ID   JQ070395; SV 1; linear; genomic RNA; STD; VRL; 851 BP.
XX
AC   JQ070395;
XX
DT   15-APR-2012 (Rel. 112, Created)
DT   15-APR-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Pata virus isolate CAF1968/01 segment 10, complete sequence.
XX
KW   .
XX
OS   Pata virus
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-851
RX   PUBMED; 22438872.
RA   Belaganahalli M.N., Maan S., Maan N.S., Nomikou K., Pritchard I., Lunt R.,
RA   Kirkland P.D., Attoui H., Brownlie J., Mertens P.P.;
RT   "Full Genome Sequencing and Genetic Characterization of Eubenangee Viruses
RT   Identify Pata Virus as a Distinct Species within the Genus Orbivirus";
RL   PLoS One 7(3):E31911-E31911(2012).
XX
RN   [2]
RP   1-851
RA   Belaganahalli M.N., Maan S., Maan N.S., Nomikou K., Mertens P.P.C.;
RT   ;
RL   Submitted (22-NOV-2011) to the INSDC.
RL   Vector-borne Viral Diseases Programme, Institute for Animal Health,
RL   Pirbright laboratory, Ash Road Pirbright, Woking, Surrey GU24 0NF, United
RL   Kingdom
XX
DR   MD5; f7498fa0cbb73dec648a98d8337518f5.
DR   EuropePMC; PMC3305294; 22438872.
DR   EuropePMC; PMC3387800.
DR   EuropePMC; PMC5488374; 28595631.
XX
CC   GenBank Accession Numbers JQ070386-JQ070395 represent the complete
CC   genome of Pata virus isolate CAF1968/01.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..851
FT                   /organism="Pata virus"
FT                   /segment="10"
FT                   /host="Aedes palpalis"
FT                   /isolate="CAF1968/01"
FT                   /mol_type="genomic RNA"
FT                   /country="Central African Republic"
FT                   /collected_by="J.P. Digoutte and F.X. Pajot"
FT                   /collection_date="1968"
FT                   /db_xref="taxon:1170506"
FT   CDS             21..734
FT                   /codon_start=1
FT                   /product="NS3"
FT                   /db_xref="GOA:H9ZXT1"
FT                   /db_xref="InterPro:IPR002565"
FT                   /db_xref="UniProtKB/TrEMBL:H9ZXT1"
FT                   /protein_id="AFH41528.1"
FT                   /translation="MLSRLIAKYEEEKTEIYEMNKTQNETLELVRYDESAARPPSYAPT
FT                   APVQIPGMPSVSLDILDKAMSNTTGTTNAQKEEKAAYASYAEAFRDNLRVRQVKRRVNE
FT                   QILPRLKTELRGLKTRKTIIHITLLVAATAALLTSVSTLTGDLSITIPAIGQANSTKIE
FT                   MPAWFKGFSTVFGIINLASTTVMLISARQERALDAHIAMLRKEIMKKTSYNEAVHMSMT
FT                   ELSEVPLDGFEIPMT"
XX
SQ   Sequence 851 BP; 287 A; 162 C; 206 G; 196 T; 0 other;
     gtaaaaagaa cctggttgcc atgctatcgc gactcattgc aaagtacgag gaagaaaaaa        60
     ctgaaatata tgagatgaat aaaacgcaga acgaaactct agaattggta cgctacgacg       120
     aaagtgccgc tcgtccacca agttatgctc caactgcacc cgttcaaata ccaggcatgc       180
     cgagtgtttc attggatata ttggacaaag cgatgtctaa tacaacgggt acaaccaacg       240
     cgcaaaaaga agagaaggcg gcgtatgcat cttatgcaga ggcgtttaga gataatttac       300
     gagtaagaca agtcaagcga cgcgtaaatg aacaaatatt acctcgatta aaaactgagt       360
     tacgaggttt aaagacaaga aagacaataa tacatatcac attgctagta gctgcgaccg       420
     ccgccttgtt aacatcagta agtacattga cgggcgattt aagtattacg attccagcga       480
     ttggtcaagc aaatagcaca aaaattgaga tgcctgcttg gtttaaaggg ttttctactg       540
     tatttggaat aattaaccta gcgtcgacga cagttatgtt gataagtgcg aggcaggaaa       600
     gagcgttaga tgcgcacatt gcaatgttac gcaaggagat aatgaagaaa acatcgtata       660
     atgaagcggt ccatatgagc atgacggagc tgtcagaagt accactagat ggtttcgaaa       720
     taccaatgac ttagcgatga gaggatagac tgggacccca aggcttattg tggatgggtg       780
     gcagtccatc catgagaggc attcaccgct gtataacggg aatgggattt caccaggttc       840
     gcgcaactta c                                                            851
//