ID JQ361911; SV 1; circular; genomic DNA; STD; VRL; 2783 BP. XX AC JQ361911; XX DT 23-APR-2012 (Rel. 112, Created) DT 17-OCT-2012 (Rel. 114, Last updated, Version 3) XX DE Wheat dwarf India virus isolate Wellington, complete genome. XX KW . XX OS Wheat dwarf India virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2783 RX DOI; 10.1007/s00705-012-1359-y. RX PUBMED; 22752839. RA Kumar J., Singh S.P., Kumar J., Tuli R.; RT "A novel mastrevirus infecting wheat in India"; RL Arch. Virol. 157(10):2031-2034(2012). XX RN [2] RP 1-2783 RA Kumar J., Kumar J., Tuli R.; RT ; RL Submitted (06-JAN-2012) to the INSDC. RL Agri-Biotechnolgy, National Agri-Food Biotechnology Institute, C-127, RL Phase-8, Mohali, Punjab 160071, India XX DR MD5; d2ff38d99e83aaa2c7202e755934009c. DR EuropePMC; PMC4054350; 24719407. XX FH Key Location/Qualifiers FH FT source 1..2783 FT /organism="Wheat dwarf India virus" FT /host="wheat" FT /isolate="Wellington" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="Oct-2011" FT /identified_by="Jitendra Kumar" FT /clone="IN:Wel:W3SK2" FT /db_xref="taxon:1174526" FT gene 175..495 FT /gene="V1" FT CDS 175..495 FT /codon_start=1 FT /gene="V1" FT /product="movement protein" FT /db_xref="GOA:I0E0B3" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:I0E0B3" FT /protein_id="AFH96031.1" FT /translation="MGSARLGEFSPLAYPGSIAYIPQSPPAVQNEDPWIRLVFVFVAVI FT AAIGLLYLSYRWFVRDVIILLRAKRQRSTEEIGFGNTPARPDGGQPSTRRGPDPSAAAP FT PY" FT gene 540..1283 FT /gene="V2" FT CDS 540..1283 FT /codon_start=1 FT /gene="V2" FT /product="coat protein" FT /db_xref="GOA:I0E0B0" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:I0E0B0" FT /protein_id="AFH96032.1" FT /translation="MSQVKKRTRRGDEVEWSKRKRLRSSGSKGSATKLRKLPVRPSLQI FT QSLYYTLTTYVDFKTGGESYLMASYARGSDEGERHTNETMTYKAALNLHLSASSDACKY FT SNTGTGCIWLIYDAQPTGNKPSPKDIFGYSDSLNSWPTTWMVSREQCHRFVVKRRWTFT FT LETNGRLASDVPPSNVVWPPCKKSINFHKFAKGLGVRTEWKNKTDGGIGSIKKGALYFV FT IAPGNGVEGRMFGTIRMYFKSIGNQ" FT gene complement(1435..2597) FT /gene="Rep" FT CDS complement(join(1435..1810,1900..2597)) FT /codon_start=1 FT /gene="Rep" FT /product="replicase" FT /note="replication associated protein" FT /db_xref="GOA:I0E0B5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:I0E0B5" FT /protein_id="AFH96033.1" FT /translation="MSQTSAENNSANPKASSSTFRYRSNNCFLTFPHCNSCPYGMVQHF FT WDLISTWSPIYAVASVELHQDGTPHLHALLQTRKQISTNDPHFFDFDGHHPHIQAAKNP FT TLCRDYILKGPITFSEKGAFIPRGRNAGTSPRHSNKRSRDDIMKDIIENSTNKSDYLSK FT VRRNFPYDWATKLYNFEYSASKLFPEQQPEYSNPHGQSVPDLYCYETIQDWIDSNLFQV FT HPYCYMLNTPTYIVGPTRTGKSTWARSLGRHNYWQNNVDFTVYDPEAAYNIIDDIPFKF FT CPCWKQLVAAQRDFTVNPKYGKKKLIKGGIPSIILVNSDEDWLKTMTPEQQEYFEANSI FT IYMMEPTEKFFGGAEIV" FT gene complement(1728..2597) FT /gene="RepA" FT CDS complement(1728..2597) FT /codon_start=1 FT /gene="RepA" FT /product="RepA" FT /db_xref="GOA:I0E0B6" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I0E0B6" FT /protein_id="AFH96034.1" FT /translation="MSQTSAENNSANPKASSSTFRYRSNNCFLTFPHCNSCPYGMVQHF FT WDLISTWSPIYAVASVELHQDGTPHLHALLQTRKQISTNDPHFFDFDGHHPHIQAAKNP FT TLCRDYILKGPITFSEKGAFIPRGRNAGTSPRHSNKRSRDDIMKDIIENSTNKSDYLSK FT VRRNFPYDWATKLYNFEYSASKLFPEQQPEYSNPHGQSVPDLYCYETIQDWIDSNLFQV FT HPYCYMLNTPTINSVAEAVQELTWLQENSRIHLQEQGQRASTSSVQQGPENLHGQGPWA FT DTTTGRIM" XX SQ Sequence 2783 BP; 656 A; 626 C; 760 G; 741 T; 0 