ID JQ316469; SV 1; linear; genomic RNA; STD; VRL; 6500 BP. XX AC JQ316469; XX DT 23-DEC-2012 (Rel. 115, Created) DT 23-DEC-2012 (Rel. 115, Last updated, Version 1) XX DE Potato virus T isolate Oruro 26 replicase, movement protein, and coat DE protein genes, complete cds. XX KW . XX OS Potato virus T OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Tepovirus. XX RN [1] RP 1-6500 RA Cuellar W., Silvestre R.; RT "Recombination and variability among isolates of potato virus T"; RL Unpublished. XX RN [2] RP 1-6500 RA Cuellar W., Silvestre R.; RT ; RL Submitted (22-DEC-2011) to the INSDC. RL Crop Management and Production Systems Division, International Potato RL Center, La Molina 1895, Lima 12, Peru XX DR MD5; ea14a93196787d8af80f9bc81c17878c. DR EuropePMC; PMC6256546; 30533781. XX FH Key Location/Qualifiers FH FT source 1..6500 FT /organism="Potato virus T" FT /host="Solanum curtilobum" FT /isolate="Oruro 26" FT /mol_type="genomic RNA" FT /country="Bolivia" FT /db_xref="taxon:36403" FT CDS 31..4854 FT /codon_start=1 FT /product="replicase" FT /note="RNA-dependent RNA polymerase; methyltransferase FT domain; RNA helicase" FT /db_xref="GOA:K9MBP3" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:K9MBP3" FT /protein_id="AFU55321.1" FT /translation="MSFSFRTPAELFVQSLPKEYAEACFKSHAANFQIRSDKGIGLFDF FT ACSSVVKERLTKAGIPVSAFCNQEHSHPASKMIENHFLYNILPNYLNLKNYTAISIKDS FT KVRKLLKNGVDSLETFNRLFSCKDALRYVDPETCDMDKFIARVHHSTRIFLFDELHYWS FT MNSLSDFLDRSNVRELLATIVFPVEILLGSKRSLNPELYEFEISRGKLHFFPDGCTSES FT YSQPKDCGILKVNRIVTKTGKIFSVELIHTIGANHMVMIKEGSFDVDSERFFDRSSALT FT TSLLMPTRAGKALRIRRKFLLRLIIYLFSLKKPDHHSAIAKIRQSSDDSIFCDEIMLAD FT HVGKIFEKLDPASPFGVKGVLDLLTGIFKDIFLLDGLFNWSDRRKSEKFVEFMRALDYQ FT TNKVVTCTFSGGIMRSGFLAEFFLDNDCEASEGLDEVISRFDTFFDPKKEYSAHALRVN FT IKDRVPSPYGPMKARTPSVVLHREYITKIELSSKAKKVNVLKERLTGEVSFEEARLQRM FT WYSDSQFVAGLVPKLRYVKMLTWKEDQKLFSELPSEESNEVEMEDAFECEEKENSEEEG FT SKERDENGANSEECEQLDSEDDVGSFEYEETKADSYEIDFEAILNRVNSGGLRGVCLLD FT ALAKITGTKREITLSILLGRDGTWADWFLKDKGATFDDVFKAVSDLDLNCTICTKEGSF FT NAHVNRNYKHNFLYLFDEHVSLERPKIMLFEQVRHQKINFLGAFEKCPGAGKFRYEALA FT ERGSLLASALKDNLTGVISSKFNWDPKCEFVNIEKEILVVAGFAGSGKTRGICQIVKSM FT FNNKKTLVLSPRKNLADDWVKNLANLHRPSHVKAMTFEAGLRRVQKSSLIVIDELSLMP FT NGYLDMLINMNEEATFITLFDPLQARYHAKSDVLRVSPENDVDRIKVPKYLFFSKRMSS FT ELDFFDIKCSSDQKKWELHGKQYREPAALFRDIKGQEFTILSPSFETAREMSKYADIKD FT