ID   JQ394692; SV 1; linear; genomic RNA; STD; VRL; 1371 BP.
XX
AC   JQ394692;
XX
DT   25-APR-2012 (Rel. 112, Created)
DT   25-APR-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Papaya ringspot virus P isolate PRSV-P-G2-HCpro helper component proteinase
DE   gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus P
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1371
RA   Basavaraj Y.B., Jain R.K.;
RT   "Studies on genetic diversity of PRSV-P and -W populations from different
RT   hosts and locations of India";
RL   Unpublished.
XX
RN   [2]
RP   1-1371
RA   Basavaraj Y.B., Jain R.K.;
RT   ;
RL   Submitted (10-JAN-2012) to the INSDC.
RL   Division of Plant Pathology, Advanced Centre for Plant Virology, Indian
RL   Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012,
RL   India
XX
DR   MD5; 59faa03d5333e883bc61cbb1e06fcc4b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1371
FT                   /organism="Papaya ringspot virus P"
FT                   /host="Carica papaya"
FT                   /isolate="PRSV-P-G2-HCpro"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Gadag, Karnataka"
FT                   /isolation_source="leaf"
FT                   /collected_by="Basavaraj Y.B."
FT                   /collection_date="25-Jan-2011"
FT                   /db_xref="taxon:12206"
FT   CDS             <1..>1371
FT                   /codon_start=1
FT                   /product="helper component proteinase"
FT                   /note="HCpro"
FT                   /db_xref="GOA:I1V1U6"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:I1V1U6"
FT                   /protein_id="AFI25156.1"
FT                   /translation="NDVAEKFWLGFNRAFLRHRKPTDHTCTSDMDVTMCGEVAALATII
FT                   LLPCHKITCNTCMSKVKGRVIDEVGEELNCELERLRETLSSYGGSFGHVSTLLDQLNKV
FT                   LNARNMNDEAFKEIAKKIDAKKESPWTHMTAINNTLIKGSLATGYEFERASDNLREIVR
FT                   WHLKRTESIKAGSVESFRNKRSGKAHFNPALTCDNQLDRNGNFLWGERQYHAKRFFANY
FT                   FEKIDHSKGYEYYSQRQNPNGVRKIAIGNLIFSTNLERFRQQMVEHHIDQGPITRECIA
FT                   LRNNNYVHVCSCVTLDDGTPAISELKTPTKNHIVLGNSGDPKYVDLPTLESDSMYIAKK
FT                   GYCYMNIFLAMLINIPENEAKDFTKRVRDLVGSKLGEWPTMLDVATCANQLIIFHPDAA
FT                   NAELPRILVDHRQKTMHVIDSFGSVDSGYHILKANTVNQLIQFAREPLDSEMKHYIVG"
XX
SQ   Sequence 1371 BP; 438 A; 258 C; 311 G; 364 T; 0 other;
     aatgacgtgg ctgaaaaatt ctggctcggt ttcaataggg cttttctgcg gcacagaaaa        60
     ccaacggacc acacttgcac gtctgacatg gacgttacaa tgtgtgggga agttgcggct       120
     ctcgcaacaa taatcctgct tccgtgtcat aaaataactt gcaatacttg catgagcaaa       180
     gtaaagggaa gagttattga cgaagtcggt gaggaattga attgtgaact tgaacgcttg       240
     cgtgaaactc tttcgtcata tggaggatca ttcgggcatg tctcaacatt gcttgatcaa       300
     ctgaacaaag ttttgaatgc gcggaacatg aatgatgaag cttttaaaga aattgctaag       360
     aaaattgatg caaagaaaga gagtccttgg actcacatga cagctattaa caacacgctc       420
     atcaaaggtt cgctagcaac tggctatgaa tttgaaagag cgtctgataa tcttcgagag       480
     attgtgagat ggcatctcaa aaggacagag tcaataaaag ctggcagtgt tgaaagtttc       540
     agaaataagc gttctggaaa ggcccacttc aacccagctc ttacatgtga taatcaattg       600
     gataggaatg gcaatttctt atggggtgag aggcaatacc acgccaaaag attctttgcc       660
     aactattttg aaaagattga tcacagtaag ggttatgagt actacagtca gcgccaaaat       720
     ccaaatggtg tcaggaaaat agccattggc aatttgatat tttcaacaaa tttggaaagg       780
     tttcggcagc aaatggttga acatcacatt gatcaaggac caatcactcg cgaatgcatt       840
     gcactacgca ataacaatta tgttcatgta tgtagctgcg tgactttaga tgatggaacc       900
     ccagcaataa gtgagttgaa gactcctacc aagaaccaca tagttcttgg taactctggt       960
     gatcctaagt acgttgactt gccgactctt gagtctgatt caatgtacat agccaagaaa      1020
     ggttactgct acatgaacat ctttttagcg atgctcataa acatacctga gaatgaggca      1080
     aaggacttta caaagagggt tcgtgacctt gtgggttcaa aacttggaga atggccaacg      1140
     atgttagatg tcgcaacatg cgcaaaccag ttgataattt ttcatcctga tgcagccaat      1200
     gcagaattgc cgcgaatttt agtggatcac cgacagaaaa caatgcatgt cattgactct      1260
     tttgggtctg tggattctgg atatcatata ttaaaggcaa acacagttaa tcagctgatc      1320
     caatttgcta gggaaccact tgatagtgaa atgaagcact acattgtcgg c               1371
//