ID   JQ082300; SV 1; linear; viral cRNA; STD; VRL; 1746 BP.
XX
AC   JQ082300;
XX
DT   05-FEB-2012 (Rel. 111, Created)
DT   20-MAR-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Sangassou virus strain SA14 N protein (S) gene, complete cds.
XX
KW   .
XX
OS   Orthohantavirus sangassouense
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Hantaviridae; Mammantavirinae;
OC   Orthohantavirus.
XX
RN   [1]
RP   1-1746
RX   PUBMED; 22278233.
RA   Klempa B., Witkowski P.T., Popugaeva E., Auste B., Koivogui L.,
RA   Fichet-Calvet E., Strecker T., Ter Meulen J., Kruger D.H.;
RT   "Sangassou virus, the first hantavirus isolate from Africa, displays
RT   genetic and functional properties distinct from those of other
RT   murinae-associated hantaviruses";
RL   J. Virol. 86(7):3819-3827(2012).
XX
RN   [2]
RP   1-1746
RA   Klempa B., Witkowski P.T., Popugaeva E., Auste B., Koivogui L.,
RA   Fichet-Calvet E., Ter Meulen J., Kruger D.H.;
RT   ;
RL   Submitted (28-NOV-2011) to the INSDC.
RL   Institute of Virology, Helmut-Ruska-Haus, Charite Medical School,
RL   Chariteplatz 1, Berlin 10117, Germany
XX
DR   MD5; e52743fe9508bff495eca460cf30e67c.
DR   EuropePMC; PMC3302504; 22278233.
DR   EuropePMC; PMC4054438; 24741077.
DR   EuropePMC; PMC4851257; 26932442.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1746
FT                   /organism="Orthohantavirus sangassouense"
FT                   /segment="S"
FT                   /host="Hylomyscus simus"
FT                   /lab_host="Vero E6 cells"
FT                   /strain="SA14"
FT                   /mol_type="viral cRNA"
FT                   /country="Guinea"
FT                   /isolation_source="spleen"
FT                   /collection_date="2004"
FT                   /db_xref="taxon:3052496"
FT   gene            46..1335
FT                   /gene="S"
FT   CDS             46..1335
FT                   /codon_start=1
FT                   /gene="S"
FT                   /product="N protein"
FT                   /note="nucleocapsid protein"
FT                   /db_xref="GOA:H6WCQ8"
FT                   /db_xref="InterPro:IPR002214"
FT                   /db_xref="UniProtKB/TrEMBL:H6WCQ8"
FT                   /protein_id="AEZ02946.1"
FT                   /translation="MATLEEIQKEINIHEGQLIIAKQKVKDAEKQYEKDPDDLNKRALS
FT                   DREGIAHSIQSKIDELRRQLADRVAAGRNLGQERDPTGVEPGDHLREKSMLSYGNVIDL
FT                   NHLDIDEPTGQTADWLSIVIYLTSFVVPILLKALYMLTTRGRQTTKDNKGMRIRFKDDS
FT                   SFEDVNGIRKPKHLFLSMPNAQSSMKAEEITPGRFRTAVCGLYPAQIKARNMVSPVMSV
FT                   IGFITLARDWTERIENWLDQPCKFMSEPSQTSLQKGPATNRDYLNQRQASLAQMETKEA
FT                   QAVRQQAVDAGCNLVDHIDSPSSIWVFAGAPDRCPPTCLFISGMAELGAFFSILQDMRN
FT                   TIMASKTVGTSEEKLRKKSSFYQSYLRRTQSMGIQLDQRIIIMFMVEWGKEAVDGFHLG
FT                   DDMDPELRSFAQALIDQKVKEISNQEPLKI"
XX
SQ   Sequence 1746 BP; 565 A; 315 C; 375 G; 491 T; 0 other;
     tagtagtaga ctccctaaag agcactgcaa acaaagaagg aaaaaatggc aacactagag        60
     gagatccaaa aggaaatcaa catccatgag ggtcaactaa ttatagcaaa gcaaaaggtg       120
     aaggatgctg aaaaacagta tgagaaggat cctgatgacc ttaataagag ggcactcagt       180
     gatagagaag gaattgctca ttccatccag agcaaaatag atgagttgcg gagacaactt       240
     gctgataggg ttgcagcagg acggaacctg gggcaagaac gagatccaac cggtgttgaa       300
     ccaggagatc atctcagaga aaaatccatg ctcagttatg gaaatgttat cgacttgaac       360
     catctagata ttgatgaacc aactgggcag actgcagact ggctgagtat tgtgatttac       420
     ttgacttcat ttgtggtgcc aattttgttg aaggcacttt atatgcttac aacaagaggg       480
     aggcaaacta ctaaggataa caagggaatg aggattaggt ttaaggacga cagctctttt       540
     gaagatgtca atgggattag aaagcctaag catctgtttt tatcgatgcc aaatgcacaa       600
     tctagtatga aggctgaaga aattactcca ggaagattcc gcactgcagt ttgtggattg       660
     tatccagcac agataaaagc aagaaatatg gtcagcccag tgatgagtgt tattggcttt       720
     attactctag ccagagactg gactgaaaga attgaaaatt ggcttgacca accttgcaaa       780
     tttatgtctg aaccatctca gacttcattg cagaagggcc ctgcaacaaa tagagactat       840
     ctaaaccaaa ggcaggcctc ccttgcacaa atggaaacaa aagaagctca ggctgtcaga       900
     caacaagcag ttgatgctgg ttgtaattta gtggaccaca ttgactcacc atcatcaatt       960
     tgggtatttg caggagcacc tgatcgctgt ccaccaacct gcctgttcat atcaggtatg      1020
     gctgaactag gagctttctt ttcaatactg caggatatga gaaatacaat tatggcatca      1080
     aaaactgtcg ggacatctga ggaaaagctt aggaagaaat cgtcattcta ccagtcttac      1140
     cttagaagaa cgcaatctat gggaatacaa cttgatcaga ggataattat catgttcatg      1200
     gtggaatggg gtaaagaggc tgttgatgga tttcatcttg gtgatgatat ggatcctgaa      1260
     ctgcgatcat ttgctcaggc attgattgat cagaaagtga aagagatatc taatcaggaa      1320
     ccacttaaga tttagattat tattacctgc ttttgattat tccaatatcc atttgcacta      1380
     acttgtagaa tgtgaattat tgctactaat tagttatata attatctgat taggggatta      1440
     ttattcaatt gcactaattt ataggatgtg aattattact actaatcagg tgcacaatca      1500
     gtgggtttgg gtgggtcatt attccgttga attactcagg gtgggcttag gaccagtcac      1560
     cttaagtgac atttttgtat atattgatgt agatatcatt tggtaatcac taacatctat      1620
     cttttcccgt ttctgtttcc tttctttact aacaacaaca aactacctca catacatata      1680
     actacctcaa cacatactac ctcattgcgt tatttcctga atttcttttt agggagcata      1740
     ctacta                                                                 1746
//