GCKSMTFGESQGLTVNKAVIVVDQDLVATSVLHWIVALTRSRQGFVILVHKVFDMKTLI FT QPVQNSIIGLVLRGIKVSREHLINTAGKCLSEAEMVEELETFKRTEEDEDLLEGDLWLK FT GQLFLCQSVELDEVTPEEPLRHESPPRTHLPLPVEGLTPLLMSNVKAREDREFITPSGW FT SKQFRDDKENVDWRNVSYADAFETIYPKHEASDDITLWAAIQKRIVMADPFRNAIKLQK FT VEPISAEIFNEMNKILLLNPHVNVDRDQVYKEFLRKRLNKSKKLIESHSERSSDDWPID FT HFFLFMKSQLCTKFEKRFVDAKAGQTLACFSHKLLTRFGPAFREFEKKFTANLPPSWYI FT HTMKNFDQLNNWVINYVDQEEGTESDYEAFDRSQDAIILGLEIECLKLFGWDQDLIDDY FT RKLKLWMGCRLGAIAIMRFTGEFGTFFFNTIANIAFTCLRYNITRDTVIAFAGDDMYAS FT GKLEIRKDREDLLAHLTLKAKVQFTEKPMFCGWYIKKMGIVKEPRLVLERWLIAERKKV FT IDQCFINYSIEVSYGYRLGEYLWEYFDNLEDFQAIVRLVIKKKKQLPPAIRRIFETSNG FT VDFSGEVQETMGREGEHHGSCGLWCNLH" FT CDS 4763..5839 FT /codon_start=1 FT /product="movement protein" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:K9MBI8" FT /protein_id="AFU55322.1" FT /translation="MELISVEKFRRQWEERESITGPVDSGAIYTNSAFHNLKTKWHVYK FT SECSIGLDLPDNGKIISKDIPLFDQEEIDNIIKDDKQVFVHLGAFVFGLVAHFPVDEEV FT EGLVSIIDKRRTDLRRATLACRKIKFVNGRCAFMMKPNFSVRKEDLRDGVTFCAAIKIK FT NLGFEGGFFPFSACGGVIYRTSNVSFANAVDKTFASRTVHDLVGTDVLSLDQLDQATLE FT DLEEVRRSPILRLTAPDERVMIERGNWFQKKPAIRRRSFGKRRPQKCSSVRSASLPRFS FT CSERLERGFESESLAGLVLDQKYGSNNFCADKRRSPESDSGSLQQSMGQSSHSGSEGWG FT KGTDVAIPLRKNRNIFSE" FT CDS 5673..6314 FT /codon_start=1 FT /product="coat protein" FT /note="viral capsid" FT /db_xref="GOA:K9MBR2" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:K9MBR2" FT /protein_id="AFU55323.1" FT /translation="MDPTTFVQTRDEVLNLTVAAYSSQWDSQATQALKDGAKEQMLRFL FT FGRIAISSASRNTIWPDVEITSEDLQIGMSAASAGPPSVAAAPVSLIFRVNFNSYVKML FT IALSNTSTNPFVKNKTLRQMCMPFAKYAYGYLSEMGYATWAYEKMPKLCRKAKWVAFDF FT ASGLLIDTTMQLNDDEKTVIQGLGARLFKTQQSIQIADSTMDGEAINREI" XX SQ Sequence 6500 BP; 2013 A; 1114 C; 1553 G; 1820 T; 0 other; tcaaaagaca ctaattgtct acaattaaaa atgtctttct ccttcaggac gccagcagaa 60 cttttcgttc agtctttgcc taaagaatat gcagaggcat gttttaaatc tcatgcagct 120 aatttccaga tccgatccga taagggaatt ggcttatttg attttgcatg ttcttctgtg 180 gtcaaggaaa gactcactaa ggccggtata cctgtttctg ccttttgtaa tcaagaacat 240 tctcaccccg catccaagat gattgaaaac catttcctgt acaatatttt acctaattac 300 ctgaacctca aaaattacac cgcaatttca attaaggatt ccaaagttag gaagttgttg 360 aagaatggtg tggatagttt agaaactttc aatagattat ttagctgtaa agatgcttta 420 agatatgtag atcctgaaac ttgtgatatg gataaattca tagctagggt tcatcattca 480 actaggatat ttctattcga tgagctccat tactggtcca tgaactccct atctgacttt 540 ttggataggt