ID JQ071376; SV 1; linear; genomic RNA; STD; VRL; 3749 BP. XX AC JQ071376; XX DT 14-APR-2013 (Rel. 116, Created) DT 14-APR-2013 (Rel. 116, Last updated, Version 1) XX DE Grapevine fanleaf virus isolate Bonab segment RNA2, complete sequence. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3749 RA Nourinejhad Zarghani S., Shams-Bakhsh M., Sokhandan Bashir N., Wetzel T.; RT "Molecular Characterization of Whole Genomic RNA2 From Iranian Isolates of RT Grapevine Fanleaf Virus"; RL J. Phytopathol. 0:0(2013). XX RN [2] RP 1-3749 RA Nourinejhad Zarghani S., Shams-Bakhsh M., Sokhandan Bashir N., Wetzel T.; RT ; RL Submitted (24-NOV-2011) to the INSDC. RL Plant Pathology, Tarbiat Modares University, Jalal Ale Ahmad Highway, RL Tehran P.O.Box: 14115-111, Iran XX DR MD5; 5037ed3e4755480727adfe966deca4ee. XX FH Key Location/Qualifiers FH FT source 1..3749 FT /organism="Grapevine fanleaf virus" FT /segment="RNA2" FT /host="grapevine" FT /isolate="Bonab" FT /mol_type="genomic RNA" FT /country="Iran" FT /isolation_source="leaf" FT /collection_date="May-2009" FT /db_xref="taxon:12274" FT CDS 200..3556 FT /codon_start=1 FT /product="P2 polyprotein" FT /db_xref="GOA:M9NH49" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR021081" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:M9NH49" FT /protein_id="AFI43913.1" FT /translation="MDKFYYSNRRLAVFAQAQSRHLGGSYEQWLACVSGDSAFRAEVKA FT RVQKDRSLERVVRMFSYPVGQGPIECPITPGGINWEFITTGTTPTSRVVLTEPVKAHEV FT VVVPQPKKAAIPSPPPPPKPYFRAVGAFAPTRSGFIRATVERLTREREESRAAALFAEL FT PLEYPQGAPLKLSMDMKFAALKHATWRKWYDTSDERLQNAHPGGPSLPPPLLQIQSTLP FT SFKERVRVFLERKSCSRAFSLETSLGLNKAWVSTIDIPSTSVCCADGRTAGGQTIAQEA FT DPLQHRVSSNVAPSRAEWISERRQALKRREQANSLQGLAAQTDMTFEQARNAYLGAADM FT IEQGLLLLPPLRSAYAPRGLWRGPSTRANYTLDFRLNGIPTGTNTLEILYNPVSEEEMD FT EYRDRGMSAVVIDALEIAINPFGVPGNPTDLTVVATYGHERDMTRAFIGSASTFLGNVL FT ARAIFFPGLQYSQEEPRHESIIRLYVASTNATVDTDSVLAAISVGTLRQHVGSMHYRTV FT ASTVHQAQVQGTTLRATMMGNTVVVSPEGSLVAGTPEACVEIGGGSSIRMVGPLQWESV FT EEPGQTFSIRSRSRSVRIDRNVDLPQLEAEPRLSSTVRGLAGRGVIYIPKDCQANRYLG FT TLNIRDMITDFKGVQYERWITAGLVMPIFKIVIRLPANAFTGLTWVMSFDAYNRITSRI FT TTSADPVYTLSVPHWLIHHKLGTFSCEVDYGELCGHAMWFKSTTFESPRLHFTCLTGNN FT KELAADWQAVVELYAELEEATSFLGKPTLVFDPGVFDGKFKFLTCPPIFFDLTAVTALR FT SAGLTLGQVPMVGTTKVYNLNSTLVSCVLGMGGTIKGKVHVCAPIFYSIVLWVVSEWNG FT TTMDWNELFKYPGVYVEADGSFEVKIRSPYHRTPARLLAGQSQRDMSSLNFYAIAGHIA FT PSGETARLPIVVQIEEIVRPDLSLPSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSS FT TCRVSMGENPFAAMIACHGLHSGILDLKFQWSLNTEFGKSSGSVTITRLVGDKALGLDG FT PSQVFALQRLEGTAELLIGNFAGANPNSHFSLYSRWMAIKLDQARSMKVLRVLCKPRPG FT FSFYGRTSFPV" XX SQ Sequence 3749 BP; 919 A; 780 C; 964 G; 1086 T; 0 other; atgaaaagtg gatcacactc caagagtttg ggaaactcaa aagtgatact gctaagagtt 60 taagaaactc aaaagcgaag agtttaagaa actcaacatt gcttttccat ctttttcctt 120 tgcgttttat ttgtttagca tttttttaag tttgtttgaa aagctttcat tttgttttct 180 ttatcttttc tttgccccta tggacaagtt ctattacagc aaccggcgcc ttgccgtgtt 240 tgctcaggct cagagccgcc atctgggtgg ctcatatgag caatggctcg cttgtgtaag 300 cggggactct gccttcaggg cagaggtcaa agctagggtt cagaaggacc gctcgcttga 360 gcgagtagtc cggatgttct cttaccctgt aggacaaggt cctatagagt gccccattac 420 tcccgggggt attaattggg agtttattac cacagggact actccaacgt cccgtgtggt 480 gctgaccgag ccggttaaag ctcatgaggt tgtggtggtg ccacagccga agaaggcggc 540 gattccgtcg ccacctcccc ctcccaagcc ctattttagg gctgtgggag cttttgcacc 600 aaccaggtcc gggtttattc gggccactgt ggaaagactt acccgggaac gggaagagtc 660 gagagctgcg gcactctttg ccgaacttcc attggagtat ccccaggggg ctcctctgaa 720 gttgagcatg gacatgaaat ttgctgcgct caagcatgcc acttggagga