ID JQ082302; SV 1; linear; viral cRNA; STD; VRL; 6531 BP. XX AC JQ082302; XX DT 05-FEB-2012 (Rel. 111, Created) DT 20-MAR-2012 (Rel. 112, Last updated, Version 2) XX DE Sangassou virus strain SA14 RNA polymerase (L) gene, complete cds. XX KW . XX OS Orthohantavirus sangassouense OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Hantaviridae; Mammantavirinae; OC Orthohantavirus. XX RN [1] RP 1-6531 RX PUBMED; 22278233. RA Klempa B., Witkowski P.T., Popugaeva E., Auste B., Koivogui L., RA Fichet-Calvet E., Strecker T., Ter Meulen J., Kruger D.H.; RT "Sangassou virus, the first hantavirus isolate from Africa, displays RT genetic and functional properties distinct from those of other RT murinae-associated hantaviruses"; RL J. Virol. 86(7):3819-3827(2012). XX RN [2] RP 1-6531 RA Klempa B., Witkowski P.T., Popugaeva E., Auste B., Koivogui L., RA Fichet-Calvet E., Ter Meulen J., Kruger D.H.; RT ; RL Submitted (28-NOV-2011) to the INSDC. RL Institute of Virology, Helmut-Ruska-Haus, Charite Medical School, RL Chariteplatz 1, Berlin 10117, Germany XX DR MD5; 00d9c109b84c5b2835c6e4a5de026996. DR EuropePMC; PMC4054438; 24741077. XX FH Key Location/Qualifiers FH FT source 1..6531 FT /organism="Orthohantavirus sangassouense" FT /segment="L" FT /host="Hylomyscus simus" FT /lab_host="Vero E6 cells" FT /strain="SA14" FT /mol_type="viral cRNA" FT /country="Guinea" FT /isolation_source="spleen" FT /collection_date="2004" FT /db_xref="taxon:3052496" FT gene 38..6493 FT /gene="L" FT CDS 38..6493 FT /codon_start=1 FT /gene="L" FT /product="RNA polymerase" FT /note="RNA-dependent RNA polymerase" FT /db_xref="GOA:H6WCR0" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR016268" FT /db_xref="InterPro:IPR024378" FT /db_xref="UniProtKB/TrEMBL:H6WCR0" FT /protein_id="AEZ02948.1" FT /translation="MEKYREIHRILQAHHINSLTAVECIDYLDRLYAIRHDIVDQMIKH FT DWSDNKDAEEPIGKVLLFAGIPNNIITALEKKIIPDHPSGKTLKAFFKMTPDNYKITGA FT LIEFVEVTVTTDVDKGIREKKLKYESGLKYLEQELHTFFLKGEIQQPYKITLQVVSVRT FT DGSNISTQWPSRRTDGVVQYMRLVQAEISYVREHLVKAEERAALEAMFNLKFNISSLKT FT QPYFIPEYKGINLIAPKIDGLLQHTKEWLSKTHSFSFYEVKGSAVFDCFNSNEATHGTR FT YPMSKQPRNFLLIQCSLISSYKPATILSDQVDSRRACNQFLSIIPETPVSSLIHDIAYK FT YSNLTREDMLAFYSPRIHFNATQNVKEPGTFKLTATSLRPDSKAMLDILSKHNACEKKG FT ALIESLNISSHITQSDCVSLVTKILSDLELNITETSIHESFTTKHTYVDNVLEKFFKNE FT TQRYLIDVLKKTTAWHIGHMIRDITESLIAHSGLRRSKYWSLHAYNNGSVILFILPSKS FT