ID JQ394883; SV 1; linear; genomic RNA; STD; VRL; 2816 BP. XX AC JQ394883; XX DT 23-DEC-2012 (Rel. 115, Created) DT 23-DEC-2012 (Rel. 115, Last updated, Version 1) XX DE Potato virus T isolate PER14 replicase gene, partial cds; and movement DE protein and coat protein genes, complete cds. XX KW . XX OS Potato virus T OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Tepovirus. XX RN [1] RP 1-2816 RA Silvestre R., Cuellar W.; RT "Sequence variability among PVT isolates"; RL Unpublished. XX RN [2] RP 1-2816 RA Silvestre R., Cuellar W.; RT ; RL Submitted (10-JAN-2012) to the INSDC. RL Crop Management and Production Systems Division, International Potato RL Center, La Molina 1895, Lima 12, Peru XX DR MD5; 66bd68b4a8d5ffd875ddbe2bbdb53170. DR EuropePMC; PMC6256546; 30533781. XX FH Key Location/Qualifiers FH FT source 1..2816 FT /organism="Potato virus T" FT /host="Solanum andigenum" FT /isolate="PER14" FT /mol_type="genomic RNA" FT /country="Peru" FT /db_xref="taxon:36403" FT CDS <1..1356 FT /codon_start=1 FT /product="replicase" FT /note="contains replicase, RNA dependent RNA polymerase FT domain" FT /db_xref="GOA:K9MLU5" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:K9MLU5" FT /protein_id="AFV39894.1" FT /translation="DREFITPSGWSKQFRDDKENVDWRNVSYADAFETIYPKHEASDDI FT TLWAAIQKRIVMADPFRNAMKLQKVESISAEISNEMNKILPLNPHVSVDRDQVYKEFLR FT KRLNKSKKLIESHSERSSDDWPIDHFFLFMKSQLCTKFEKRFVDAKAGQTLACFSHKLL FT TRFGPAFREFEKKFTANLPPSWYIHTMKNFDQLNNWVINYVDQEEGTESDYEAFDRSQD FT AIILGLEIECLKLFGWDQDLIDDYRKLKLWMGCRLGAIATMRFTGEFGTFFFNTIANIA FT FTCLRYNITRDTVIAFAGDDMYASGKLEIRKDREDLLAHLTLKAKVQFTDKPMFCGWYI FT KKMGIVKEPRLVLERWLIAERKKVIDQCFINYSIEVSYGYRLGEYLWEYFDNLEDFQAI FT VRLVIRKKRQLPPAIRRIFETSNGIDFSGEVQETMGGEGEHHGSCGLWCNLH" FT CDS 1265..2341 FT /codon_start=1 FT /product="movement protein" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:K9ML93" FT /protein_id="AFV39893.1" FT /translation="MELISVEKFRRQWEEKESITGPVDSGAIYTNSAFHNLKTKWHVYK FT SECSIGLDLPDNGKIISKDIPLFDQEEIDNIMKDDKQVFVHLGAFVFGLVAHFPVDEEV FT EGLVSIIDKRRTDLRRATLACRKIKFMNGRCAFMMKPNFSVRKEDLRDGDTFCAAIKIK FT NLGFEGGFFPFSACGGVIYRTSNVSFAHAVDKTFASRTVHDLVGTDILSLDQLDQATLE FT DLEEVRKSPILRLTAPDERVMIERGNWFQKKPAIRRRSFGKRRPQRCSSVRSASLPRFS FT CSERLDRGFESESLAGLVLDQKYGPNNFCADKRRSPESDSGSLQQSMGQSSHSGSEEWS FT KGADAAIPLRKNRNIFSE" FT CDS 2175..2816 FT /codon_start=1 FT /product="coat protein" FT /note="viral capsid" FT /db_xref="GOA:K9MJX7" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:K9MJX7" FT /protein_id="AFV39892.1" FT /translation="MDPTTFVQIRDEVLNLTVAAYSSQWDSQATQALKNGAKEQMLRFL FT FGXIAISSASRNTIWPDTEISSEDLQIGMSAASAGPPPVAAAPISLIFRVNFNSYVKML FT IALSNTSTNSFVKNKTLRQMCMPFAKYAYGYLSEMGYATWAYEKMPKLCRKAKWVAFDF FT ASGLLIDTTMQLNDDEKTVIQGLGARLFKTQQSIQIADSTMDGEAINREI" XX SQ Sequence 2816 BP; 878 A; 495 C; 692 G; 750 T; 1 other; gacagggagt tcataacccc aagtggttgg agcaaacaat tcagggatga caaagaaaat 60 gtggactgga gaaatgtctc atatgctgat gcttttgaaa caatctatcc aaaacatgag 120 gcaagtgatg atataaccct atgggctgct atccagaaaa gaattgtcat ggcggatccg 180 ttcagaaatg caatgaagct gcagaaagtt gagtcaatct cagctgagat