agtggtatga 780 cactagtgat gagcgtcttc agaacgctca tcctggtgga cccagtttgc ctcctcccct 840 cctccaaatc caaagcaccc ttccctcctt taaggagagg gttagggttt ttctagaaag 900 aaagtcatgc tctagggctt tttctctaga aacctcccta ggtcttaaca aggcctgggt 960 gagtactata gacatcccca gcacttctgt gtgttgtgcg gatggtcgaa ctgctggggg 1020 gcaaacgatt gcccaggaag ctgatccctt acagcatagg gtcagctcaa atgtagcccc 1080 cagtagggca gaatggatct cagagcgcag acaagctttg aagagaagag agcaggctaa 1140 tagcttgcag ggccttgctg ctcaaacgga tatgacattt gagcaggcca gaaacgccta 1200 tcttggtgct gcggacatga ttgaacaagg cttactgctg cttccccctc tacgcagcgc 1260 ttatgcccct aggggtttgt ggaggggacc ttcaaccaga gccaactaca cgctggattt 1320 taggctcaat ggtataccga ccgggacaaa cacattggaa atcttgtata atcccgtgtc 1380 tgaagaggaa atggacgagt accgggatag aggtatgtcg gctgtggtga ttgacgcgtt 1440 agaaatagcc atcaaccctt ttggcgtgcc tggaaatcca acggacttga ccgttgtagc 1500 gacatatggg catgagcgag atatgacgcg tgcctttatt ggttcggctt ccacattttt 1560 gggaaatgtg ttagcgagag ctatcttctt tcctggatta caatatagcc aggaggaacc 1620 aaggcacgaa tcaattattc gcctgtatgt cgcttctaca aacgccacag tggatactga 1680 ttcagttttg gcggccatta gtgttggtac tttacgccag catgttggtt ccatgcatta 1740 tcggacggtg gctagtactg tgcatcaggc ccaggtgcaa ggtacaactc ttagggctac 1800 catgatgggt aacactgttg tggtatcgcc agaaggaagt cttgttgctg gaactcccga 1860 ggcatgcgtt gaaatagggg gtggttctag catcagaatg gtgggacctt tacaatggga 1920 aagtgtggag gaaccggggc aaaccttctc tattagaagt cgctcacgat ctgtaaggat 1980 tgacagaaat gttgatcttc cgcagcttga ggccgagcct agattaagct cgaccgtgag 2040 aggattagct ggtagaggag ttatctacat tcccaaggat tgccaggcaa ataggtactt 2100 gggcaccctg aacatacgtg atatgattac agattttaag ggtgttcagt atgagaggtg 2160 gataactgcg ggtttagtca tgcccatttt taaaattgtc attaggctgc ctgcaaatgc 2220 cttcactgga ttgacatggg taatgagttt tgatgcttac aatcggataa ctagtaggat 2280 tactactagt gctgatcctg tatataccct gtctgtcccg cattggctca tccaccataa 2340 gttgggcacg ttttcatgtg aagttgacta tggagaactg tgtggacatg ctatgtggtt 2400 taaatctacc acatttgaat ctccaaggtt acatttcacc tgtttaacag gcaacaacaa 2460 agagttagcg gcagactggc aagctgtcgt agaactttat gctgagcttg aagaggccac 2520 gtcttttctt gggaaaccca cgttggtatt tgatccaggg gtttttgatg gcaaattcaa 2580 gtttttgacc tgccctccca ttttttttga tttgacggca gttacagctc tgaggagtgc 2640 tgggctaaca ttgggacaag ttccaatggt tggtaccact aaggtttaca atttgaatag 2700 cactcttgtg agttgtgttt tgggcatggg aggaactatt aagggaaagg tacacgtttg 2760 tgcaccgatc ttttatagta ttgtattgtg ggtcgttagt gaatggaacg ggaccactat 2820 ggactggaac gaattgttta aatatcccgg ggtgtatgtg gaagctgacg ggagtttcga 2880 agttaaaatc cgctctccat atcaccggac acctgctagg ttgcttgctg gacagagcca 2940 gagggacatg agttctctta acttctatgc aatagcagga catattgctc catcgggtga 3000 aactgcacga cttccaatcg ttgtacaaat agaagaaatt gtgcgccctg acttgtcctt 3060 accaagtttt gaagatgact attttgtatg ggtagatttt tctgaattta ctcttgacaa 3120 ggaggaaatt gagattggat ctcgtttctt cgatttcact tcaagcactt gtagggtgtc 3180 gatgggagaa aacccttttg ctgcgatgat tgcttgtcat ggattgcaca gtggtatatt 3240 agacctcaaa tttcaatgga gtctaaatac tgaatttggc aagagcagtg ggagcgttac 3300 tattacaagg ctggttggcg ataaagccct gggtctggac ggaccatcac aagtttttgc 3360 tctccaaagg ttagagggaa ctgcagagtt gttgataggg aattttgcag gtgcaaatcc 3420 gaattcacat ttctctctct atagccgatg gatggcaatt aaactggacc aagcaaggag 3480 tatgaaggta ctccgagttt tgtgtaaacc gcgtccaggc ttcagttttt atgggagaac 3540 cagctttcca gtctagggta tctgacttta aaagacccat ttatcatgta tattgtgtta 3600 ttgtttgttt aaactagtct cttttaccgc tttcgtgtgt ttaatttcat gcttttagtg 3660 gcgacagtgt gttgtttgtc ctttggacac acttgccttg ttggacgcaa aaagatttta 3720 attttctttt taatgttttg caaatttat 3749 //