ID   JQ394690; SV 1; linear; genomic RNA; STD; VRL; 852 BP.
XX
AC   JQ394690;
XX
DT   25-APR-2012 (Rel. 112, Created)
DT   25-APR-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate PRSV-CP-BD-R5 coat protein gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-852
RA   Akhter M.S., Jain R.K., Prachi S., Basavaraj Y.B., Phaneendra C.;
RT   "Studies on genetic diversity of PRSV-P populations from Bangladesh based
RT   on coat protein";
RL   Unpublished.
XX
RN   [2]
RP   1-852
RA   Akhter M.S., Jain R.K., Prachi S., Basavaraj Y.B., Phaneendra C.;
RT   ;
RL   Submitted (10-JAN-2012) to the INSDC.
RL   Division of Plant Pathology, Advanced Centre for Plant Virology, Indian
RL   Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012,
RL   India
XX
DR   MD5; 7e8ab19843c8afaf710b93aab80f14dd.
DR   EuropePMC; PMC3650182; 24426261.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..852
FT                   /organism="Papaya ringspot virus"
FT                   /host="Carica papaya"
FT                   /isolate="PRSV-CP-BD-R5"
FT                   /mol_type="genomic RNA"
FT                   /country="Bangladesh:Rajshahi, Bangladesh"
FT                   /isolation_source="leaf"
FT                   /collection_date="15-Dec-2010"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..>852
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:I1V1U4"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:I1V1U4"
FT                   /protein_id="AFI25154.1"
FT                   /translation="SKAEAVDAGLNDKLKEKEQKEKEKKKEKEKDEAGGGNDVSTSTKT
FT                   GERDRDVNAGTSGTFTVPRIKSFTDKMVLPRIKGRTILNLNHLLQYNPQQIDISNTRAT
FT                   QSQFERWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGDTQVDYPI
FT                   KPLIEHATPSFRQIMAHFSNAAEAYIAKRNATEKYMPRYGIKRNLTDTSLARYAFDFYE
FT                   VNSKTPDRAREAHMQMKAAALRNSSRRMFGMDGSVSSKEENTERHTVEDVTRDMHSLLG
FT                   MRN"
XX
SQ   Sequence 852 BP; 295 A; 152 C; 208 G; 197 T; 0 other;
     tcaaaggctg aggctgttga tgcaggttta aatgataagc tcaaagagaa ggaacagaaa        60
     gagaaagaga aaaagaaaga aaaagaaaaa gatgaagctg gtggcggaaa tgatgtgtca       120
     accagcacga aaactggaga gagagataga gatgttaacg ctggaaccag tggaactttt       180
     acagttccaa gaataaagtc atttactgac aagatggttc taccaagaat taagggaaga       240
     actatcctta atttgaatca tcttcttcag tataatccac agcaaattga catttcaaac       300
     actcgtgcca cccagtctca gttcgagaga tggtacgaag gggtgaggaa tgattatggt       360
     cttaacgata atgaaatgca agtaatgtta aacggcttaa tggtatggtg tattgaaaat       420
     ggtacatctc cggacatatc tggtgtttgg gtaatgatgg atggtgacac tcaagtcgac       480
     tatccaatta agcctttaat tgaacatgca actccttcat ttaggcaaat catggctcac       540
     ttcagcaacg cggcagaagc atacattgca aagagaaacg caactgagaa gtacatgccg       600
     cggtatggaa tcaagaggaa tttgactgac actagtctcg ctagatatgc tttcgatttc       660
     tatgaggtga attcgaaaac acctgataga gcccgtgaag ctcacatgca gatgaaagct       720
     gcagcactac gcaactctag tcgtagaatg tttggcatgg atggcagtgt cagtagcaag       780
     gaagaaaaca cggagagaca cacagtggaa gatgtcacca gagacatgca ctctctcctg       840
     ggtatgcgca ac                                                           852
//