ttccaatgaa 240 atgaacaaaa tacttccctt gaatccacat gtgagtgttg atagggatca ggtctataaa 300 gagtttctga gaaagaggtt gaataaatca aagaaattaa tagagtctca ctctgaaaga 360 tcatctgatg actggccaat agaccacttt ttcctgttta tgaagagcca gttgtgtacg 420 aaatttgaaa agaggttcgt ggatgcaaaa gctggtcaaa cactggcttg tttctcacac 480 aagttgctaa caagatttgg acctgctttt agagaatttg aaaagaagtt cacggcaaat 540 ttgccaccat cgtggtacat ccacacgatg aaaaatttcg accagctgaa caactgggtc 600 attaactatg ttgatcagga agagggcact gaatctgatt atgaagcttt cgacagatca 660 caagatgcaa tcatcctagg gcttgagatt gagtgcctaa agttgtttgg atgggatcaa 720 gacctgattg atgattatag aaagttgaag ctctggatgg gatgtagatt gggtgcaatt 780 gcaactatga gattcacagg tgaattcggg acgttcttct tcaatacaat tgcaaacatc 840 gcattcacat gtctgaggta taacattact agagacaccg taattgcgtt tgcgggagat 900 gacatgtatg catctggaaa acttgaaatc aggaaagaca gagaggactt gttggcccat 960 ctaactctca aagcaaaagt gcagttcaca gacaagccaa tgttttgtgg gtggtacatt 1020 aaaaagatgg gaattgtgaa agaaccaaga ttagtgcttg aaaggtggtt gatagctgaa 1080 aggaaaaagg tgatagatca atgtttcatc aactactcaa ttgaggtatc ttatggatac 1140 agattaggtg agtacctctg ggagtatttt gataatttag aggatttcca ggcaatagtg 1200 agattggtga taaggaagaa gagacagttg ccgccagcca taagaagaat ctttgagaca 1260 agcaatggaa ttgatttcag tggagaagtt caggagacaa tgggaggaga aggagagcat 1320 cacgggtcct gtggactctg gtgcaatcta cactaactcc gcatttcata atctgaagac 1380 caaatggcac gtttacaagt ctgagtgcag cattggtctt gatctgcccg ataacggaaa 1440 gattatatca aaggacatcc ccctctttga tcaggaggag attgacaaca tcatgaagga 1500 cgacaagcaa gtatttgtcc atctgggagc ctttgtgttt ggacttgttg cacactttcc 1560 tgtcgatgag gaagtggaag gattggtctc tatcattgac aaacgtcgga ctgacctgag 1620 gagagcaact ctagcatgca ggaaaatcaa atttatgaac ggaagatgcg ctttcatgat 1680 gaaaccaaac ttttcagtta gaaaggagga cttgagagat ggcgacactt tttgtgctgc 1740 catcaaaatc aaaaatcttg gctttgaagg agggttcttt ccattttcag cctgtggcgg 1800 agtaatttac agaacctcaa acgtgagttt tgcgcatgct gtcgataaaa cctttgcttc 1860 taggactgtt catgatttgg tgggtactga tatactctct ttggatcaac ttgatcaagc 1920 cactctggag gaccttgagg aggtgagaaa aagccccatt ctgaggttaa ctgccccaga 1980 cgaaagagtg atgatagaga gagggaattg gttccaaaag aaaccggcaa taaggaggag 2040 aagttttggg aaaaggagac cccaaagatg ttcgtcagtt aggtcggcga gtttgcctcg 2100 attttcatgt tctgagaggt tagatagagg ttttgaatca gagagtttgg ctggattggt 2160 attagatcag aaatatggac ccaacaactt ttgtgcagat aagagacgaa gtcctgaatc 2220 tgacagtggc agcttacagc agtcaatggg acagtcaagc cactcaggct ctgaagaatg 2280 gagcaaagga gcagatgctg cgattcctct tcggaaraat cgcaatatct tcagcgagta 2340 ggaacactat ctggcctgac acggagattt cgtcggagga tcttcaaata ggcatgtcag 2400 cggcttcagc aggtccacct ccagtggctg ctgctccgat aagccttata tttagagtga 2460 attttaattc ttatgttaaa atgctaatag ctttatctaa cacttcaaca aattcctttg 2520 tcaagaataa aacactcagg caaatgtgca tgccttttgc aaagtatgct tatggatact 2580 tatctgaaat gggttatgca acttgggcat atgagaaaat gcccaagctt tgccgaaagg 2640 ctaaatgggt tgctttcgat tttgcatctg ggttgttgat cgatacaaca atgcaactaa 2700 atgatgatga aaagaccgtc attcaaggtc tgggggccag gttgtttaaa actcagcagt 2760 ccattcaaat tgctgattcc acaatggacg gtgaagctat caatcgtgaa atttga 2816 //