ctaatgtcag agagctgttg gccactatag tttttcccgt cgaaattctg 600 cttggatcaa agaggagttt gaatccagaa ctctatgaat ttgagatttc aagaggaaag 660 ttacatttct ttccagatgg ttgcacatca gagtcctatt cacagccaaa agattgtggt 720 atcttgaagg taaacagaat tgtgactaaa accggaaaaa tcttctcagt tgagcttatt 780 cacaccattg gggctaatca catggtaatg ataaaagagg gttcctttga tgttgactca 840 gagagattct ttgatagatc ctcggctttg accaccagtc ttttaatgcc tactagagca 900 ggtaaggccc ttagaatcag aaggaagttt cttttgagat tgataattta cctgttttca 960 ctgaaaaaac ctgatcatca ttctgcaatc gccaagatca gacaaagctc agatgactcc 1020 atcttttgtg atgagataat gttggctgac catgttggca aaatattcga gaaattggat 1080 cctgctagtc cttttggagt caaaggagtc cttgatttgt taacaggtat tttcaaagat 1140 attttcctac tcgatggtct cttcaattgg tctgatagaa ggaaatctga gaagtttgta 1200 gaattcatga gagctttgga ttatcagact aacaaggttg tcacttgtac tttttcaggt 1260 ggaatcatga ggagtggctt cttggcggaa ttcttcttgg acaacgattg cgaagctagt 1320 gaagggctgg atgaagtaat ttcaaggttt gacactttct ttgacccaaa aaaagaatat 1380 tcagcacatg ctttgagggt gaacatcaag gacagggtac caagcccata tggtccaatg 1440 aaggcaagaa ctccaagtgt cgtgctacat agagagtaca taacaaagat tgagctctct 1500 agcaaggcga agaaggtcaa tgtcttaaaa gagaggttga ctggagaggt gtcttttgaa 1560 gaggccaggt tgcagagaat gtggtactcc gattctcaat ttgttgctgg gttggtgccg 1620 aaactgagat atgtcaagat gttgacatgg aaagaagatc agaagctgtt cagtgaactc 1680 ccctcagaag agtcaaatga ggttgagatg gaggatgcat ttgaatgtga ggaaaaggag 1740 aactctgaag aagagggatc aaaagagagg gatgagaatg gagcaaactc tgaagagtgt 1800 gagcagctgg attcagaaga tgatgttggt tcatttgagt atgaggaaac aaaggctgat 1860 tcctatgaga ttgactttga ggcaatttta aatagagtca actcaggagg tcttcgaggt 1920 gtttgcttgt tggatgcctt agcaaaaata actgggacaa aaagagagat caccctctct 1980 attctcctag ggagggatgg cacttgggcc gattggtttc tgaaggataa gggcgctact 2040 tttgatgatg tcttcaaggc agtttcagac cttgatctaa attgtacaat atgcacgaaa 2100 gagggctcat tcaatgcaca tgtgaatagg aattataagc ataacttcct ttatttattc 2160 gatgaacatg ttagcttgga aaggccaaag atcatgctct ttgaacaggt gagacatcaa 2220 aagataaatt ttttgggtgc ctttgaaaaa tgtcccgggg ctggtaagtt ccgctacgaa 2280 gcgttggctg agagagggag tctgctagct tctgctttga aagacaatct cactggagtt 2340 atttcaagca aattcaattg ggaccccaaa tgtgaattcg tgaatattga aaaggaaatt 2400 cttgttgtgg ctggttttgc aggttctgga aagactcgag gcatatgtca aatcgtcaag 2460 agcatgttta acaataagaa aactcttgtt cttagtccaa ggaagaatct ggcggatgat 2520 tgggttaaga acttggccaa