LEVAGSFVRFVTAFKMGPGLVDKDNLDSVIADQGCIWGISKVMSLDLNRLLALNIAFEK FT ALVATATWFQYYTEDQGQFPLQHAVRSVFAYHFLLSVCQKMKICAIFDNLRYLIPAVTS FT LYSGFPSLIEKLFERPFKSSLEVYIYYNIKSLLVALAQNNKARFYSKVKLLGLTVDQST FT VGASGIYPSFLSRVVYKHYRSLISEVTTCFFLFEKGLHGNVNEEAKIHLETVEWAIKFR FT KKEETYGEVLVEGGYTLDDLCQHPELVEQQLYCQEAVELAAAELNLILLTKSQVVANSM FT LSKYWETPYFSQTRNISLKGMSGQVQEDGHLSSSVTIIEAIRYLSNSQQNPSVLKLYEE FT TRKIKAQARIVRKFQRTEADRGFFITTLATRCRLEIIEDYYDAISKNVAEEYISYGGER FT KILCIQSALEKALRWASGESFIDLSNGKFIRMKRKLMYVSADATKWSPGDNSAKFRRFT FT AAVHNGLPDERLKNCVIDALRQIYKTDFFMSRKLRRYIDSMETLEPHVKEFCDFFPDGH FT HGEVRGNWLQGNLNKCSSLFGVAMSLLFKRLWQELFPELDCFFEFAHHSDDALFIYGYL FT EPVDDGTDWFLYVSQQIQAGKLYWYSVNTEMWKSMFNLHEHILLLGSIKISPKKTTLSP FT TNAEFLSTFFEGCAVSIPFVKILLGSLSDLPGLGYFDDLAAAQSRCVKALDMGASPQIA FT QLAVALCTSKVERLYGTALGMVNHPATYLQVKHEDTPIPLGGNGSMSIMELATAEIGMS FT DKNLLKRALLGFMHKRQKQMVYILGLFKFLMNLSKDTFQHERLGEFSFMGKVQWKIFIP FT KSEFEFSDMYTHKFLKIWSDQHATYDYIIPKGRDNLIIYLVRKINDPSIVTAMTMQSPL FT QLRFRMQAKQHMKVCKLGEDWVTFREVLAAAHSFASTYEVSQIDLDLFQTLTDCTFSKE FT YAWKDFLNSVHCDVIPTKQVQRAKVARTFTVREKDQIIQNSIPAVIGYKFAISIDEMSD FT VLDVARFPDSLAVDLKTMKDGVYRELGLNISDPEVMKKVAPMLYKSAKSRVVIVQGNVE FT GTAESICAYWLKTMSLVKTIRVKPHKEVLRAVSIFNRKEDIGQQKDLAALRLCIEIWRW FT SKANNAPYKEWFHALWFEDKTFSEWLDRFIRVGVPPVDPEIQCAALMIADIKGDLSVLQ FT LQANRRAYSGKQYDAYCVQTYNEVTKLYEGDLRVTFNFGLDCARLEIFWEKQTYILETS FT ITQKHVLKIMMDEVTKELLRCGMRFKTEQVSGARHLVLYKTESGFEWGKPNIPCIVYKN FT CALRTGLRTNHAINHKFMISIKDDGLRAIAQFDEESPRFLLAHAFHTIKDIRYQAVDAV FT SNVWFYHKGVKLFLNPIISSGLFENFLKNLPAAIPPAAYSLIMNRAKISVDLFMFNDLL FT RLINPNNVLDLSGLQPTEDGFSTVSSMSSRLWSEEVSFVDDDEEMEDEFTIDLQDVDFE FT NIDMEADIEHFLQDESSYTGDLLIMSEETEVKKMRGIVKLLEPVKLIKSWVSKGLSIEK FT VYSPVNIILMTRYLSKNFSFSDKQVSLLDPYDLTELESIVKGWGESVVDQFETLDKEAQ FT HLVISKGICPEDVVPDSLFSFRHTIVLLRRLFPPDSVTTFY" XX SQ Sequence 6531 BP; 2049 A; 1086 C; 1398 G; 1998 T; 0 other; tagtagtaga ctccggaaga gacagtctac taaagaaatg gaaaaataca gagagattca 60 tagaatctta caggctcacc acataaactc attgactgca gtggaatgta tcgattatct 120 tgatcggctt tatgctatcc ggcatgacat tgtagaccaa atgatcaagc atgactggtc 180 agacaataag gatgctgaag agccaatagg caaagtcttg ctttttgcag gtatacctaa 240 caacataatt actgctttag aaaagaaaat cataccagac cacccaagtg ggaagacact 300 taaggcgttc tttaaaatga ccccggataa ttataaaatc actggagccc taattgagtt 360 tgttgaggta actgtgacta cagatgtcga taaaggaatt agggaaaaga agttaaagta 420 tgaatcgggg ttgaagtatt tagaacaaga acttcacacg tttttcttga agggtgaaat 480 tcaacagcct tataaaatca