ID   JQ388886; SV 1; linear; mRNA; STD; VRL; 864 BP.
XX
AC   JQ388886;
XX
DT   16-MAR-2012 (Rel. 112, Created)
DT   16-MAR-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Turnip mosaic virus isolate TuMV-HZ coat protein mRNA, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-864
RA   Pan X.P., Shi M.L.;
RT   "The Sequence Analysis of CP Gene of TuMV-HZ Isolate";
RL   Unpublished.
XX
RN   [2]
RP   1-864
RA   Pan X.P., Shi M.L.;
RT   ;
RL   Submitted (08-JAN-2012) to the INSDC.
RL   College of Life and Environmental Sciences, Hangzhou Normal University, 16
RL   Xuelin Str., Xiasha High Education Zone, Hangzhou, Zhejiang 310036, P.R.
RL   China
XX
DR   MD5; 2bcbb0d12d4fba403f81b667b8299d08.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..864
FT                   /organism="Turnip mosaic virus"
FT                   /host="Brassica juncea var.tumida"
FT                   /isolate="TuMV-HZ"
FT                   /mol_type="mRNA"
FT                   /country="China"
FT                   /collection_date="05-Apr-2011"
FT                   /PCR_primers="fwd_name: cp-bamhi, fwd_seq:
FT                   cgggatccgcaggtgaaacgct, rev_name: cp-xhoi, rev_seq:
FT                   gcgagctcttataaccccttaacgc"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>864
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H9CTU9"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:H9CTU9"
FT                   /protein_id="AFD50186.1"
FT                   /translation="AGETLDAGLTDEQKQAEKEKKEREKAEKERERQKQLALKKGKNVA
FT                   QEEGERDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEQRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVKGL"
XX
SQ   Sequence 864 BP; 287 A; 181 C; 232 G; 164 T; 0 other;
     gcaggtgaaa cgcttgatgc aggtttgaca gacgagcaaa agcaggcgga gaaggagaag        60
     aaggagagag agaaggcaga aaaggaacga gagagacaga aacagttggc actcaagaaa       120
     ggcaagaatg ttgcacaaga agagggagaa cgcgacaagg aagtgaacgc tggaacctct       180
     ggaactttca gtgtacccag acttaagagt ctgacaagca agatgcgcgt gccaagatat       240
     gagcaaagag tggcactaaa cctcgatcat ctaatcctat acacgccaga gcagacggat       300
     ctatctaaca cacgttcaac gcgaaagcag ttcgacacat ggtttgaagg tgtaatggct       360
     gattacgaac tgacggagga caaaatgcaa atcattctca atggtttaat ggtctggtgc       420
     attgagaacg gaacctcccc gaacataaac ggaatgtggg tgatgatgga cggcgatgat       480
     caggtggaat tcccgatcaa accgctcatt gaccacgcca aacccacatt taggcagata       540
     atggcccatt tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgacca       600
     tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc tcgctacgcg       660
     tttgacttct atgaaatgac ttctaggact ccaatacgtg cgagagaagc acacatccag       720
     atgaaagcag cagcactgcg tggcgcaaat aacaatttgt tcggcttgga tggaaacgtt       780
     ggtacaacgg tagagaacac ggagaggcat acgaccgagg acgttaatcg gaacatgcat       840
     aacttacttg gcgttaaggg gtta                                              864
//