ID JQ394885; SV 1; linear; genomic RNA; STD; VRL; 2813 BP. XX AC JQ394885; XX DT 23-DEC-2012 (Rel. 115, Created) DT 23-DEC-2012 (Rel. 115, Last updated, Version 1) XX DE Potato virus T isolate BOL20 replicase gene, partial cds; and movement DE protein and coat protein genes, complete cds. XX KW . XX OS Potato virus T OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Tepovirus. XX RN [1] RP 1-2813 RA Silvestre R., Cuellar W.; RT "Sequence variability among PVT isolates"; RL Unpublished. XX RN [2] RP 1-2813 RA Silvestre R., Cuellar W.; RT ; RL Submitted (11-JAN-2012) to the INSDC. RL Crop Management and Production Systems Division, International Potato RL Center, La Molina 1895, Lima 12, Peru XX DR MD5; 6d504e72468f32c5550ccd96bf401446. DR EuropePMC; PMC6256546; 30533781. XX FH Key Location/Qualifiers FH FT source 1..2813 FT /organism="Potato virus T" FT /host="Solanum andigenum" FT /isolate="BOL20" FT /mol_type="genomic RNA" FT /country="Bolivia" FT /db_xref="taxon:36403" FT CDS <1..1353 FT /codon_start=1 FT /product="replicase" FT /note="contains replicase, RNA dependent RNA polymerase FT domain" FT /db_xref="GOA:K9ML28" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:K9ML28" FT /protein_id="AFV39900.1" FT /translation="REFITPSGWSKQFRDDKENVDWRNVSYADAFETIYPKHEASDDIT FT LWAAIQKRIVMADPFRNAMKLQKVEPISAEIFNEMNKILLLNPHVSVDRDQVYKEFLRK FT RSNKSKKLIESHSERSSDDWPIDHFFLFMKSQLCTKFEKRFVDAKAGQTLACFSHKLLT FT RFGPAFREFEKKFTANLPPSWYIHTMKNFDQLNNWVINYVDQEEGTESDYEAFDRSQDA FT IILGLEIECLKLFGWDQDLIDDYRKLKLWMGCRLGAIAIMRFTGEFGTFFFNTIANIAF FT TCLRYNITRDTVIAFAGDDMYASGKLEIRKDREDLLAHLTLKAKVQFTDKPMFCGWYIK FT KMGIVKEPRLVLERWLIAERKKVIDQCFINYSIEVSYGYRLGEYLWEYFDNLEDFQAIV FT RLVVKKKKQLPPAIRRIFETSNGIDSSGEVQETMGGEGEHHGSCGLWCNLH" FT CDS 1262..2338 FT /codon_start=1 FT /product="movement protein" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:K9MLU8" FT /protein_id="AFV39899.1" FT /translation="MELIPVEKFRRQWGEKESITGPVDSGAIYTNSAFHNLKTKWHVYK FT SECSIGLDLPDNGKIISKDIPLFDQEEIDNIIKDDKQVFVHLGAFVFGLVAHFPVDEEV FT EGLVSIIDKRRTDLRRATLACRKIKFVNGRCAFMMKPNFSVRKEDLRDGDTLCAAIKIK FT NLGFEGGFFPFSACGGVIYRTSNVSFAHAVDKTFASRTVHDLVGTDILSLDQLDQATLE FT DLEEVRKSPILRLTAPDERVMIERGNWFHKKPAIRRRSFGKRRPQRCSSVRSASLPRFS FT CSERLEGGSESEGLAGLVLDQKYGPNNFCADKRRSPKSDSGSLQQSMGQSSHSGSEGWG FT KGADAAIPLRKNRNIFSE" FT CDS 2172..2813 FT /codon_start=1 FT /product="coat protein" FT /note="viral capsid" FT /db_xref="GOA:K9ML97" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:K9ML97" FT /protein_id="AFV39898.1" FT /translation="MDPTTFVQIRDEVLNLTVAAYSSQWDSQATQALKDGAKEQMLRFL FT FGRIAISSASRNTIWPDTEVSSENLQIGMSAASAGPPPVAAAPVSLTFRVNFNSYVKML FT IALSNTSTNSFVKNKTLRQMCVPFAKYAYGYLSEMGYATWAYEKMPKLCRKAKWVAFDF FT ASGLLIDTTMQLNDDEKTVIQGLGARLFKTQQSIQIADSTMDGEAINREI" XX SQ Sequence 2813 BP; 870 A; 496 C; 699 G; 748 T; 0 other; agagagttca taactccaag tggatggagc aaacaattca gggatgataa agagaatgtg 60 gattggagaa atgtttcata tgctgatgct tttgaaacaa tttacccaaa acatgaggcg 120 agtgatgaca taaccctgtg ggctgctatt caaaaaagaa ttgtcatggc ggatccattc 180 aggaatgcga tgaaactgca aaaagttgag ccaatctcgg ctgagatttt