ctctccaagt agtctcagtg agaactgatg gttctaatat 540 ctcaacacag tggccaagta gaaggactga tggggtagtt caatacatga ggcttgtaca 600 ggcagaaatt agttatgtga gagaacatct tgtaaaggct gaagagaggg cagcactaga 660 agctatgttt aacttaaagt ttaatataag cagcttgaag acacaacctt attttatccc 720 tgagtataag gggattaatc ttattgcacc aaaaattgat gggttacttc aacacacaaa 780 agagtggtta tctaaaacac attccttttc attttatgaa gttaaaggct cagctgtttt 840 tgactgtttc aactctaatg aggccacaca tgggactaga tacccaatgt caaagcagcc 900 cagaaatttt ttacttattc agtgttcttt gatctcatcc tataagccag caacgatctt 960 atctgaccaa gttgacagta gacgggcatg taatcagttt cttagtatta tacctgagac 1020 tcctgtctct tcattgattc atgatattgc ctataaatac agcaatttaa cacgggaaga 1080 tatgcttgct ttttattcac ccaggataca tttcaatgct acacaaaatg taaaagagcc 1140 aggtactttt aaattaacag ccaccagttt gaggccagac tccaaggcaa tgcttgatat 1200 attaagtaag cacaatgcct gtgagaagaa aggtgcatta attgaaagct tgaatataag 1260 cagccatatt acacaatcgg attgtgtcag tttggtgacc aaaattttat ctgacttgga 1320 gttaaacatt acagaaacat ctattcatga atcattcact acaaagcaca cttacgttga 1380 taatgtccta gaaaaattct ttaagaatga aacacaacga tatcttattg atgtgttaaa 1440 gaaaacaaca gcatggcaca tagggcatat gataagggac attactgaga gtttaattgc 1500 acattctgga ttaaggaggt ctaaatattg gtcattgcat gcatacaaca atggcagtgt 1560 gatattattc attctgccct ccaagtcttt agaggttgca gggtcatttg tgcggtttgt 1620 tactgctttt aagatgggtc ctggtttggt ggataaggat aatcttgact ccgttattgc 1680 tgatcagggt tgtatttggg gaatttctaa agtaatgagt ttagatttga accggctctt 1740 agcacttaat attgcatttg agaaggcact tgttgcaacc gcaacatggt ttcaatacta 1800 tacggaggac cagggacagt tccccttgca gcatgctgta agatctgtct ttgcatatca 1860 ttttctcctg tcagtgtgtc agaaaatgaa aatctgtgct atattcgata accttaggta 1920 cctgattcct gctgtgacat cgttgtattc aggtttccca tccttgatcg agaaactttt 1980 tgaacgaccc tttaagagct cattggaagt ttatatttac tataacatta aaagtctctt 2040 agttgcccta gcacaaaata ataaagctag attttactca aaagttaaac tgttgggttt 2100 gactgttgac caatctacag ttggggcaag tggtatttat ccatcattct tatcacgtgt 2160 ggtgtacaag cattatcgta gcttgatatc tgaggtaaca acttgctttt tcctatttga 2220 aaaaggcttg cacggtaatg tgaatgaaga ggctaaaatt catctcgaaa cagttgagtg 2280 ggccatcaaa ttcagaaaaa aggaggagac ttatggggaa gttcttgttg aaggtggtta 2340 cacacttgat gatctatgtc agcatcctga acttgttgag caacagctat attgccagga 2400 agctgtggaa ttagctgcag cagagcttaa tcttatttta ttaacaaagt ctcaagtcgt 2460 tgcaaacagc atgttatcaa aatactggga aacaccatac tttagccaga caagaaacat 