ID JQ326264; SV 1; circular; genomic DNA; STD; VRL; 2742 BP. XX AC JQ326264; XX DT 10-OCT-2012 (Rel. 114, Created) DT 10-OCT-2012 (Rel. 114, Last updated, Version 1) XX DE Bhendi yellow vein mosaic virus isolate OY79B segment DNA-A, complete DE sequence. XX KW . XX OS Bhendi yellow vein mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2742 RA Venkataravanappa V., Lakshiminarayanareddy C., Jalali S., Krishnareddy M.; RT "Molecular genetic diversity of Begomoviruses infecting okra in India"; RL Unpublished. XX RN [2] RP 1-2742 RA Venkataravanappa V., Lakshiminarayanareddy C., Jalali S., Krishnareddy M.; RT ; RL Submitted (28-DEC-2011) to the INSDC. RL Division of Plant Pathology, Indian Institute of Horticultural Research, RL Hessaraghatta Lake Po, Bangalore, Karnataka 560089, India XX DR MD5; dc0ce29be2551e2297bb3f523987f288. XX FH Key Location/Qualifiers FH FT source 1..2742 FT /organism="Bhendi yellow vein mosaic virus" FT /segment="DNA-A" FT /lab_host="okra" FT /isolate="OY79B" FT /mol_type="genomic DNA" FT /country="India:Karnal, Haryana" FT /isolation_source="leaf" FT /collected_by="M. Krishnareddy" FT /collection_date="2006" FT /db_xref="taxon:120168" FT gene 121..486 FT /gene="AV2" FT CDS 121..486 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:C3TUJ5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:C3TUJ5" FT /protein_id="AFU61930.1" FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL FT ICILRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ FT ETQNVPDVQKSGCSKGM" FT gene 281..1051 FT /gene="AV1" FT CDS 281..1051 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:K4I253" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:K4I253" FT /protein_id="AFU61931.1" FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGQYAIKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(629..985) FT /gene="AC5" FT CDS complement(629..985) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="GOA:K4HXW4" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:K4HXW4" FT /protein_id="AFU61932.1" FT /translation="MSTSHIKHQRILGMILVFSCLLLVVNNVIVNPNKFLNQRLFLNRI FT LSTSNGCMPFPQHLVPIPMHVLHGRRTGLVIKHIKYLTKILWFIYRSSITNKEKHHRIR FT MVLGLDVLVHPYLT" FT gene complement(1054..1458) FT /gene="AC3" FT CDS complement(1054..1458) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:K4HZE2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:K4HZE2" FT /protein_id="AFU61933.1" FT /translation="MDSRTGERITAAHSKNGVYIWKVPNPLYFKILNHDNRPFTTNMDI FT ITMRIHFNYNLRKALGIHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLNNLGVISINL FT VIKAVEHVLYNVINQTMYVDQYSDIKFNLY" FT gene complement(1151..1603) FT /gene="AC2" FT CDS complement(1151..1603) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:K4HYD9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:K4HYD9" FT /protein_id="AFU61934.1" FT /translation="MQHSSSSPNRCTRVPIKVQHMEAKRRIRRRRVDLECGCSYYLSIN FT CHNHGFSHRGTHHCSSFKEWRLYLEGSKSPLFQNPQPRQPSIHDEHGHHNNEDPFQLQP FT SESSGNTQVFSNLPNLDDLTPSDWSFLKGIQNPSPQISQQSRGNLD" FT gene complement(1500..2591) FT /gene="AC1" FT CDS complement(1500..2591) FT /codon_start=1 FT /gene="AC1" FT /product="replicase" FT /db_xref="GOA:K4IAQ1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:K4IAQ1" FT /protein_id="AFU61935.1" FT /translation="MPPSKRFQIYSTKYFLTYPKSSLSKEEALSHIQNTHTPPNKKFIK FT ICRELHEDGEPHLHALIQFEGKYKCQNQRYFDLVSPSRSVHFHPNIQGAKSGSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIRELAPKDYVLQFH FT NLNANLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVMDAAARPLRPLSLVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNIIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEEKNSALKAWALKNAAFVFLTEPL