caatgaaatg 240 aacaaaatac ttctcttaaa cccacatgtg agtgtcgata gggatcaggt ctataaagag 300 ttcttgagaa agaggtcgaa taaatcaaag aagttgatag aatctcactc tgaaaggtca 360 tctgacgatt ggccaataga tcactttttc ctgttcatga agagccaatt gtgcacaaaa 420 tttgaaaaga ggtttgtgga tgcaaaggct ggtcaaacac tggcttgttt ctcacacaag 480 ttgctaacaa gatttggacc tgcttttaga gaatttgaaa agaagttcac agcaaattta 540 ccaccatcat ggtacattca cacaatgaag aatttcgatc agctgaacaa ctgggtcatc 600 aactacgtcg atcaggaaga gggcactgaa tctgattatg aagcttttga cagatcacag 660 gatgcaatca ttctaggtct tgaaattgag tgtttaaagc tgtttggatg ggaccaagac 720 ttgattgatg attacagaaa gttaaagctc tggatggggt gcaggctggg tgcaattgca 780 atcatgagat tcacaggtga atttgggaca ttctttttca acacaattgc aaacatagca 840 ttcacctgtt tgaggtacaa catcactaga gacacagtga tcgcgtttgc gggagatgac 900 atgtacgcat ccggaaaact tgagatcagg aaagatagag aggacttgtt ggcccaccta 960 actttgaaag caaaagtgca attcacagac aaaccaatgt tttgcgggtg gtacattaaa 1020 aagatgggaa ttgtaaagga accgagattg gtgctcgaaa ggtggttgat cgctgaaagg 1080 aagaaggtga tagatcaatg ctttatcaac tactcaattg aggtatctta tggatacagg 1140 ttaggtgagt acctctggga gtattttgat aatttagagg atttccaagc aatagtgagg 1200 ttggtggtaa agaagaaaaa gcaattgcca ccagctataa gaagaatttt tgagacgagc 1260 aatggaattg attccagtgg agaagttcag gagacaatgg ggggagaagg agagcatcac 1320 gggtcctgtg gactctggtg caatctacac taactccgca tttcacaatc tgaagaccaa 1380 atggcacgtt tacaagtctg agtgcagcat tggtcttgat ttgcccgata atggaaaaat 1440 aatatcaaag gacatccccc tctttgacca ggaggaaatt gataacatta taaaagatga 1500 caaacaagtg ttcgtccatc tgggagcttt tgtgttcgga cttgttgcac actttcctgt 1560 cgatgaggaa gtggaagggt tagtctctat cattgacaaa cgtcgaaccg acttgagaag 1620 agcaacttta gcgtgcagaa aaatcaagtt tgtgaatgga agatgtgctt ttatgatgaa 1680 accaaacttt tcagtcagaa aggaggacct aagggatggt gacactctct gtgctgccat 1740 caaaatcaaa aatctcggct ttgaaggggg tttctttcca ttctcagcct gtggcggagt 1800 gatttacaga acctcgaacg tgagttttgc acatgctgtt gacaagactt tcgcttctag 1860 gactgttcat gacttggtgg gtaccgatat actctctttg gatcaattgg atcaagccac 1920 tctggaggac cttgaagagg tgagaaaaag ccctattcta aggttgactg ccccggatga 1980 gagagtgatg atagagagag gaaattggtt ccataagaaa ccagcgataa ggagaagaag 2040 ctttgggaag aggagacccc aaagatgttc gtcagttagg tcggcgagtt tgcctcgatt 2100 ttcatgttct gagaggttag agggaggctc tgaatctgag ggtttggctg gattggtgtt 2160 agatcagaaa tatggaccca acaacttttg tgcagataag agacgaagtc ctaaatctga 2220 cagtggcagc ttacagcagt caatgggaca gtcaagccac tcaggctctg aaggatgggg 2280 caaaggagca gatgctgcga ttcctcttcg gaagaatcgc aatatcttca gcgagtagaa 2340 acaccatttg gcctgacacg gaggtttcat cggagaatct ccaaataggc atgtctgcgg 2400 cttcagcagg tccacctcca gtggctgccg ctccggtaag ccttacattt agggtaaact 2460 ttaattctta tgttaaaatg ttgatagctt tatccaacac ttcgacaaat tcttttgtca 2520 aaaacaaaac actcagacaa atgtgtgtgc cttttgcaaa gtatgcttat ggatacttgt 2580 ctgaaatggg ttatgcaact tgggcatatg agaaaatgcc caagctctgt cgaaaggcta 2640 aatgggttgc tttcgatttt gcatctgggt tgttgattga tacaacaatg caattgaatg 2700 acgatgaaaa gaccgttatt caaggtctgg gggctaggtt gttcaaaact cagcagtcca 2760 ttcaaattgc tgattccaca atggatggtg aagctatcaa tcgtgaaatt tga 2813 //