ID   JQ361112; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
XX
AC   JQ361112;
XX
DT   25-APR-2012 (Rel. 112, Created)
DT   25-APR-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Lily mottle virus isolate LMoV-YX HC protein gene, partial cds.
XX
KW   .
XX
OS   Lily mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1374
RA   Wang L., Kong B., Chen H.;
RT   "Detection of Lily mottle virus in Lily by RT-PCR";
RL   Unpublished.
XX
RN   [2]
RP   1-1374
RA   Wang L., Kong B., Chen H.;
RT   ;
RL   Submitted (05-JAN-2012) to the INSDC.
RL   Department of Phytopathology, Yunnan Agricultural University, National
RL   Center for Agricultural Biodiversity, Kunming, Yunnan Province 650201,
RL   China
XX
DR   MD5; 8fc9843253ec83d462b6a03fa8a87832.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1374
FT                   /organism="Lily mottle virus"
FT                   /host="native lily"
FT                   /isolate="LMoV-YX"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Yuxi"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:32624"
FT   CDS             <1..>1374
FT                   /codon_start=1
FT                   /product="HC protein"
FT                   /note="HC-Pro"
FT                   /db_xref="GOA:I1V5D9"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:I1V5D9"
FT                   /protein_id="AFI26400.1"
FT                   /translation="SGPGDKFWAGFNSQFLRIKPKEIPHTCTSNFNVFECGQVAALMCQ
FT                   ALYPCGRITCQQCASEYLELTKVELGEKLSDGLYRTSSQIRENHREFAHVAHILNVIAD
FT                   LLSLKNNNMEAFTEVHKLIGERTQSPFTHLNRLNSILIKGSDLSSNELYECSDCIRELA
FT                   RFQKNRTDNIKKLDVSVFRNKASSKSYFNLDLMCDNQLDKNGNFEWGQRGYHAKRFLSN
FT                   YFEVVNTQNAYREHTLRKHPNGTRELAIGKFIVSTNFEVFRKSMEGKRIPQMPVTEACL
FT                   SQRGERFIYQCCCVTNEDGTPLESTFKMPTKNTLVLGNTGDEKFVDMPTDTDEKMYIAR
FT                   EGYCYINIFFAMLINVRESQAKAFTKMVRDRLVPELGTWPTMIDVATACHTLTVFFPDT
FT                   LSAELPRILVDHNTKTMHVIDSYGSVSTGYHQLKANTVSQLVLFASDTLKSEMKHYQVG
FT                   "
XX
SQ   Sequence 1374 BP; 412 A; 330 C; 328 G; 304 T; 0 other;
     tcgggcccag gcgataaatt ctgggcagga ttcaactctc aattcctcag gatcaaaccc        60
     aaggaaatac cacacacttg cacatcaaac ttcaacgtct tcgagtgtgg gcaggtcgcg       120
     gctcttatgt gtcaagctct gtatccatgt gggagaatta catgtcaaca gtgtgcgtcc       180
     gagtatctgg agctgacgaa ggttgaactc ggggaaaagc tcagcgatgg tttgtataga       240
     acaagttcgc aaattcgtga aaaccaccga gagttcgccc atgtggcaca catactcaac       300
     gtaatagctg atcttctgag cctcaagaac aacaacatgg aggcgttcac agaagttcac       360
     aaactcatag gtgagcgaac acagtcacca ttcacacacc tcaatcgctt gaactcaata       420
     ctgatcaaag gcagcgattt gagcagcaat gagctgtacg aatgttcaga ttgcattcgt       480
     gagctagcgc gattccagaa gaacaggaca gataacatca agaaactgga cgttagcgtg       540
     tttcggaata aagcatcctc caagtcatac ttcaacctgg acttgatgtg tgacaaccaa       600
     cttgacaaga acggaaactt cgaatggggc cagcgaggct atcatgccaa acggttctta       660
     tcgaattatt ttgaggttgt caacacacag aatgcctacc gagagcacac attgaggaag       720
     catccgaatg gcacgcgaga gctcgcaatt gggaaattta tagtgtcaac aaacttcgaa       780
     gtgtttcgca agagcatgga agggaagcgc ataccacaaa tgcctgttac tgaggcttgc       840
     ctgagtcagc gtggtgagcg tttcatttac cagtgctgct gtgtaacaaa cgaagatggc       900
     actccactcg agtcgacatt caaaatgcca acgaagaaca cactcgtgct tgggaacacg       960
     ggtgatgaga aatttgtcga catgcccacc gacacggatg agaagatgta tatagctcga      1020
     gagggctact gctacatcaa catatttttc gccatgctaa taaacgttcg tgaaagtcaa      1080
     gcaaaggcat tcacgaagat ggtgcgagac cgcctcgtac ccgagcttgg aacatggcca      1140
     accatgatcg atgtggcaac agcatgccac acattgactg tctttttccc agacacactg      1200
     agcgcagaac tcccgcgaat tctcgtggac cacaacacta agacgatgca tgtgattgac      1260
     tcatacggat ctgttagcac tggctaccac cagttaaagg ctaacacagt gagtcagcta      1320
     gtcctctttg ctagtgacac gctgaagtca gaaatgaagc actaccaggt cggc            1374
//