2520 aagtctgaag gggatgtctg gacaagtgca ggaagatggc cacttatctt catctgtaac 2580 aatcattgaa gccatcagat acttgtctaa ctcacaacag aatccttctg tcctaaaatt 2640 atatgaggag actaggaaaa taaaagcgca agctcgcatt gtccgaaaat ttcagaggac 2700 tgaagctgat cgtggctttt ttatcacaac tctagctact cgttgccggt tagaaattat 2760 tgaagattat tatgatgcaa tctcaaagaa tgttgcagaa gagtatattt cttacggggg 2820 tgaacgcaaa attctatgta ttcaatctgc actagagaag gctcttaggt gggcatctgg 2880 agaaagtttc atagacttaa gtaatgggaa atttattaga atgaagagaa agctcatgta 2940 tgtcagtgct gatgcaacta agtggtcacc tggggacaac tctgcaaagt tcaggagatt 3000 cacagcagca gtgcataatg gcctccctga tgagaggttg aagaactgtg tgatagatgc 3060 actccgccag atttataaga ctgacttctt catgtcaaga aaattgaggc ggtatatcga 3120 ttctatggag actctggagc cccatgtaaa ggaattctgt gatttcttcc cggatggtca 3180 tcatggtgaa gttaggggta attggttgca aggtaactta aataaatgct cttccctttt 3240 tggtgttgcc atgtcattat tatttaagag attatggcag gaattgttcc cagaacttga 3300 ttgctttttt gaatttgctc atcattcaga tgatgctttg ttcatttacg gttatctaga 3360 gccagttgac gatgggacag attggtttct atatgtctca cagcaaatac aggcagggaa 3420 gttgtactgg tatagtgtga atacagagat gtggaaaagc atgtttaatc tccatgaaca 3480 tattctgttg ctaggctcta ttaagatttc accaaagaag acgacattat caccaacaaa 3540 tgcagagttc ttatcaacat tctttgaagg ttgtgctgtt tccataccat ttgttaagat 3600 attgctaggt tcactgtcag acttacctgg ccttggttat tttgatgact tggctgctgc 3660 acagagtaga tgtgtcaagg ctttagatat gggtgcttca cctcagatcg cacaacttgc 3720 tgtggcatta tgtacaagta aagtagaaag actttatggg acagctttag gaatggtcaa 3780 tcatccagca acatatcttc aagtaaagca tgaggatact cctataccct taggagggaa 3840 tgggtctatg tccattatgg agttagcaac cgcagaaata ggtatgtctg ataaaaacct 3900 tttaaagcgg gcacttctgg gtttcatgca caagcgtcaa aagcaaatgg tttatatact 3960 tggactattt aaattcttaa tgaatttatc aaaagatacg tttcaacatg agagacttgg 4020 agaattctca tttatgggaa aagttcagtg gaaaattttc atcccaaaat ctgaatttga 4080 gttttcagac atgtatactc ataagttttt gaaaatatgg agtgaccaac atgccacata 4140 cgattatatt attccgaaag ggcgtgataa tctaattatt taccttgtga gaaaaataaa 4200 tgacccaagt attgttacag ccatgacaat gcagtcccct ttacagctaa ggttcaggat 4260 gcaggcaaaa cagcatatga aagtctgtaa attaggtgaa gactgggtga cgtttaggga 4320 agtgcttgct gctgcacata gctttgcatc aacatatgag gttagtcaaa tagacctaga 4380 cttatttcag acattgacag attgtacttt ttcaaaggag tatgcttgga aggatttctt 4440 aaatagtgtt cattgtgatg tcatacctac aaagcaagtg caaagggcaa aagttgcaag 4500 aacattcact gtcagagaaa aggatcaaat