ID JQ071375; SV 1; linear; genomic RNA; STD; VRL; 3730 BP. XX AC JQ071375; XX DT 14-APR-2013 (Rel. 116, Created) DT 14-APR-2013 (Rel. 116, Last updated, Version 1) XX DE Grapevine fanleaf virus isolate Urmia segment RNA2, complete sequence. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3730 RA Nourinejhad Zarghani S., Shams-Bakhsh M., Sokhandan Bashir N., Wetzel T.; RT "Molecular Characterization of Whole Genomic RNA2 From Iranian Isolates of RT Grapevine Fanleaf Virus"; RL J. Phytopathol. 0:0(2013). XX RN [2] RP 1-3730 RA Nourinejhad Zarghani S., Shams-Bakhsh M., Sokhandan Bashir N., Wetzel T.; RT ; RL Submitted (24-NOV-2011) to the INSDC. RL Plant Pathology, Tarbiat Modares University, Jalal Ale Ahmad Highway, RL Tehran P.O.Box: 14115-111, Iran XX DR MD5; 4d1013a8f216723dc30bea9b9d0216c3. XX FH Key Location/Qualifiers FH FT source 1..3730 FT /organism="Grapevine fanleaf virus" FT /segment="RNA2" FT /host="grapevine" FT /isolate="Urmia" FT /mol_type="genomic RNA" FT /country="Iran" FT /isolation_source="leaf" FT /collection_date="May-2009" FT /db_xref="taxon:12274" FT CDS 202..3537 FT /codon_start=1 FT /product="P2 polyprotein" FT /db_xref="GOA:M9NGF5" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR021081" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:M9NGF5" FT /protein_id="AFI43912.1" FT /translation="MGKFYYSNRRLACWAAGKNPHLGGSVEQWLAAINTDPSFRQTVKE FT DVQENRLEPTAIRMFSWKVGSGPIDNPEKPDWRYVLTGIPAGPSQPVKADEVVVVSQPK FT KKVIPPPPSPPAPYFRAVGAFAPTRSGFIRATVERLTREREESRAAALFAELPLEYPQG FT APLKMSLAMKFAMLKHATWRKWYDASDERLLNVHPGGPSLPPPHPQIQTTLPSFKERVR FT VFLERKSCSRTFSLETSLGLNRAWVGTIDLPSTSVCCADGRTTGGQTIAQEADPLQHRV FT SSSVAPGRAEWISERRQALRRREQANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPL FT LPPLRSAYAPRGLWRGPSTRANYTLDFRLNGIPTGTNTLEIMYNPVSEEEMDEYRDRGM FT SAVVIDALEIAINPFGMPGNPTDLTVVATYGHERDMTRAFIGSASTFLGNGLARAIFSP FT GLQYSQEEPRRESIIRLYVASTNATVDTDSVLAAISVGTLRQHVGSMHYRTVASTVHQA FT QVQGTTLRATMMGNTVVVSPEGSLVAGTPEARVEIGGGSSVRMVGPLQWESVEEPGHTF FT SIRSRSRSVRIDRNVDLPQLEAEPRLSSTVRGLAGRGVIYIPKDCQANRYLGTLNIRDM FT IIDFKGVQYEKWITAGLVMPIFKIVVRLPANAFTGLTWVMSFDAYNRITSRITASADPV FT YTLSVPHWLIHHKLGTFSCEVDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADW FT QAVVELYTELEEATSFLGKPTLVFDPGVFDGKFKFLTCPPIFFDLTAVTALKSAGLTLG FT QVPMVGTTKVYNLNSTLVSCVLGMGGTIKGKVHICAPIFYSIVLWVVSEWNGTTMDWNE FT LFKYPGVYVEADGSFEVKIRSPYHRTRARLLAGQNQRDMSSLNFYAIAGPIAPSGETAR FT LPIVVQIEEIVRPDLSLPSFEDDYFVWVDFSEFTHDKEEIEIGSRFFDFTSSTCRVSMG FT ENPFAAMIACHGLHSGILDLKFQWSLNTEFGKSSGSVTITRLVGDKALGLDGPSQVFAL FT QRLEGTAELLIGNFAGANPNTHFSLYSRWMAIKLDQAKSMKVLRVLCKPRPGFSFYGRT FT SFPV" XX SQ Sequence 3730 BP; 916 A; 795 C; 953 G; 1066 T; 0 other; atgaaaagtg gatcacactc caagagtttg ggaaactcaa aagtgatact tgccaagagt 60 ttaagaaact caccaagcga agagtttaag aaactcatca ttgctttttc cttctcttac 120 tttgcgcttt atttgtttag cattttattg agtttgttta aaaagctttt gttttgtttt 180 cctttttcgt gttttgcccc tatgggcaaa ttttactatt ccaacaggcg tctggcctgt 240 tgggcagctg gaaagaaccc ccatctgggg ggttctgttg agcaatggct ggcggccatt 300 aatactgatc cctccttccg ccaaactgtt aaggaggatg tccaagagaa caggctggaa 360 cctacagcca tcaggatgtt ctcctggaaa gtgggttcgg ggcccattga caaccccgaa 420 aaacctgact ggcggtatgt cctcacgggc atccctgccg ggccgtccca gccggttaaa 480 gctgatgagg ttgtggtggt gtcacaaccg aagaagaagg tgattccccc acctccttct 540 cccccagctc cctactttag ggctgttggg gcttttgcac caacccggtc cgggtttatt 600 cgggccactg tggaaagact tacccgggaa cgggaagagt cgagagctgc ggcactcttt 660 gccgaactgc cattggagta tcctcaagga gctcctttga agatgagcct ggcaatgaaa 720 tttgccatgc tcaagcatgc cacttggagg aagtggtatg