Dbfetch
ID JQ070378; SV 1; linear; genomic RNA; STD; VRL; 2773 BP. XX AC JQ070378; XX DT 15-APR-2012 (Rel. 112, Created) DT 15-APR-2012 (Rel. 112, Last updated, Version 1) XX DE Eubenangee virus isolate AUS1963/01 segment 3, complete sequence. XX KW . XX OS Eubenangee virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus. XX RN [1] RC Publication Status: Online-Only RP 1-2773 RX PUBMED; 22438872. RA Belaganahalli M.N., Maan S., Maan N.S., Nomikou K., Pritchard I., Lunt R., RA Kirkland P.D., Attoui H., Brownlie J., Mertens P.P.; RT "Full Genome Sequencing and Genetic Characterization of Eubenangee Viruses RT Identify Pata Virus as a Distinct Species within the Genus Orbivirus"; RL PLoS One 7(3):E31911-E31911(2012). XX RN [2] RP 1-2773 RA Belaganahalli M.N., Maan S., Maan N.S., Nomikou K., Mertens P.P.C.; RT ; RL Submitted (22-NOV-2011) to the INSDC. RL Vector-borne Viral Diseases Programme, Institute for Animal Health, RL Pirbright laboratory, Ash Road Pirbright, Woking, Surrey GU24 0NF, United RL Kingdom XX DR MD5; c10a88db3c51f0d66616edef5314e7bb. XX CC GenBank Accession Numbers JQ070376-JQ070385 represent the complete CC genome of Eubenangee virus isolate AUS1963/01. XX FH Key Location/Qualifiers FH FT source 1..2773 FT /organism="Eubenangee virus" FT /segment="3" FT /host="mosquitoes (from mix of 11 species)" FT /isolate="AUS1963/01" FT /mol_type="genomic RNA" FT /country="Australia" FT /collected_by="Doherty and colleagues" FT /collection_date="1963" FT /note="infects marsupials and cattle" FT /db_xref="taxon:40056" FT CDS 20..2722 FT /codon_start=1 FT /product="VP3" FT /note="inner core protein; T2" FT /db_xref="GOA:H9ZXR4" FT /db_xref="InterPro:IPR002614" FT /db_xref="InterPro:IPR016029" FT /db_xref="UniProtKB/TrEMBL:H9ZXR4" FT /protein_id="AFH41511.1" FT /translation="MAQAVQDSKVPKTAPYLDGDVVANDSGPLLSLFALQEIMQKVREN FT QAEYLAAARETDLAAPDVQAIITGIKSLADETHYEIRSEPVTSFRHIVMQSHEHFLRIN FT TYYERMSEIGKSIDEEDPQQTYETILEKVRAIRKEGSFILHGIKTRDLRGVEIADSSIL FT GVDISNVLPMLTAEYRLMVQNVLDGVIVENGNVADRDVDVFMGAMSDPIYRIYNALQGY FT IEGIQRYQLHMSMEWLERLGRRKRIIFSQEFLTDFRRADTIWILALQLPVNPTVIWTVP FT RCDIANLIMNIATCSPTGDYISPNPRITSITLTQRITQTGPFSILAGATPTALQMNDVR FT KIYLALMFPGQIVLDIKNDPAQRSDPTVRMVAGVVGHLMFTFGRNFTNLTLNMARQLDM FT ALADFLQYMYNARIPINRGASGEPLDFRIGRAQYDCNQFRGNPQTGQGYNGWGIADVEI FT REPSPYDHAQRFIRYCDIDSREIIQPTTFGINMQYYAYEEMLRMLVAAGKEQEAAYFRA FT MLPFHMVRFARINQIINEDLISAFTLPDDAFNTLLPNMIQGIQGRHTPIVLEVSWMSIW FT FSFNRAFDPTNRSELLTLTPLIESIYASELSVMKTDMRAMATLRTRFPDTLIGARPSHF FT WKAVLNVSPEPVKNLMNMAHAFDYVNLKDIMEWVNEPSMQPSMKLTLEREAWVVANDFE FT DLMLVDQVFMQRTILPEPRLDDIRLFRRDGFFFTNMLEGPPRINDVIQYTYEVARLQAN FT MGQFRAALRRILDDDGWIRFGGALRSVKIKFFDARPPESILQEVPFSYETSEKGGLFYA FT TIKYATEATVYYLIYNVEYSNTPDSLILINPTYTMTKVYMTKRIVERVHAGQLLSVLNK FT RFVAYKGKMRLMDITTALKAGTRLAVPTQ" XX SQ Sequence 2773 BP; 820 A; 519 C; 695 G; 739 T; 0 other; gtataattcc gtggcgagta tggctcaagc agtgcaagat agtaaagtgc caaagacagc 60 gccatatttg gatggagatg ttgtcgcgaa tgactcagga ccgttgctgt cgctgttcgc 120 attacaggag attatgcaaa aggtgcgtga aaatcaagca gagtatttgg ctgcagcgag 180 agagacggat