tattcagaat agtatccctg cagtaatagg 4560 ttataagttt gcaatatcaa ttgatgaaat gtcagatgtc cttgatgtgg ctagattccc 4620 tgattcactg gctgttgatt taaagacaat gaaggatgga gtgtatagag agttaggctt 4680 aaatatatct gaccctgagg ttatgaagaa ggtggcacct atgttgtata agagtgcaaa 4740 atctagggtc gttatagttc aaggaaatgt agaaggcaca gcagaatcta tctgcgccta 4800 ctggctgaag actatgtcat tagttaagac aattagggtt aagcctcata aagaggtctt 4860 gcgagctgtt tcaattttca atagaaagga agatatcggt caacagaagg acttggctgc 4920 attaaggtta tgtattgaaa tttggagatg gtcaaaagct aataatgccc catataagga 4980 gtggttccat gctctgtggt ttgaggacaa aactttttca gagtggcttg atagattcat 5040 acgagttggt gtccctcctg ttgacccaga gatacaatgt gctgctttga tgattgcaga 5100 catcaaagga gatttatctg ttctacagct tcaggctaat aggagagcat attcaggaaa 5160 acaatacgat gcttactgtg tccaaacata caatgaggtc acaaagctgt atgaaggcga 5220 tttgcgagtg acctttaatt ttggattaga ctgtgctagg ttagagatat tttgggaaaa 5280 acagacctat attctggaga cctcaataac tcagaagcac gtgttaaaga ttatgatgga 5340 tgaagtaaca aaagaacttt tacgatgtgg tatgaggttt aagactgaac aagtatctgg 5400 tgctaggcat ctagtactgt ataagactga gtctggtttt gaatggggta aacctaatat 5460 cccttgtata gtctacaaga actgtgcgct aagaacaggc ttgagaacta atcatgcaat 5520 aaaccataag ttcatgatct ctataaagga tgatggtcta cgggccattg ctcagtttga 5580 tgaagaaagt ccacgtttcc ttttagcaca tgcttttcat acaatcaagg atataaggta 5640 tcaagctgtg gatgctgtta gtaatgtttg gttttatcac aagggggtta agttattttt 5700 aaatccaatt atatcatctg gtctatttga gaattttcta aaaaaccttc ctgcagcaat 5760 tccacctgca gcttattctc taatcatgaa tagggccaaa atttcagttg atttatttat 5820 gtttaatgac cttcttcgtc tcataaatcc aaacaatgta cttgatttgt caggtctcca 5880 gccaactgaa gatgggttta gtactgttag tagtatgtcg agtcgattat ggtctgaaga 5940 ggtcagtttt gttgatgatg atgaagaaat ggaagatgag tttacaatag atttgcaaga 6000 tgtggacttt gaaaatattg acatggaagc tgatatagaa cattttctgc aggatgaaag 6060 ctcatataca ggtgatctat taatcatgtc agaagaaact gaggtgaaga aaatgagagg 6120 tattgtaaaa ctcttagagc ctgtaaaatt gataaaaagt tgggtctcaa agggtttgtc 6180 aattgaaaag gtatacagcc cagtaaatat tatattgatg acaagatatc tttccaagaa 6240 ttttagtttt tctgacaagc aggtttcact attagaccca tatgatttga cagaattgga 6300 aagtatcgtt aagggttggg gtgagagtgt tgttgaccag tttgaaacac ttgataaaga 6360 ggctcagcac cttgttatct caaaggggat ttgcccagag gatgttgttc cagactcctt 6420 gttttctttt agacatacta ttgtcttgct aagaagatta tttcctcctg attctgtcac 6480 cactttttat taatgcttat tttctttttc attttccgga gcatactact a 6531 //