gacctgatag atgattacaa aaagctgaag ctttggatgg gatgtagact gggagcaatt 780 gcaattatgc gattcacagg cgaatttgga acattctttt tcaacacaat tgcaaacatc 840 gcattcacat gtttgaggta taacatcact agagacactg tgattgcgtt tgcaggagat 900 gacatgtatg catccggaaa actcgagatc aggaaagata gagaggacct gctggcccat 960 ctaactttaa aggcaaaagt gcagttcaca gaaaagccaa tgttttgtgg gtggtacatt 1020 aagaggacgg gaattgttaa ggagccaaga ttggtgcttg agaggtggtt gatagctgaa 1080 aggaagaagg tgatagatca atgcttcatc aactactcaa ttgaagtatc ttatggatac 1140 agattaggtg agtacctctg ggagtatttt gataatttag aggatttcca agcaatagtg 1200 agattggtga taaagaagaa gaagcaattg ccaccagctg taagaagaat ttttgagaca 1260 agcaatggag ttgatttcgg tggagaagtt caggagacaa tgggaggaga aggagagcat 1320 cacgggtcct gtggactctg gtgcaatcta cactaactcc gcatttcata atctgaagac 1380 caaatggcac gtttacaagt ctgagtgcag cattggtctt gatttgcccg ataacggaaa 1440 gattatatca aaggacatcc ccctctttga tcaggaggag attgacaaca tcatgaagga 1500 cgacaagcaa gtatttgtcc atctgggagc ctttgtgttt ggacttgttg cacactttcc 1560 tgtcgatgag gaagtggaag gattggtctc tatcattgac aaacgtcgga ctgacctgag 1620 gagagcaact ctagcatgca ggaaaatcaa atttatgaac ggaagatgcg ctttcatgat 1680 gaaaccaaac ttttcagtta gaaaggagga cttgagagat ggcgacactt tttgtgctgc 1740 catcaaaatc aaaaatcttg gctttgaagg agggttcttt ccattttcag cctgtggcgg 1800 agtaatttac agaacctcaa acgtgagttt tgcgcatgct gtcgataaaa cctttgcttc 1860 taggactgtt catgatttgg tgggtactga tatactctct ttggatcaac ttgatcaagc 1920 cactctggag gaccttgagg aggtgagaaa aagccccatt ctgaggttaa ctgccccaga 1980 cgaaagagtg atgatagaga gagggaattg gttccaaaag gaaccggcaa taaggaggag 2040 aagttttggg aaaaggagac cccaaagatg ctcgtcagtt aggtcggcga gtttgcctcg 2100 attttcatgt tctgagaggt tagatagagg ttttgaatca gagagtttgg ctggattggt 2160 attagatcag aaatatggac ccaacaactt ttgtgcagat aagagacgaa gtcctgaatc 2220 tgacagtggc agcttacagc agtcaatggg acagtcaagc cactcgggct ctgaaggatg 2280 gggcaaagga acagatgttg cgattcctct tcggaagaat cgcaatatct tcagcgagta 2340 gaaacaccat ctggcctgac acggagatcg catcggagga tcttcagata ggtatgtcag 2400 tggcttcagt gggtccacct ccagtggctg ctgctccgat aagccttgta tttagggtaa 2460 attttaattc ttatgttaaa atgctaatag ctttgtccaa cacctcaaca aattcctttg 2520 tcaggaataa aacactcaga caaatgtgta tgccttttgc aaaatatgct tatggatact 2580 tatctgaaat gggctatgca acttgggcat atgagaaaat gcccaaactt tgtcggaagg 2640 ctaaatgggt tgctttcgac tttgcatctg ggttgttgat tgatacaaca atgcaattga 2700 atgatgatga aaagaccgtc attcaaggtc tgggagctag gttgttcaaa actcaacagt 2760 ccattcaaat tgctgattcc acaatggacg gtgaagctat caatcgtgaa atttga 2816 //