ID   JQ073717; SV 1; linear; genomic RNA; STD; VRL; 1107 BP.
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AC   JQ073717;
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DT   05-DEC-2011 (Rel. 111, Created)
DT   05-DEC-2011 (Rel. 111, Last updated, Version 1)
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DE   Sweet potato virus C isolate UMBUM-C coat protein gene, partial cds.
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KW   .
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OS   Sweet potato virus C
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1107
RA   Sivparsad B.J., Gubba A.;
RT   "Molecular resolution of the genetic variability of most prevalent viruses
RT   infecting sweet potato (Ipomoea batatas Lam.) in KwaZulu-Natal (KZN)";
RL   Unpublished.
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RN   [2]
RP   1-1107
RA   Sivparsad B.J., Gubba A.;
RT   ;
RL   Submitted (11-NOV-2011) to the INSDC.
RL   Plant Pathology, University of KwaZulu-Natal (UKZN), Agric Avenue,
RL   Scotsville, Pietermaritzburg, KwaZulu-Natal 3209, South Africa
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DR   MD5; 3a6dca5dd7a7f6ef8bd2c89a7ec330d9.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1107
FT                   /organism="Sweet potato virus C"
FT                   /host="Ipomoea batatas Lam."
FT                   /lab_host="Ipomoea setosa Ker."
FT                   /strain="C"
FT                   /isolate="UMBUM-C"
FT                   /mol_type="genomic RNA"
FT                   /country="South Africa:Umbumbulu, KZN"
FT                   /collection_date="Jan-2008"
FT                   /db_xref="taxon:930881"
FT   CDS             <1..942
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:G9LQ43"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:G9LQ43"
FT                   /protein_id="AEU17211.1"
FT                   /translation="SGNPSEFKDAGANPPAPKPKGPYTAPEITEITEPEDPKQAALREA
FT                   RQKQPAVTPESYGRDTGEKPMRSVSPQRVKDKDVNVGTTGTFLVPRVKLHTSKMRQPRV
FT                   NGISVVNLQHLATYEPEQHNIGNTRSTQEQFQAWYEGVKGDYGVDDAGMAILLNGLMVW
FT                   CIENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRT
FT                   KAYMPRYGLQRNLTDMSLARYAFDFYELHSTTPTRAKEAHMQMKAAALKNAHNRLFGLD
FT                   GNVSTQEEDTERHTATDVTRNIHNLLGMRGVH"
XX
SQ   Sequence 1107 BP; 344 A; 224 C; 263 G; 276 T; 0 other;
     tctggcaacc cctctgaatt taaagatgca ggtgcgaacc caccagcacc aaagccaaaa        60
     gggccgtata cagcaccaga aatcacagaa attactgagc ccgaggatcc caaacaagct       120
     gcgcttcgcg aagctagaca gaaacaacct gctgtcacac ccgaatcata cggtagagat       180
     acaggtgaga aacctatgcg ctctgtttca ccacaaaggg taaaagacaa ggatgtcaat       240
     gttggtacga caggtacatt tttagtacca cgagttaagc ttcatactag taaaatgcgc       300
     caaccgagag tcaatggaat ctctgtagta aacttacaac accttgcaac ctacgaacct       360
     gagcaacata acattgggaa tacacgctca actcaggaac agtttcaagc atggtacgaa       420
     ggtgtcaagg gtgattacgg tgttgatgac gctggaatgg caatcttgtt gaatggattg       480
     atggtatggt gcatagagaa tggaacatct ccaaatataa atggcgtttg gacgatgatg       540
     gatggggatg aacaagtgac gtatcccata aagccattac tggatcatgc agtgcctact       600
     tttaggcaaa tcatgacaca cttcagtgac gttgctgaag cgtatataga aatgaggaat       660
     cgcaccaagg catatatgcc taggtatgga ttacaacgta atttgactga tatgagtctt       720
     gcgcgatatg catttgattt ctatgagctg cactcaacaa caccaacacg tgctaaagaa       780
     gcacacatgc agatgaaagc agctgcactt aagaatgcgc ataatcggtt gtttggtttg       840
     gatggaaacg tctccacgca agaagaggat acggagaggc acactgcgac tgatgttact       900
     agaaacatac ataacctctt aggaatgagg ggtgtgcact aggtgaaact ttgcactgta       960
     tttatttacg tatgtggttt ttagtatgcc tttatttaaa ttcgtgttct tcagtcccga      1020
     cagaaatggt tgggtgtatc gacagagtgg gcttttagcc tggtccatac acttgagaag      1080
     tttctggtct attacgtatc ataaggg                                          1107
//