FT YSGTNQSSAHGSEETHQEEESGS" FT gene complement(2132..2434) FT /gene="AC4" FT CDS complement(2132..2434) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:K4I259" FT /protein_id="AFU61936.1" FT /translation="MGNLICTRSSSSRANTSARISDTSTWSPQAGQYISIRTFRELNQA FT QMSSPTSTRTETPSNGESFRSMDDLQEGDSRQPTTLTPQHLTQAVSQRLLESLGS" XX SQ Sequence 2742 BP; 725 A; 553 C; 653 G; 811 T; 0 other; accggatggc cgcgcgattt ttttaagtgg tgggtccaga acgcacgact atgcagactc 60 aaagcttaga taacgctcct tcggctataa gtacgtgcgc actaagtttc aattcaaaaa 120 atgtgggatc cactattaaa tgaatttccg gatacggttc acgggtttcg ttgtatgcta 180 tctgtaaaat atttgcaact tttgtcgcag gattattctc cagatacgct tgggtacgag 240 ttaatacggg atttaatttg tattttacgc tcccgtaatt atgtcgaagc gagctgccga 300 tatcgtcatt tctacgcccg cgtcgaaagt acgccggcgt ctgaacttcg gcagcccata 360 caccagccgt gctgctgccc ccattgtccg cgtcacaaaa caacaggcat ggacaaacag 420 gcctatgaac aggaaaccca gaatgtaccg gatgtacaga agtccggatg ttccaagggg 480 atgtgagggt ccctgtaagg tacagtcgtt tgaatctcga cacgatgtcg ttcatattgg 540 taaggtaatg tgtatttcgg atgttacgcg tggagtcggt ttgacccatc gtataggtaa 600 gcgtttttgt gtcaagtcag tttatgtttt aggtaagata tggatggacg agaacatcaa 660 gaccaagaac catacgaatt cggtgatgtt tttccttgtt cgtgatcgac gaccggtaga 720 taaaccacag gattttggtg aggtatttaa tatgtttgat aacgagccca gtacggcgac 780 cgtgaagaac atgcataggg atcggtacca ggtgttgagg aaatggcatg caaccgttac 840 tggtggacaa tatgcgatta aggaacaggc gttggttaag aaatttgtta gggttaacaa 900 ttacgttgtt tacaaccagc aggaggcagg aaaatacgag aatcataccg agaatgcgtt 960 gatgctttat atggcttgta ctcatgctag caatccagtt tatgctacgc tgaagattag 1020 gatatatttt tatgactctg taacgaattg aaattaataa agattgaatt ttatatctga 1080 atattggtct acatacattg tttgattaat tacattgtac aatacatgtt caacagcttt 1140 aataactaaa ttaatcgaga ttacccctag attgttgaga tatttgagga cttgggtttt 1200 gaataccctt aagaaaagac cagtcggagg gtgtaaggtc gtccagattc ggaaggttag 1260 aaaacacttg tgtattccca gagctttccg aaggttgtag ttgaaatgga tcctcattgt 1320 tatgatgtcc atgttcgtcg tgaatggacg gttgtcgtgg ttgaggattt tgaaatagag 1380 gggatttgga accttccaga tatagacgcc attctttgaa tgagctgcag tgatgcgttc 1440 ccctgtgcga gaatccatgg ttgtggcagt tgatagatag ataataagag catccgcatt 1500 caagatccac tctcctcctc ctgatgcgtc tcttcgcttc catgtgctga actttgattg 1560 gtacccgagt acaacggttc ggtgaggaag acgaatgctg cattttttaa agcccacgct 1620 tttaaagctg agttcttttc ctcgtccaag aactctttat agcttgcgtt ggggcctgga 1680 ttgcagagga agattgttgg tatgccccct ttaatttgaa ctggcttccc gtacttggtg 1740 tttgattgcc agtccctttg ggcccccatg aattctttaa agtgtttcag ataatgcggg 1800 tcaacatcat ctataatgtt gaaccacgca tcgtttgaat acactttagg gctcagatct 1860 aggtgaccgc acaaatagtt atgtgggcct aatgacctag cccacatagt tttgcccgta 1920 cgactatctc cctctaagac taaactcaaa ggtctcagag gccgcgcagc ggcgtccatg 1980 acgttttccg atacccattc ctcaagttct tctggaactt gatcgaaaga agaagataaa 2040 aaaggagaaa cgtaaacctc caagggaggt gtaaaaatcc tatctaaatt ggcatttaaa 2100 ttatgaaatt gtaagacata atccttaggt gctaactccc taatgactct aagagcctct 2160 gacttactgc ctgcgttaag tgctgcggcg taagcgtcgt tggctgtctg ctgtccccct 2220 cttgcagatc gtccatcgat ctgaaactct ccccattcga gggtgtctcc gtccttgtcg 2280 atgtaggact tgacatctga gcctgattta gctccctgaa tgttcggatg gaaatgtact 2340 gacctgcttg gggagaccag gtcgaagtat cgctgattct ggcacttgta tttgccctcg 2400 aactggatga gcgcgtgcag atgaggttcc ccatcctcgt gaagctctct gcagatcttg 2460 atgaattttt tatttggtgg agtgtgtgtg ttttgtatgt gggaaagcgc ctcctcttta 2520 gaaagagagc tttttggata agtgaggaaa tattttgtgg aatatatttg aaaacgttta 2580 gaaggtggca tgactaaaag tgagcacccg agtgactcgc tctggcaact ctctctggta 2640 tatcggtacc caatacatag tgagtaccaa atgtcatatt tgtaattctg caatgaaatt 2700 caaaatcctc acgctccaaa aagcggccat ccgtataata tt 2742 //