other; acccgcgtcg cccgtagcat cgcgacgtgg aacgtgggcc tctacgtgac acggagccgc 60 attaattaaa gtaaagatgc ccggtcgctg tcagctttaa ttggtagatg gtgcgtcatt 120 ttcccggccc gcgctgcctt tcctttataa agaggtgact cggaggtgac ttcgatgggg 180 tctgctcgtc taggtgagtt ctctccgctt gcttaccctg gaagcatcgc atatatcccc 240 caatctcctc ccgcagttca gaacgaggac ccgtggatcc gcctggtctt cgtttttgta 300 gcggtaattg ctgcaatcgg tttgctttat ctgagttacc gctggttcgt cagggatgtc 360 atcatactcc ttcgggcgaa gagacagcgg agcacggaag agattggttt cggcaatact 420 ccagctcggc ccgacggtgg acagcctagc accagacgag gacctgatcc ctcggctgct 480 gcacctcctt actgaggcca ggcttcttgt tcaggagctt gccgacggat ccctaaccga 540 tgtctcaggt gaagaagagg acccgtcggg gggacgaagt ggagtggtca aagcgcaagc 600 ggttgaggtc gtccgggtcg aaaggatcgg cgaccaagct taggaagctc ccggtgaggc 660 ccagtctgca gattcagtcg ctgtactata cgctcaccac ctatgtagac ttcaagacag 720 gtggtgaaag ttatctgatg gcctcttacg cccgtggttc cgacgaaggt gagaggcata 780 ctaacgagac tatgacgtat aaggcagccc tgaacctaca tctgtctgcc tcctcggatg 840 cttgtaaata ttctaataca ggcacaggct gcatctggtt gatttacgat gcacagccca 900 cgggaaataa accgtctccg aaggacatct tcgggtactc ggacagcctc aactcctggc 960 caacaacatg gatggtttct cgggagcagt gccatcgttt cgtcgttaag aggcgatgga 1020 cgttcaccct ggagactaac gggaggctcg catctgatgt tcctccttcg aacgtcgtct 1080 ggcctccgtg caagaagagc attaacttcc acaagttcgc caagggtctg ggtgtgcgta 1140 ctgagtggaa gaataaaaca gacgggggga ttggctcgat caaaaaaggt gccttgtact 1200 ttgtaatagc tccgggtaac ggagtagagg gacggatgtt tggtacgatc cgtatgtact 1260 tcaagagtat cggtaaccag taaaggttgc tcatatatgt aataaaccat attttattaa 1320 taaaatggcc atgcttacaa gaaaaaacac acatacaata cagggtggac aggacaaagg 1380 cgggcggata agggtggccg caaggggcaa aacattaaaa aaaaacacac tctgttaaac 1440 aatttcggcc ccgccgaaga acttctccgt tggttccatc atgtaaatga tggaattggc 1500 ttcgaagtac tcctgttgtt ccggggtcat tgtcttcagc caatcctcat cgctgttaac 1560 gaggatgatt gaggggatgc ctccttttat taacttcttc ttaccgtact tagggtttac 1620 ggtgaagtcc ctctgggccg ctaccaactg tttccagcaa gggcagaatt taaatggaat 1680 gtcgtcgatt atgttatatg ccgcttctgg atcgtagact gtaaagtcta cattattctg 1740 ccagtagttg tgtcggccca gggaccttgc ccatgtagat tttccggtcc ttgttggacc 1800 gacgatgtag aggctctttg gccttgttcc tgcagatgga tcctggaatt ttcctgcaac 1860 catgtcagtt cttgtacagc ctctgctacg ctgtttatgg ttggtgtgtt tagcatataa 1920 caataagggt gtacctggaa aaggttagaa tctatccagt cttggatagt ttcgtagcag 1980 tagaggtctg gtacagattg gccgtgggga ttgctgtact ctggttgttg ttcagggaag 2040 agcttcgagg cactatactc gaagttgtat agtttagtgg cccagtcata tgggaagttt 2100 cttctgactt tacttaggta gtcagacttg ttggtggagt tctctatgat atctttcatg 2160 atatcatctc tggatcgttt attggaatgc ctaggactgg ttcctgcatt tctccctctg 2220 gggataaatg ctcccttctc gctaaaagta attggaccct taaggatgta atctcggcat 2280 aatgttgggt tctttgcagc ttgtatgtga ggatgatgac catcaaaatc aaagaaatga 2340 ggatcattgg tagaaatttg cttgcgagtc tgtaggagag catggagatg aggtgtacca 2400 tcctggtgta gttcgacaga agcaacagca tagataggac tccaagtaga aatgaggtcc 2460 cagaagtgtt gaaccattcc atatgggcag gaattacagt ggggaaatgt aagaaagcag 2520 ttattactgc ggtacctgaa ggttgaagac gaggctttgg ggttagccga gttgttctca 2580 gcggaagtct gagacatagc gtgtctgatg ctaacactct ctgggactta gccgcgtttc 2640 cgtcggctcg agttttatcg atactctctc gatgcgcgat cttcccagcg ctgcggcggg 2700 gtttttataa tggtttccga tctgacacct gggaccaggg gggcccagga gcgatggcga 2760 agggcgcgcg cggcaataat att 2783 //