ID   JQ303122; SV 1; circular; genomic DNA; STD; VRL; 2630 BP.
XX
AC   JQ303122;
XX
DT   01-APR-2012 (Rel. 112, Created)
DT   03-SEP-2012 (Rel. 114, Last updated, Version 3)
XX
DE   Pepper huasteco yellow vein virus- San Luis Potosi, complete genome.
XX
KW   .
XX
OS   Pepper huasteco yellow vein virus- San Luis Potosi
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2630
RX   PUBMED; 22684489.
RA   Banuelos-Hernandez B., Mauricio-Castillo J.A., Cardenas-Conejo Y.,
RA   Guevara-Gonzalez R.G., Arguello-Astorga G.R.;
RT   "A new strain of tomato severe leaf curl virus and a unique variant of
RT   tomato yellow leaf curl virus from Mexico";
RL   Arch. Virol. 158(9):1835-1841(2012).
XX
RN   [2]
RP   1-2630
RA   Banuelos-Hdz B., Mauricio-Castillo J.A., Cardenas-Conejo Y.,
RA   Arguello-Astorga G.R.;
RT   ;
RL   Submitted (18-DEC-2011) to the INSDC.
RL   biological control, Universidad Autonoma de Zacatecas, Jardin Juarez 147,
RL   Zacatecas, zac. 98000, Mexico
XX
DR   MD5; 63c65c681e96a27deba14cebb4a97cef.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2630
FT                   /organism="Pepper huasteco yellow vein virus- San Luis
FT                   Potosi"
FT                   /segment="DNA-A"
FT                   /host="Solanum lycopersicum"
FT                   /strain="San Luis Potosi"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico"
FT                   /collection_date="01-Jul-2011"
FT                   /db_xref="taxon:1166473"
FT   gene            210..965
FT                   /gene="CP"
FT   CDS             210..965
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:H9NK34"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:H9NK34"
FT                   /protein_id="AFF60018.1"
FT                   /translation="MPKREAPWRLTAGTTKISRTGNSSRALIMGPTTSRASAWVNRPMY
FT                   RKPRIYRMYRSPDVPKGCEGPCKVQSFEQRHDVSHVGKVICISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRYQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRVYFYDSIMN"
FT   gene            complement(962..1360)
FT                   /gene="C3"
FT   CDS             complement(962..1360)
FT                   /codon_start=1
FT                   /gene="C3"
FT                   /product="REn"
FT                   /note="replication enhancer protein"
FT                   /db_xref="GOA:H9NK37"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:H9NK37"
FT                   /protein_id="AFF60021.1"
FT                   /translation="MDLRTGEPITAAQATNGVFIWELPNPLYFKIMHVETPMYTNSRVF
FT                   HIQVRANHNMRRALGLHKAYFNFQVWTTLTTISGQIYLNRFKLLVMFYLDNLGVISVNN
FT                   VVRAVSFATDKRYVNAVLENHEIIYKLY"
FT   gene            complement(1107..1523)
FT                   /gene="C2"
FT   CDS             complement(1107..1523)
FT                   /codon_start=1
FT                   /gene="C2"
FT                   /product="transactivation associated protein"
FT                   /note="TrAP"
FT                   /db_xref="GOA:H9NK35"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:H9NK35"
FT                   /protein_id="AFF60019.1"
FT                   /translation="MTGSKKTPSTSPSKNLSSPPEVKLRHRFAKRQIRRRRVDLGCGCS
FT                   IYININCSNYGFTHRGTHHCSSSNEWRFYMGASKSPIFQNNACGDANVHKQPCISHSGQ
FT                   SKPQHEESAGSPQSLLQLPSLDDVDDDFWADLLK"
FT   gene            complement(1444..2493)
FT                   /gene="C1"
FT   CDS             complement(1444..2493)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="replication protein"
FT                   /note="Rep"
FT                   /db_xref="GOA:H9NK36"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:H9NK36"
FT                   /protein_id="AFF60020.1"
FT                   /translation="MPLPKRFRLNAKNYFLTYPQCSISKEEALAQIQNLSTPVNKKYIK
FT                   ICKESHEDGQPHLHVLIQFEGKYQCTNNRFFDLVSSTRSAHFHPNIQGAKSSSDVKTYI
FT                   DKDGDTLEWGELQIDGRTARGGQQSANDTYAKALNSASAEEALQIIKEEQPQHFFLQFH
