ID   JQ073716; SV 1; linear; genomic RNA; STD; VRL; 1107 BP.
XX
AC   JQ073716;
XX
DT   05-DEC-2011 (Rel. 111, Created)
DT   05-DEC-2011 (Rel. 111, Last updated, Version 1)
XX
DE   Sweet potato virus C isolate UMP3-C coat protein gene, partial cds.
XX
KW   .
XX
OS   Sweet potato virus C
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1107
RA   Sivparsad B.J., Gubba A.;
RT   "Molecular resolution of the genetic variability of most prevalent viruses
RT   infecting sweet potato (Ipomoea batatas Lam.) in KwaZulu-Natal (KZN)";
RL   Unpublished.
XX
RN   [2]
RP   1-1107
RA   Sivparsad B.J., Gubba A.;
RT   ;
RL   Submitted (11-NOV-2011) to the INSDC.
RL   Plant Pathology, University of KwaZulu-Natal (UKZN), Agric Avenue,
RL   Scotsville, Pietermaritzburg, KwaZulu-Natal 3209, South Africa
XX
DR   MD5; 1092011e64fd83a19c73627c37a6ba2e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1107
FT                   /organism="Sweet potato virus C"
FT                   /host="Ipomoea batatas Lam."
FT                   /lab_host="Ipomoea setosa Ker."
FT                   /strain="C"
FT                   /isolate="UMP3-C"
FT                   /mol_type="genomic RNA"
FT                   /country="South Africa:Umphambanyomi River, KZN"
FT                   /collection_date="Jan-2008"
FT                   /db_xref="taxon:930881"
FT   CDS             <1..942
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:G9LQ42"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:G9LQ42"
FT                   /protein_id="AEU17210.1"
FT                   /translation="SGNPSEFKDAGANPPAPKPKGPYTAPEITEITEPEDPKQAALREA
FT                   RQKQPAVTPESYGRDTGEKPIRSVSPQRVKDKDVNVGTTGTFLVPRVKLHTSKMRQPRV
FT                   NGVSVVNLQHLATYEPEQHNIGNTRSTQEQFQAWYEGVKGDYGVDDAGMAILLNGLMVW
FT                   CIENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRT
FT                   KAYMPRYGLQRNLTDMSLARYAFDFYELHSTTPTRAKEAHMQMKAAALKNAHNRLFGLD
FT                   GNVSAQEEDTERHTATDVTRNIHNLLGMRGVH"
FT   3'UTR           943..>1107
XX
SQ   Sequence 1107 BP; 342 A; 220 C; 263 G; 282 T; 0 other;
     tctggcaacc cctctgaatt taaagatgca ggtgcgaacc caccagcacc aaagccaaaa        60
     gggccgtata cagcaccaga aatcacagaa attactgagc ccgaggatcc caaacaagct       120
     gcgcttcgcg aagctagaca gaaacaacct gctgtcacac ccgaatcata cggtagagat       180
     acaggtgaga aacctatacg ctctgtttca ccacaaaggg tgaaagacaa ggatgttaat       240
     gttggtacga caggtacatt tttagtacca cgagttaagc ttcatactag taaaatgcgc       300
     caaccgagag tcaatggagt ctctgtagtg aacttacaac accttgcaac ttacgaacct       360
     gagcaacata acattgggaa tacacgctca actcaggaac agtttcaagc atggtatgaa       420
     ggcgtcaaag gtgattatgg tgttgatgac gctggaatgg caatcttgtt gaatggatta       480
     atggtatggt gcatagagaa tggaacatct ccaaatataa atggcgtttg gacgatgatg       540
     gatggggatg agcaagtgac gtatcccata aagccattac tggatcatgc agtgcctact       600
     tttaggcaaa tcatgacaca cttcagtgac gttgctgaag cgtatataga aatgaggaat       660
     cgcaccaagg catatatgcc taggtatgga ttacaacgta atttgactga tatgagtctt       720
     gcgcgatatg catttgattt ctatgagctg cactcaacaa cacctacacg tgctaaagaa       780
     gcacacatgc agatgaaagc agctgcactt aagaatgcgc ataatcggtt gtttggtttg       840
     gatggaaacg tctccgcgca agaagaggat acggagaggc acactgcgac tgatgttact       900
     agaaatatac ataacctctt aggaatgagg ggtgtgcact aggtgaaact ttgcactgta       960
     tttatttact tatgtggttt ttagtatgcc tttatttaaa ttcgtgttct tcagtcccga      1020
     cagaaatggt tgggtgtatc gacagagtgg gcttttagcc tgatccatac acttgagaag      1080
     tttctggtct attacgtatc ataaggg                                          1107
//