ID   JQ361104; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
XX
AC   JQ361104;
XX
DT   25-APR-2012 (Rel. 112, Created)
DT   25-APR-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Lily mottle virus isolate LMoV-AH HC protein gene, partial cds.
XX
KW   .
XX
OS   Lily mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1374
RA   Wang L., Kong B., Chen H.;
RT   "Detection of Lily mottle virus in Lily by RT-PCR";
RL   Unpublished.
XX
RN   [2]
RP   1-1374
RA   Wang L., Kong B., Chen H.;
RT   ;
RL   Submitted (05-JAN-2012) to the INSDC.
RL   Department of Phytopathology, Yunnan Agricultural University, National
RL   Center for Agricultural Biodiversity, Kunming, Yunnan Province 650201,
RL   China
XX
DR   MD5; 2e20c6f22d388b97744aa7f8f32d316c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1374
FT                   /organism="Lily mottle virus"
FT                   /host="Lilium longiflorum Thumb. (lily)"
FT                   /isolate="LMoV-AH"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Anhui"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:32624"
FT   CDS             <1..>1374
FT                   /codon_start=1
FT                   /product="HC protein"
FT                   /note="HC-Pro"
FT                   /db_xref="GOA:I1V5D1"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:I1V5D1"
FT                   /protein_id="AFI26392.1"
FT                   /translation="SRPGDKFWAGFNSQFLRIKPKEIPHTCTSNFNVFECGQVAALMCQ
FT                   ALYPCGRITCQQCASEYLELTKVELGEKLSDGLYRTSSQIRENHQEFAHVAHILTVIAD
FT                   LLSLRNNNMEAFTEVHKLIGEQTQSPFTHLNRLNSILIKGSDMSSNELYECSDCIRELA
FT                   RFQKNRTDNIKKLDVSVFRNKASSKSYFNLDLMCDNQLDKNGNFEWGQRGYHAKRFLSN
FT                   YFEVVNTQNAYREHTLRKHPNGTRELAIGKFIVSTNFEVFRKSMEGRRIPLMPVTEACL
FT                   SQRGERFIYQCCCVTNEDGTPLESTFKMPTKNTLVLGNTGDEKFVDMPTDTDEKMYIAR
FT                   EGYCYINIFFAMLINVRESQAKAFTKMVRDRLVPELGTWPTMIDVATACHTLTVFFPDT
FT                   LSAELPRILVDHNTKTMHVIDSYGSVSTGYHQLKANTVSQLVLFASDTLKSEMKHYQVG
FT                   "
XX
SQ   Sequence 1374 BP; 416 A; 329 C; 322 G; 307 T; 0 other;
     tcgcgcccag gcgataaatt ctgggcagga ttcaactctc aattcctcag gatcaaaccc        60
     aaggaaatac cacacacttg cacatcaaac ttcaacgtct tcgagtgtgg acaggtcgcg       120
     gctcttatgt gccaagcact gtacccatgt gggagaatta catgtcaaca atgtgcgtcc       180
     gaatatctgg agctgacgaa ggtcgaactc ggggaaaagc tcagcgacgg tttgtataga       240
     acaagttcgc aaattcgtga aaaccaccaa gagttcgccc atgtggcaca catactcact       300
     gtgatagctg atcttctgag cctcaggaac aacaacatgg aggcgttcac agaagtccac       360
     aaactcatag gtgagcaaac acagtcacca ttcacacacc tcaaccgctt gaattcaata       420
     ttgatcaaag gcagcgatat gagcagcaat gagctgtatg aatgttcaga ctgtattcgt       480
     gagcttgcgc gattccagaa gaacagaaca gataacatca agaaactgga cgttagtgta       540
     tttcggaata aagcatcctc caagtcatac tttaacctgg acttgatgtg tgacaaccaa       600
     cttgacaaga atggaaattt cgaatggggc cagcgaggct atcatgccaa acggttctta       660
     tcgaattatt ttgaggttgt caacacacag aatgcctacc gagagcacac actgaggaag       720
     catccgaatg gcacgcgaga gctcgcaatt gggaaattta tagtgtcaac aaactttgaa       780
     gtgtttcgca agagcatgga agggaggcgc ataccactaa tgcctgttac tgaggcttgc       840
     ctgagtcagc gtggagagcg tttcatttac cagtgctgct gtgtaacaaa cgaagatggc       900
     actccactcg agtcgacatt caaaatgccc acgaagaaca cactcgtgct tggaaacacg       960
     ggtgatgaga aatttgtcga catgcccacc gacacggatg agaagatgta tatagctcga      1020
     gagggctact gctacatcaa catatttttc gccatgctaa taaacgttcg tgaaagtcaa      1080
     gcaaaggcat ttacgaagat ggtgcgagac cgcctcgtac ccgagcttgg aacatggcca      1140
     accatgatcg atgtggcaac agcatgccac acattgactg tcttcttccc agacacactg      1200
     agcgcagaac tcccgcgaat tctcgtggac cacaacacta agacgatgca tgtgattgac      1260
     tcatacggat ctgttagcac tggctaccac cagttaaagg ctaacacagt gagtcagcta      1320
     gttctctttg ctagtgacac gctgaagtca gaaatgaagc actatcaggt cggc            1374
//