ID JQ305797; SV 1; circular; genomic DNA; STD; VRL; 2777 BP. XX AC JQ305797; XX DT 01-APR-2012 (Rel. 112, Created) DT 14-DEC-2012 (Rel. 115, Last updated, Version 2) XX DE Clerodendrum golden mosaic China virus isolate ClGMCNV-Sal[USA:LA:11] DE segment DNA-A, complete sequence. XX KW . XX OS Clerodendrum golden mosaic China virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2777 RX AGRICOLA; IND44686525. RA Valverde R.A., Singh R., Sabanadzovic S.; RT "Detection and identification of Clerodendron golden mosaic China virus in RT Salvia splendens "; RL Eur. J. Plant Pathol. 133(3):499-503(2012). XX RN [2] RP 1-2777 RA Sabanadzovic S., Valverde R.A.; RT ; RL Submitted (18-DEC-2011) to the INSDC. RL Biochemistry, Molecular Biology, Entomology and Plant Pathology, RL Mississippi State University, 100 Twelve Lane Stop 9775, Mississippi State, RL MS 39762, USA XX DR MD5; 38e7c355d4fd3b323fc7ffce63dbb44a. XX FH Key Location/Qualifiers FH FT source 1..2777 FT /organism="Clerodendrum golden mosaic China virus" FT /segment="DNA-A" FT /host="Salvia splendens" FT /isolate="ClGMCNV-Sal[USA:LA:11]" FT /mol_type="genomic DNA" FT /country="USA:Louisiana" FT /collection_date="2011" FT /db_xref="taxon:559878" FT CDS 102..479 FT /codon_start=1 FT /product="AV2" FT /note="movement protein" FT /db_xref="GOA:H9NHG2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:H9NHG2" FT /protein_id="AFF58886.1" FT /translation="MLTGHICMSDMWDPLVNEFPETVHGLRCMLAVKYLKYVENTYSPD FT TLGYDLIRDLVLVIRAKNYGEATRRYNHFHARLQGSTEVELRQPVSEPCACPHCPRHTK FT TVMGQQAHVSEAQTIPSVQGP" FT CDS 292..1062 FT /codon_start=1 FT /product="AV1" FT /note="coat protein" FT /db_xref="GOA:H9NHG3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:H9NHG3" FT /protein_id="AFF58887.1" FT /translation="MAKRPGDIIISTPVSKVRRRLNFDSPYQSRVPALTARGTRKQLWA FT NRPMYRKPRLYRVYRGPDVPRGCEGPCKVQSFEQRHDIAHTGNVICISDVTRGNGITHR FT VGKRFCVKSVYVLGKVWLDENIKTKNHTNTVMFYVVRDRRPYGTPMDFGQVFNMYDNEP FT STATIKNDLRDRFQVIRKFYSTVTGGQYANKEQALVKKFMRVNNHVVYNHQEAAKYENH FT TENALLLYMACTHASNPVYATLKIRIYFYDSVSN" FT CDS complement(517..996) FT /codon_start=1 FT /product="AC5" FT /db_xref="GOA:H9NHG8" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:H9NHG8" FT /protein_id="AFF58892.1" FT /translation="MGTCHIQQQSIFRMILILSGLLMVINNMIINPHKFLHKRLLLICV FT LTTGHSRIKLPYNLETISKIVLNGRSAWLVVIHIKHLAKIHRSTIGAPIPNYIEHNSIG FT VILSLDIFIQPHLTQYINGLNTKTFTNTMGNAIPTCYIGNTNDIPGMGYVMPLLE" FT CDS complement(1059..1463) FT /codon_start=1 FT /product="AC3" FT /note="replication enhancer protein; REn" FT /db_xref="GOA:H9NHG6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:H9NHG6" FT /protein_id="AFF58890.1" FT /translation="MDSRTGEIITATQAESGVFIWEVPNPLYFKVTEHDSKPFNMNHDI FT ITVQIQFNHNLRKALGLHKCFLTFRIWTRLTPPTGRFLRVFRSECCKYLNNLGVISINN FT VIRTVTHVLNDVIEGTLDVIEKHSIKFIVY" FT CDS complement(1204..1611) FT /codon_start=1 FT /product="AC2" FT /note="transcriptional activation protein; TrAP" FT /db_xref="GOA:H9NHG5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:H9NHG5" FT /protein_id="AFF58889.1" FT /translation="MLNSSPSQSHSSQVPIKVQHKISKRRPTRRRRVDLECGCSYYLSI FT DCHNHGFTHRGNHHCNSGGEWRFYLGGAKSPLFQSNGTRLEAVQHESRHNHRPDTIQPQ FT PEESTGTSQMLPHISNLDTFDSADWEIFKGF" FT CDS complement(1511..2689) FT /codon_start=1 FT /product="AC1" FT /note="replication associated protein; REP" FT /db_xref="GOA:H9NHG4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:H9NHG4" FT /protein_id="AFF58888.1" FT /translation="MPLGDKVYIVHQSPIHSTEFVVTDTKTTILMAPPRRFRVSAKNYF FT LTYPHCSVTKDETLSQLRTINTQVNKKYIKVCRELHEDGSPHLHVLIQFEGKFVCTNNR FT LFDLVSPTRAAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQSANDA FT YAQALNTGSKQDALRIIRELAPKDFILQFHNLSSNLDRIFAPEVPVYTSPFLSSSFNRV FT PEELEVWVSENVKSAAARPLRPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVY FT SNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPGAS FT YIEFLNEEKQTALKNWALKNAEFVSLTEPLFSSPNQGPTQDFQEEANTTTEG" FT CDS complement(2152..2442) FT /codon_start=1 FT /product="AC4" FT /note="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H9NHG7" FT /protein_id="AFF58891.1" FT /translation="MGALISMCLYNSKANSSAQITDCSTWSPQPGQHISIRTYRELNPA FT PTSSPILIRTGTHWNGGNFRSTDDLQGAVNNQQTMLTPKRLTQEVSRMLLG" XX SQ Sequence 2777 BP; 727 A; 577 C; 643 G; 830 T; 0 other; accgggtggc cgcgcttttt tcgctcaaag tgggtcccgc agaaaataat ggccaatcag 60 atgagtccct tcgagcctaa tagtcaaaag ttggcctata aatgttgact ggtcatattt 120 gcatgtcaga catgtgggat ccactagtta atgaattccc tgagactgta catggtctca 180 ggtgtatgct tgctgtgaag tacttaaaat acgtagaaaa tacgtattca ccggatacac 240 tcgggtacga tttaattcgt gatcttgtac ttgttattcg tgccaaaaat tatggcgaag 300 cgacccggag atataatcat ttccacgccc gtctccaagg ttcgacggag gttgaacttc 360 gacagcccgt atcagagccg tgtgcctgcc ctcactgccc gaggcacacg aaaacagtta 420 tgggccaaca ggcccatgta tcggaagccc agactatacc gagtgtacag gggccctgat 480 gttcccaggg gatgtgaagg cccatgtaag gttcaatcat tcgagcagag gcatgacata 540 gcccataccg ggaatgtcat ttgtatttcc gatgtaacac gtgggaatgg cattacccat 600 cgtgttggta aacgtttttg tgttaagtcc gtttatgtat tgggtaaggt gtggctggat 660 gaaaatatca agactaagaa tcacaccaat actgttatgt tctatgtagt tagggatagg 720 cgcccctatg gtactccgat ggattttggc caggtgttta atatgtatga caacgagcca 780 agcactgcga ccattaagaa cgatcttaga gatcgtttcc aagttatacg gaagttttat 840 tcgactgtga ccggtggtca gtacgcaaat aaggagcagg cgcttgtgaa gaaatttatg 900 agggttaata atcatgttgt ttataaccat caagaggccg ctaagtatga gaatcatacg 960 gaaaatgctt tgctgttgta tatggcatgt acccatgcat ccaatcccgt gtatgctacg 1020 ttgaaaatac gtatctattt ctatgattct gtatcaaatt aataaactat gaattttatt 1080 gagtgttttt cgattacatc taaagtccct tcaattacat cattcagtac atgcgtgact 1140 gttctaatta cattgttgat cgaaataaca cctaaattat tcaagtactt gcaacattca 1200 ctcctaaaaa cccttaaaaa tctcccagtc ggcggagtca aacgtgtcca gattcgaaat 1260 gtgaggaagc atttgtgaag tcccagtgct ttcctcaggt tgtggttgaa ttgtatctgg 1320 acggtgatta tgtcgtgatt catgttgaac ggcttcgagt cgtgttccgt tactttgaaa 1380 tagaggggat ttggcacctc ccagataaaa acgccactct ccgcctgagt tgcagtgatg 1440 atttcccctg tgcgtgaatc catggttgtg gcagtcgatc gatagataat acgagcaacc 1500 acactcgagg tcaaccctcc gtcgtcgtgt tggcctcctc ttggaaatct tgtgttggac 1560 cttgattggg acttgagaag agtggctctg tgagggagac gaattcagca ttctttaaag 1620 cccagttctt gagtgctgtt tgtttttcct cgtttaaaaa ctctatgtag ctggcacctg 1680 gtcccggatt gcagagaaag atagtgggaa tcccaccttt aatttgaact ggctttccgt 1740 attttgtgtt gctttgccag tccctctggg cccccatgaa ttctttaaag tgtttcagat 1800 aatggggatc aacgtcatca atgacgttgt accacgcgtc gttgctgtaa accttgggac 1860 tcaagtctag gtgaccacat aaataattgt gtggtccaag agatctggcc cacatcgtct 1920 ttcctgtacg actatcgccc tcgataacaa ttgatttagg tcttaatggc cgcgcagcgg 1980 cactcttgac attttctgaa acccatactt cgagttcctc tggaactcgg ttgaaagaag 2040 aagaaagaaa cggtgacgta taaacaggca cctctggtgc gaagatccta tctaaatttg 2100 aacttaaatt atgaaactgt aaaataaaat cttttggggc taattcccta attatcctaa 2160 gagcatcctg cttacttcct gtgttaagcg cttgggcgta agcatcgttt gctgattgtt 2220 gaccgcccct tgcagatcgt ccgtcgatct gaaattcccc ccattccagt gtgtccccgt 2280 ccttatcaat ataggacttg acgtcggagc tggatttagc tccctgtatg ttcggatgga 2340 aatgtgctgc cctggttggg gagaccaggt cgaacaatct gttatttgtg cagacgaatt 2400 tgccttcgaa ttgtataagc acatggagat gagggctccc atcttcgtgc agctctctgc 2460 agactttgat atatttctta ttgacttgag tatttatggt acgaagttgt gatagcgttt 2520 cgtctttggt gacggagcaa tggggataag tgaggaaata atttttggca gaaactctaa 2580 aacgacgtgg aggagccatt aaaattgtcg ttttggtatc ggtgacaaca aactctgtgg 2640 aatgaattgg tgactggtgt acaatatata ccttgtcacc taatggcata ttcgtaaata 2700 tccctacaac ttttggaatt tgaatttgaa ttttgaatta aattcggctc caaaagcggc 2760 cacccgttac taatatt 2777 //