tttgcacagg ccaagccatg tgaaggcgat gacatttgaa 2580 gctggtttga ggcgagtaca gaagtcttct ctaattgtga tagatgagtt atctttgatg 2640 ccaaatggtt atctagatat gctcataaat atgaatgagg aggccacatt catcacactc 2700 tttgatccac tgcaggccag gtaccacgca aaaagtgatg tgctcagggt gagccctgaa 2760 aatgacgttg acagaataaa ggtaccgaaa tacctcttct tctcaaagag aatgagttca 2820 gagctagatt tctttgacat taaatgctca tctgatcaaa aaaagtggga gcttcatgga 2880 aagcaatacc gtgagccagc tgcactattc agagacatca aaggtcagga attcacaata 2940 ctgtcaccat catttgagac tgctagagaa atgtccaagt atgcagatat caaggacggg 3000 tgcaaatcaa tgacctttgg tgaatcacaa ggtctaacag ttaacaaggc agtgattgta 3060 gttgaccaag atctggttgc aacatcagtg ttacattgga tagttgcatt gactaggagc 3120 agacagggtt ttgttatact ggtgcacaaa gtctttgaca tgaaaacatt gattcagcct 3180 gttcagaatt ctataattgg tctcgtgcta agagggatta aggtttcaag agaacatctt 3240 atcaacacag ctggaaagtg tctgtccgaa gcagaaatgg tagaggagtt ggagaccttc 3300 aaaaggacag aagaggatga agacctactc gaaggtgatc tttggttaaa gggtcagctc 3360 tttctttgtc aaagtgttga attggacgaa gttacacctg aggaaccatt gaggcatgag 3420 agcccaccta ggacacattt acctctcccg gttgaaggat tgacaccgct tttaatgtca 3480 aatgttaagg caagagagga tagagagttc ataactccaa gtgggtggag caaacaattc 3540 agggatgata aagaaaatgt ggactggaga aatgtctcat atgctgatgc tttcgagaca 3600 atttatccga aacatgaggc aagtgatgac ataaccctat gggccgccat tcaaaagaga 3660 atagtgatgg cagatccatt cagaaatgca ataaagttgc aaaaagtgga accaatttca 3720 gctgagattt tcaatgaaat gaacaaaata cttctcttga atccacatgt gaatgttgat 3780 agggatcaag tctacaaaga gttcttgaga aagaggttaa ataagtcaaa gaagttaata 3840 gaatcccact ctgaaagatc atctgacgat tggccaatag atcacttttt cctgttcatg 3900 aagagccagc tatgtacaaa gtttgagaag aggtttgtgg atgcaaaggc tggtcaaaca 3960 ctagcttgtt tctcacacaa gttattgaca agatttggac ctgccttcag agagtttgaa 4020 aagaagttca cagcaaattt gccgccatca tggtacattc acacaatgaa gaatttcgat 4080 caactgaata attgggtcat taactacgtt gatcaagaag aaggcactga atctgattat 4140 gaagctttcg atagatcaca ggatgcaatc attctaggtc ttgaaattga atgtctgaaa 4200 ttgtttggat gggatcaaga cctgatcgat gactacagaa agctgaagct ttggatggga 4260 tgtagattgg gggcaattgc aattatgaga tttacaggtg aatttggaac attctttttc 4320 aacacaattg caaacatcgc attcacatgt ttgaggtata atatcactag agacactgtg 4380 attgcgtttg caggagatga catgtatgca tccggaaaac tcgaaatcag gaaagataga 4440 gaagacctgc tggcccatct aactttaaag gcaaaagtgc agttcacaga aaagccaatg 4500 ttctgtgggt ggtacatcaa