ID   JQ178365; SV 1; linear; genomic DNA; STD; VRL; 1195 BP.
XX
AC   JQ178365;
XX
DT   13-FEB-2012 (Rel. 111, Created)
DT   13-FEB-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Tomato leaf curl Karnataka virus-[Jatropha curcas] coat protein (AV1) gene,
DE   partial cds; replication enhancer protein (AC3) and transcriptional
DE   activator protein (AC2) genes, complete cds; and replication-associated
DE   protein (AC1) gene, partial cds.
XX
KW   .
XX
OS   Tomato leaf curl Karnataka virus-[Jatropha curcas]
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1195
RA   Raj S.K., Snehi S.K., Srivastava A.;
RT   "Molecular identification of Tomato leaf curl Karnataka virus associated
RT   with mosaic disease on Jatropha curcas in India";
RL   Unpublished.
XX
RN   [2]
RP   1-1195
RA   Raj S.K., Snehi S.K., Srivastava A.;
RT   ;
RL   Submitted (24-NOV-2011) to the INSDC.
RL   Plant Molecular Virology, CSIR-National Botanical Research Institute, Rana
RL   Pratap Marg, Lucknow, U. P. 226001, India
XX
DR   MD5; 0c24355a03a895681dbfe8cb4e986310.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1195
FT                   /organism="Tomato leaf curl Karnataka virus-[Jatropha
FT                   curcas]"
FT                   /host="Jatropha curcas"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /collected_by="Sunil Kumar Snehi"
FT                   /collection_date="Nov-2011"
FT                   /db_xref="taxon:1143717"
FT   gene            <1..375
FT                   /gene="AV1"
FT   CDS             <1..375
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:H6WCZ2"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:H6WCZ2"
FT                   /protein_id="AFA26478.1"
FT                   /translation="NSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNMHRDRYQ
FT                   VLSTGHASVTGEQYASKEQALVKKVVRVIKYCVYNQQEARKYENQSENALMLYMACTHA
FT                   SNPVYATMKIRIYFYDPVSN"
FT   gene            complement(372..776)
FT                   /gene="AC3"
FT   CDS             complement(372..776)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication enhancer protein"
FT                   /db_xref="GOA:H6WCZ3"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:H6WCZ3"
FT                   /protein_id="AFA26479.1"
FT                   /translation="MDSRTGELITAAHAENGVFIWEIQNPLYFKITEHHNRPFLMNQDI
FT                   ITVQVQFNHNLRKVLGIHKCFLVFRIWMTSQPPTGRFLMVFKTQVLKYLNNLGVISINN
FT                   VIRAVDHVLWNVLHHVVYVNQTYFIKFNIY"
FT   gene            complement(517..921)
FT                   /gene="AC2"
FT   CDS             complement(517..921)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transcriptional activator protein"
FT                   /db_xref="GOA:H6WCZ4"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:H6WCZ4"
FT                   /protein_id="AFA26481.1"
FT                   /translation="MRSSSPSKAHSTQVPIKVTHRLAKKGNRRRRVDLPCGCSYFIALA
FT                   CHDHGFTHRGTHHCSSCREWRVYLGDSKSPIFQDNRASQPAIPDEPRHHHRPSTVQSQP
FT                   EESVGDTQMFPSLPNLDDLTASDWSFLNGI"
FT   gene            complement(824..>1195)
FT                   /gene="AC1"
FT   CDS             complement(824..>1195)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replication-associated protein"
FT                   /db_xref="GOA:H6WCZ5"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="UniProtKB/TrEMBL:H6WCZ5"
FT                   /protein_id="AFA26480.1"
FT                   /translation="YLCGHLDLSHKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS
FT                   NIKYGKPVQIKGGIPTIFLCNPGPKSSYKEFLDEEENIGLKNWAVKNAIFVTLEGPLYS
FT                   GSNQSDAQASQEGEQASSC"
XX
SQ   Sequence 1195 BP; 326 A; 234 C; 267 G; 368 T; 0 other;
     aacagtgtca tgttttttct tgttcgtgac cgtcgtcctg ttgacaagcc acaagacttt        60
     ggagaggtgt tcaatatgtt tgacaacgag cctagcactg ctactgttaa gaatatgcac       120
     agagatcgtt atcaggtgtt gagtactggc catgcatctg tcaccggtga acagtacgcg       180
     tcaaaggaac aggcattagt gaagaaggtt gtaagggtca ttaagtattg tgtttataac       240
     cagcaggagg ctaggaaata tgagaatcag tctgagaatg cattgatgtt gtatatggcg       300
     tgtactcacg cctctaaccc tgtgtatgct actatgaaga tacggatcta tttctatgat       360
     ccagtatcga attaataaat attgaatttt atgaaatatg tttggtttac atatacaacg       420
     tggtgtaata cattccataa tacatgatca acggctctaa ttacattgtt aatactgata       480
     actcctaaat tatttaaata cttaagcact tgggtcttaa ataccattaa gaaacgacca       540
     gtcggaggct gtgaggtcat ccagattcgg aagactagga aacatttgtg tatccccaac       600
     actttcctca ggttgtgatt gaactgtact tggacggtga tgatgtcttg gttcatcagg       660
     aatggccggt tgtgatgctc tgttatcttg aaatataggg gattttgaat ctcccagata       720
     aacacgccat tctctgcatg agctgcagtg atgagttccc ctgtgcgtga atccatggtc       780
     gtggcaggct aatgctatga agtaagaaca gccgcacggt agatcaacac gacgacgcct       840
     gttccccttc ttggctagcc tgtgcgtcac tttgattgga acctgagtag agtgggcctt       900
     cgagggtgac gaagatcgca ttctttacag cccaattttt aagtccaata ttttcctctt       960
     catccaagaa ttctttatag ctagatttgg gtcctggatt gcagaggaag atagtgggaa      1020
     ttccgccttt aatttgaact ggctttccgt attttatatt gctttgccag tccctttggg      1080
     cccccatgaa ttccttaaag tgctttagat aatgcggatc aacgtcatca atgacgttat      1140
     accacgcatc attattgtag accttatgac taaggtctaa gtgaccacac agata           1195
//