ctggcggcac cggatgtaca agcaatcata accggaatca agtcgttagc 240 tgatgagact cactatgaga tcaggtcaga accggtaaca tcgtttagac atatagtgat 300 gcaatcgcat gagcattttt tgcgaatcaa cacgtattat gaacggatgt cggagatcgg 360 gaaatcaatt gatgaagagg atccgcaaca aacgtacgaa acgattttgg agaaggtacg 420 agcgatcagg aaagagggat cattcatctt acacggcatt aaaacacgtg atttgcgagg 480 tgtggaaata gccgattcca gcattttggg ggttgatatc tcaaatgtac taccgatgct 540 gactgctgaa tatcgcttaa tggtacagaa tgtgttggat ggtgtaatcg ttgaaaacgg 600 aaatgttgcc gatcgtgacg ttgacgtatt tatgggggca atgtcagatc ccatctatag 660 gatttacaat gctctgcagg gctatattga gggcatacag agataccaat tacatatgtc 720 aatggagtgg ttagaacgat tgggtagacg taaaaggata atcttttctc aagagttttt 780 gactgatttt agacgtgctg atacaatttg gattttggct ttacaattac cagtgaaccc 840 aaccgtcatt tggacggttc caagatgtga tattgctaat cttataatga acatagctac 900 gtgtagccca acaggtgatt atatttctcc gaatccaaga atcacaagca taacgttgac 960 acaacgaata acacagacag gtccattctc aatactggct ggagcaacac caacagcgtt 1020 acaaatgaat gatgtacgaa agatatatct ggctctgatg ttccctggtc aaattgtatt 1080 ggatataaaa aacgacccag cacaaagatc ggacccgaca gttcgaatgg tggcaggcgt 1140 tgttgggcat ttgatgttta cgtttggacg aaatttcacc aatttgactc tgaatatggc 1200 gaggcagttg gatatggctt tggctgattt tttacaatat atgtacaacg ccagaattcc 1260 aataaatcga ggtgcttcgg gtgaaccact tgattttaga ataggtcgag cgcaatatga 1320 ttgcaaccaa tttcgtggta acccacaaac tgggcaggga tataacgggt ggggaatagc 1380 tgacgttgaa attagagaac cgagcccgta cgatcatgca cagcggttta tacgatattg 1440 tgatatagat tcaagagaga tcatacaacc tacgaccttc gggattaata tgcagtatta 1500 cgcctatgag gaaatgctga ggatgctggt ggctgcggga aaagaacagg aggcggctta 1560 ctttcgcgca atgttaccgt ttcacatggt gaggtttgcg agaataaatc aaattataaa 1620 tgaagatcta atttcggcgt tcactttgcc agatgatgct ttcaatactt tattacccaa 1680 tatgattcaa ggtatacagg gcagacatac gccaatcgtt ctggaagtaa gctggatgtc 1740 gatctggttt tcatttaatc gcgcattcga cccaacgaat agatcggaat tgttgacgct 1800 aacccctttg atagagtcaa tatacgcgtc tgagttatca gtgatgaaga cggatatgag 1860 agcgatggcg acgttacgaa ctcgattccc agatacacta attggtgcac gcccctctca 1920 tttttggaaa gcagtactga atgtatctcc cgaaccggtg aagaacttga tgaatatggc 1980 gcatgcgttt gattatgtca acttgaaaga tattatggaa tgggtgaatg aaccatcgat 2040 gcaaccttcg atgaagttga cattagaacg tgaggcgtgg gttgtggcga acgatttcga 2100 ggatttgatg ttggtagatc aagtgttcat gcaaaggacc atcctacctg aacctaggtt 2160 ggatgacatc cgattgttta ggcgggatgg tttctttttc acgaacatgt tggaagggcc 2220 tcctcgtatc aacgatgtga ttcagtatac atacgaggtt gctaggctgc aagcaaatat 2280 ggggcagttt cgtgcagcgt tgcgtagaat tttggatgat gacggttgga ttaggtttgg 2340 aggggcatta cgctccgtca aaatcaagtt ctttgatgca agaccaccag agtcaatatt 2400 acaagaagtt ccattttcgt atgaaacaag tgaaaaaggt ggattgttct acgcaaccat 2460 caaatacgct acggaagcga ccgtatacta tttgatttat aacgtcgaat actctaatac 2520 gccggactct ttgatcctaa ttaatccaac atacacgatg acgaaggtat atatgacgaa 2580 gcgaatagtg gagagagtgc atgcagggca gttgctttcg gttcttaaca aacgattcgt 2640 tgcatacaaa gggaagatgc ggttgatgga tattaccacc gcgctgaaag ccggcactcg 2700 ccttgcggtt ccaactcaat aacgtgtacg cgaccgcatg tgatgggcga caaccgcaac 2760 gggacacact tac 2773 //