gaagatggga attgtgaagg agccaagatt agtgcttgag 4560 aggtggttga tagctgaaag aaagaaggtg atagatcaat gcttcatcaa ctactcaatc 4620 gaggtatctt atggatacag attaggtgag tacctctggg agtattttga taatttagag 4680 gatttccaag cgatagtgag attggtgata aagaagaaga aacaattgcc accagctata 4740 agaagaattt ttgaaacaag taatggagtt gatttcagtg gagaagttca ggagacaatg 4800 ggaagagagg gagagcatca cgggtcctgt ggactctggt gcaatctaca ctaactccgc 4860 gtttcacaat ctgaagacca aatggcacgt ttacaagtct gagtgcagca ttggtcttga 4920 tttgcccgat aacggaaaaa taatatcaaa ggacatcccc ctctttgatc aagaggaaat 4980 tgataacatc ataaaagacg acaaacaggt attcgtccat ctgggagcct ttgtgttcgg 5040 acttgttgca cactttcctg tcgatgagga agtggaagga ttagtctcta tcatcgacaa 5100 acgtcggact gatctgagga gggcaaccct agcttgcaga aaaattaaat ttgtaaatgg 5160 aagatgcgcc ttcatgatga aaccaaactt ttcagtcagg aaggaggatt taagggacgg 5220 tgtcactttt tgtgccgcta tcaaaatcaa aaatcttggc tttgaaggtg ggttctttcc 5280 attttcagca tgtggcggag tgatttacag aacttcaaat gtgagttttg caaatgctgt 5340 tgataaaacc tttgcttcta ggactgttca tgatttagtg ggtactgatg tactctcttt 5400 agatcaactg gaccaagcca ctctggagga tcttgaggaa gtgagaagaa gccccattct 5460 aaggttaacc gctcctgatg agagagtaat gatagaaaga gggaattggt tccagaaaaa 5520 accggcaata aggaggagaa gttttgggaa aaggaggccc caaaaatgtt cgtcagttag 5580 gtcggcgagt ttgcctcgat tttcatgttc tgagaggtta gagaggggct ttgaatcaga 5640 gagtctggct ggattagtgc tagatcagaa atatggatcc aacaactttt gtgcagacaa 5700 gagacgaagt cctgaatctg acagtggcag cttacagcag tcaatgggac agtcaagcca 5760 ctcaggctct gaaggatggg gcaaaggaac agatgttgcg attcctcttc ggaagaatcg 5820 caatatcttc agcgagtaga aacaccattt ggcctgatgt ggagatcacg tcggaggatc 5880 ttcagatagg tatgtcagcg gcttcagcgg gtccaccttc agtggctgct gctccggtaa 5940 gccttatatt cagggtaaat tttaattctt atgttaaaat gctaatagct ttgtccaaca 6000 cttcgacaaa tccctttgtt aaaaataaaa cactcagaca aatgtgtatg ccttttgcaa 6060 aatatgctta tggatactta tctgaaatgg gctatgcaac ctgggcatat gagaaaatgc 6120 ccaaactttg tcggaaggct aaatgggttg ctttcgattt tgcatctggg ttgttgattg 6180 atacaacgat gcagttgaat gatgatgaaa agaccgttat tcaaggtctg ggagctaggt 6240 tattcaaaac tcaacagtca attcagattg ctgattccac aatggacggt gaagctatca 6300 atcgtgaaat ttgactgagg aaaaggagaa gagttggtcg tttgttaaat ccgcacaatt 6360 ggtcgcggtc ttgagggttg actggccctc atctgaataa atttgaaatc tgcataattg 6420 atcgcagtct agggagttga tatgctcccc ccgatgttct taatctaggg tttgcacagt 6480 ttttcaagtt tttaaagcaa 6500 //