FT                   NIVSNANRIFQTPPEPWVPPFQQASFNNVPAIMTEWVSDNVCDAAARPLRPLSLVVEGP
FT                   SRTGKTLWARSLGPHNYICGHMDLTPKIYSNNAWYNVIDDIPPHYVKHFKEFMGAQRDW
FT                   QSNCKYGKPIQIKGGIPTIFLCNPGPQSSYKEYLSEEKNRSLNDWVQKNAIYVTIEEPI
FT                   FTTGSETSP"
XX
SQ   Sequence 2630 BP; 679 A; 528 C; 620 G; 803 T; 0 other;
     accggatggc cgaccgcttc ccttatcttt ccgtactgct ttaatttgaa ttaaagatgt        60
     tacttttatg ctatccaatg agcgtgcgtc tggcgagctt agataaccgt tccagacgtg       120
     gggaccaagt agtgtctgac cactttattg actggcagct ttataaattc aaattaaaac       180
     ataagtggtc catgtacctt taattcaaaa tgcctaagcg tgaagctcct tggcgattaa       240
     cggcggggac caccaagatt agccgaactg gcaatagttc gcgggctctt atcatgggcc       300
     cgactaccag cagggcctca gcttgggtta atcgcccaat gtacaggaag ccccggattt       360
     atcgtatgta cagatctccg gatgtgccga aaggttgtga agggccgtgt aaggtccaat       420
     cgtttgagca acgacatgat gtctctcatg ttggtaaggt tatttgtata tccgacgtca       480
     ctcgtggtaa tggtattacc catcgtgttg gcaaacgatt ctgcgttaag tccgtctata       540
     ttctgggcaa aatctggatg gatgaaaata ttaagttgaa gaaccatacc aacagtgtca       600
     tgttttggtt ggttagggat cgtagaccct acggtacgcc tatggatttt ggccaagttt       660
     ttaacatgta cgacaatgag cccagcaccg ccactgtgaa gaacgatctt cgggatcgtt       720
     atcaagttat gcataggttc tatgctaagg tcactggtgg gcaatatgct agcaacgagc       780
     aagctttggt gcggcgtttc tggaaggtca acaaccatgt tgtgtacaac catcaggaag       840
     ctggcaaata tgagaaccac actgagaatg cgctgttatt gtatatggca tgtactcatg       900
     catctaatcc cgtgtatgca acactcaaaa ttcgggtcta tttttacgac tcgataatga       960
     attaataaag tttgtatatt atttcatggt tttcaagtac agcattgaca taacgtttgt      1020
     ctgtagcaaa cgaaacagcc ctaactacat tgttaactga aataacacct aagttatcta      1080
     gataaaacat gacaagcaac ttaaatctat ttaagtaaat ctgcccagaa atcgtcgtca      1140
     acgtcgtcca gacttggaag ttgaagtagg ctttgtggag acccagcgct ctcctcatgt      1200
     tgtggtttgc tctgacctga atgtgaaata cacggctgtt tgtgtacatt ggcgtctcca      1260
     catgcattat tttgaaatat aggggatttg gaagctccca tataaaaacg ccattcgttg      1320
     cttgagctgc agtgatgggt tcccctgtgc gtaaatccat agttactgca gttaatattt      1380
     atgtatatag aacagccgca accgagatca acacgtctac gtcgtatctg tctcttcgca      1440
     aatctatggc gaagtttcac ttccggtggt gaagataggt tcttcgatgg tgacgtagat      1500
     ggcgtttttt tggacccagt cattgaggct cctatttttc tcttcgctga ggtactcttt      1560
     ataggaagac tgggggcccg gattgcaaag aaagatagtg ggtatcccac ctttaatttg      1620
     aattggtttg ccgtatttac agtttgattg ccaatcccgt tgggccccca taaactcttt      1680
     aaagtgctta acataatgcg gagggatgtc atcaatgacg ttataccatg cattattgga      1740
     gtagattttt ggagtgagat ccatatgacc acatatgtaa ttgtgtgggc cgagacttcg      1800
     ggcccataat gttttgcctg tccgtgaagg accctcgacc actaatgaca atggtctcag      1860
     cggccgcgca gcggcatcac atacattatc agagacccat tctgtcatta ttgcaggcac      1920
     attattaaag gacgcctgct gaaacggagg aacccacggt tctgggggag tttggaatat      1980
     ccgattagcg tttgacacaa tgttatgaaa ttgtaagaag aaatgctggg gttgttcttc      2040
     ctttatgatc tgcagtgctt cttctgcaga tgctgaattt aacgccttag catatgtgtc      2100
     attagcagat tgctgccctc ctctagcagt tctgccgtct atttgtaatt ctccccattc      2160
     taatgtatcg ccgtctttgt cgatgtacgt cttgacgtcg gagcttgatt tagctccctg      2220
     aatgttcgga tggaaatgtg ctgatctggt agaggatacg aggtcaaaga atcggttgtt      2280
     cgtgcattgg tattttcctt cgaactgaat aagcacgtgc aaatgaggtt gcccatcttc      2340
     atgagattct ttgcatatct tgatgtattt cttgtttacc ggcgtcgaga ggttttgtat      2400
     ttgagcgaga gcctcttctt tggaaatgga acattgagga taggtgagga aataattctt      2460
     ggcatttaaa cgaaatcgtt taggcaatgg catatttgta ataagagagg tgtacaccga      2520
     ttggagctct ttaacctgtg cttatggtat tggtgtattg gtagccaata tatagtatat      2580
     gggagttatc taggatcttc gtacacgtgg aggccatccg ttataatatt                 2630
//