ID   JQ322970; SV 1; circular; genomic DNA; STD; VRL; 1390 BP.
XX
AC   JQ322970;
XX
DT   04-APR-2012 (Rel. 112, Created)
DT   04-APR-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Papaya leaf curl alphasatellite isolate CLCuV, complete sequence.
XX
KW   .
XX
OS   Papaya leaf curl alphasatellite
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
XX
RN   [1]
RP   1-1390
RA   Sinha V., Kumar A., Khan Z.A., Bhatnagar D., Khan J.A.;
RT   "Alpha satellite DNA associated with Papaya Leaf Curl Disease";
RL   Unpublished.
XX
RN   [2]
RP   1-1390
RA   Sinha V., Kumar A., Khan Z.A., Bhatnagar D., Khan J.A.;
RT   ;
RL   Submitted (27-DEC-2011) to the INSDC.
RL   School of Biochemistry, Devi Ahilya University, Khandwa Road, Indore, M.P.
RL   452017, India
XX
DR   MD5; 1a960cd145d70f0eec50554b1b9279ac.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1390
FT                   /organism="Papaya leaf curl alphasatellite"
FT                   /host="papaya"
FT                   /isolate="CLCuV"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /isolation_source="leaf"
FT                   /collection_date="Feb-2010"
FT                   /proviral
FT                   /db_xref="taxon:1112202"
FT   gene            89..1036
FT                   /gene="Rep"
FT   CDS             89..1036
FT                   /codon_start=1
FT                   /gene="Rep"
FT                   /product="replicase"
FT                   /db_xref="GOA:H9U1Q0"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:H9U1Q0"
FT                   /protein_id="AFG29502.1"
FT                   /translation="MPAVQSFWWCFTIFFTSAAPPDLVSLFENTSVSYACWQEEESPTT
FT                   KRRHLQGYLQLKTKKSLSTVKSLFGDLNPHLEKQRARKTDDARDYCMKEETRVSGPFEF
FT                   GDYCPSGSHKRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKTAHEIQISNLKSW
FT                   QLRLKTLLERAPDDRTIFWVYGPDGGEGKSTFARDLYRSGTWFYTRGGSADNVAYQYIG
FT                   QLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDF
FT                   EKISQDRVHVIPCIPCGVCRKQHHVGEKCDEYVE"
XX
SQ   Sequence 1390 BP; 423 A; 261 C; 312 G; 394 T; 0 other;
     acccagcctt gtctacctct ccttggctac ctctgaaaaa tccccaattt gcccccgcag        60
     gggaaaaatt ctccttccct cgtttaagat gcctgctgtt cagtcattct ggtggtgttt       120
     cactattttc ttcacgagtg ctgccccccc cgacctggtg tctctcttcg agaacaccag       180
     tgtgtcctac gcctgctggc aggaagagga atctcctacg accaagcgtc gccacctgca       240
     gggctatctg cagttgaaga ctaagaagtc tctttctacg gtgaaatcct tgtttgggga       300
     tctcaatccc catcttgaga aacaacgagc tcggaaaact gacgatgctc gtgattattg       360
     catgaaagag gaaactaggg tttccggtcc ctttgaattt ggggattatt gtcctagtgg       420
     ttctcacaaa cgccggcaac gagaatctgt aattcgaagt ccggtgagaa tggcagagga       480
     aaatccatct gttttccgac gagtaaaggc aaagattgca gaggaagaat tccagaagac       540
     cgcgcatgag attcaaattt caaatttgaa atcgtggcaa ctgcgcctca agacgctttt       600
     ggaacgggcc ccagatgatc gcactatctt ctgggtatat gggccagatg gtggggaagg       660
     gaaatcaacc tttgctagag acctgtatag aagtgggacc tggttctata cacgtggagg       720
     atctgcagat aatgtagctt accagtacat aggtcaatta ggaaataata ttgtatttga       780
     tattcctcgt gataagaagg attatcttca atacagttta atagagatgt ttaaggatag       840
     gttaatagtt agcaataagt atgagcctct tatggctccg ttaattaatt gtattcacgt       900
     agttgtaatg tctaattttc tcccagactt tgagaagatt agtcaagata gagttcatgt       960
     aatcccttgt attccttgtg gtgtttgtcg taaacagcac catgttggtg aaaaatgtga      1020
     tgagtatgtt gaataattac ttttgtttct tgaagacaag aaagaatgaa atgaaaaaaa      1080
     aaaataaaaa catgagcctt ctactatatt tacggaataa ctgccgcgca gcggcattaa      1140
     aaaaaataaa gataaaaaag aagtatataa tatatttatt atgtctttct aaaacgacga      1200
     cgtattggaa aagtgaaaat gggactaaaa tgtaaatata taaaacttcg tgcttgcgga      1260
     gcaaaaactt cgaaatataa ggttagcgga gtaaatatat gatagttgaa gggcctcgtt      1320
     gtaattatga gcttggctac caggtatccc aaggatataa ataacacgtc gacaaggctg      1380
     gtgtagtatt                                                             1390
//