acgctagtga tgagcgtctt 780 ttaaacgttc atcctggtgg acccagttta cctcctcccc accctcaaat ccaaaccacc 840 cttccctcct ttaaagagag ggttagagtt tttctagaaa ggaagtcctg ttctaggact 900 ttttctctag aaacctccct gggccttaat agggcctggg tgggtacaat agacctcccc 960 agcacgtctg tgtgctgtgc agatggtcgt accaccggtg ggcaaacaat tgcccaggaa 1020 gctgatccct tgcaacacag ggtcagctca agcgtagccc ccggtagggc tgaatggatc 1080 tcagagcgta gacaagctct gaggagaaga gagcaagcaa atagcttgca gggtcttgct 1140 gctcaaacag atatgacatt tgagcaggcc aggaatgctt atctcggtgc tgcagatatg 1200 attgagcaag gcctaccact gcttccccct ctacgcagtg cttatgcccc taggggctta 1260 tggaggggac cttctaccag agccaattac acgttggact tcaggctcaa tggtataccg 1320 accgggacaa atacgttgga aatcatgtat aatcccgtgt ctgaagaaga aatggacgag 1380 taccgggata gaggtatgtc ggctgtggtg attgatgcgt tagaaatagc catcaaccct 1440 tttggcatgc ctggaaatcc aacggacttg actgttgtag cgacgtatgg gcatgagcga 1500 gatatgacgc gtgcctttat tggttctgct tccacgtttt tgggaaatgg gctagcgaga 1560 gctatttttt cccctggatt acaatatagc caggaggaac caaggcgcga atcaattatt 1620 cgcctgtatg ttgcttccac aaacgccaca gtggatactg attcagtttt ggcggccatc 1680 agtgttggta ctttacgcca gcatgttggt tccatgcatt atcgaacggt ggctagtact 1740 gtgcatcaag cccaggtgca aggtacgact cttagggcta ccatgatggg taacactgtt 1800 gtggtatcgc ctgaaggaag tcttgttgct ggaactcccg aggcacgtgt cgaaataggg 1860 ggtggctcta gcgtcaggat ggtgggacct ttacaatggg aaagtgtgga ggaaccgggg 1920 cataccttct ctattagaag tcgctcacgc tctgtgagga ttgacagaaa tgttgatctt 1980 cctcagcttg aggccgagcc tagattaagc tcgaccgtga gaggattggc tggtagagga 2040 gttatctata ttcccaagga ttgccaggca aacaggtact tgggcaccct aaatatacgc 2100 gacatgatta tagattttaa gggtgttcag tatgagaagt ggataactgc aggtttagtc 2160 atgcccattt ttaaaatcgt tgtcaggcta cctgcaaatg cctttactgg gttgacatgg 2220 gtaatgagtt ttgatgctta caaccggata actagtagga ttactgctag cgctgatcct 2280 gtgtataccc tatctgtccc gcattggctt attcaccaca agttgggcac gttttcatgt 2340 gaagtcgact acggagaatt gtgtggacat gctatgtggt ttaaatctac cacatttgaa 2400 tctccgaggt tgcatttcac ctgtttaacg ggcaacaaca aagagttagc ggcagactgg 2460 caagctgtcg tggaacttta taccgagctt gaagaggcca cgtcttttct tgggaaaccc 2520 acgttggtat ttgatccagg ggttttcgat ggcaaattca agtttttaac ttgccctccc 2580 attttctttg atttaacggc cgtcacagct ctgaagagtg ctgggctaac attgggacaa 2640 gtcccaatgg ttggtaccac aaaggtttat aacttaaata gcactcttgt gagttgtgtt 2700 ttgggaatgg ggggtactat taaggggaag gtacacatat gtgcaccgat cttttatagt 2760 attgtgttgt gggtagttag tgagtggaac gggaccacta tggactggaa tgaattgttc 2820 aaatatcccg gggtgtatgt ggaagctgat gggagctttg aagttaaaat ccgctctcca 2880 tatcaccgaa cacgtgctag attgctagct ggacagaatc agagggatat gagttctctc 2940 aatttttatg caatagcagg acccatagct ccgtcggggg aaaccgcacg acttccaatc 3000 gttgtacaaa tagaagaaat tgtgcgccct gatttatcct tgccaagttt tgaagatgat 3060 tattttgtat gggtggattt ttctgaattt actcatgaca aggaggaaat tgagattgga 3120 tctcgtttct tcgacttcac ttcaagcact tgcagggtat cgatgggaga aaatcccttt 3180 gctgcgatga tcgcttgtca tggattgcac agtggtatat tggacctcaa atttcaatgg 3240 agtctaaata ctgaatttgg caagagcagc gggagcgtca ctattacaag gttagttggt 3300 gacaaagccc tgggcttgga cgggccatca caggtttttg ctctccagag gttagaggga 3360 actgcagagt tgttgattgg gaattttgca ggtgcaaatc cgaacacaca tttctctctc 3420 tacagccgat ggatggcaat taaactggat caagcaaaga gtatgaaggt actccgagtt 3480 ctgtgtaaac cacgtccagg cttcagtttt tatggtagaa ccagctttcc agtctagggt 3540 atctgacttt aaaagaccca tctatcatgt atattgtgtt attgtttgtt ttaactagtc 3600 tcttttaccg cttttgtgtg tttaatttca tgcttttagt ggcgacagtg tgttgtttgt 3660 cctttggaca cacttgcctt gttggacgca aaaagatttt aattttcttt ttaatgtttt 3720 gcaaatttat 3730 //