ID JQ070376; SV 1; linear; genomic RNA; STD; VRL; 3962 BP. XX AC JQ070376; XX DT 15-APR-2012 (Rel. 112, Created) DT 15-APR-2012 (Rel. 112, Last updated, Version 1) XX DE Eubenangee virus isolate AUS1963/01 segment 1, complete sequence. XX KW . XX OS Eubenangee virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus. XX RN [1] RC Publication Status: Online-Only RP 1-3962 RX PUBMED; 22438872. RA Belaganahalli M.N., Maan S., Maan N.S., Nomikou K., Pritchard I., Lunt R., RA Kirkland P.D., Attoui H., Brownlie J., Mertens P.P.; RT "Full Genome Sequencing and Genetic Characterization of Eubenangee Viruses RT Identify Pata Virus as a Distinct Species within the Genus Orbivirus"; RL PLoS One 7(3):E31911-E31911(2012). XX RN [2] RP 1-3962 RA Belaganahalli M.N., Maan S., Maan N.S., Nomikou K., Mertens P.P.C.; RT ; RL Submitted (22-NOV-2011) to the INSDC. RL Vector-borne Viral Diseases Programme, Institute for Animal Health, RL Pirbright laboratory, Ash Road Pirbright, Woking, Surrey GU24 0NF, United RL Kingdom XX DR MD5; 02564aac5503155bcdb351fe737549d2. DR EuropePMC; PMC3305294; 22438872. DR EuropePMC; PMC3387800. XX CC GenBank Accession Numbers JQ070376-JQ070385 represent the complete CC genome of Eubenangee virus isolate AUS1963/01. XX FH Key Location/Qualifiers FH FT source 1..3962 FT /organism="Eubenangee virus" FT /segment="1" FT /host="mosquitoes (from mix of 11 species)" FT /isolate="AUS1963/01" FT /mol_type="genomic RNA" FT /country="Australia" FT /collected_by="Doherty and colleagues" FT /collection_date="1963" FT /note="infects marsupials and cattle" FT /db_xref="taxon:40056" FT CDS 13..3936 FT /codon_start=1 FT /product="VP1" FT /note="RNA-dependent RNA polymerase; Pol" FT /db_xref="GOA:H9ZXR2" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR008723" FT /db_xref="UniProtKB/TrEMBL:H9ZXR2" FT /protein_id="AFH41509.1" FT /translation="MVATVRGVEIVDRVLKRFYPTAEFDYTRGFWHLYRFSTNIRAIRR FT KKGTKYQRDDEVLANLVDRRTETLYGIRVLNEASWNELTEEYNKRSRGLKIFENSVLDH FT EELDPEEEFLRNYKVVEDGAGHLSTFIETRAKIEMQIYGDLPMKIWFIFVEQLCRHIGF FT ETEGLAVMKSFLSKYGTPFHQGLRDLSKLDGFRMSYSTPMLFEMSCMESLLEINIFKRM FT QEEKIRCLQFGNRNIDPIALLREFYLICLPHPKRINNILRSPYSWFVKTWGVAADPIVV FT LKSSGGDDRNSKDVYYEKFQYVENSYVPIFDARFYQKSLEDNVEKVNEAIEYSRELGQH FT DEGLPIFMSMLKDVYRTPFVPNKPSNLILASFMLSIQTITGYGRAWVKNVGTDFGKQKR FT PSKDNFIERVSDYTANNFIAAYEEARQHHEDIVFPEDLYTSMLRLARNTSSGFSTSVKV FT RKAFGPNVKRKPELIDVTSRIKALVIFTKGHTVFTPEELNKRYNTTTNYQTKGSREVPI FT KATRTIYSINLSVLVPQLVVTLPLNEYFARVGGSTSPYCKKMGGKIIVGDLEATGSRVM FT DAADTFRNSADPGTFTLAIDYSEYDTHLTRHNFRGGMIKGLRAAMAKYRNLRYEGYSLD FT ELIDFGYGDGRVAMTLWNGKRRVFKVPAHLYIMLNEDDRKQGDFKPPPGVRPVTSMAVA FT KKLIQEKSITDDYILVSPTDGSDLALIDTHLSGENSTLIANSMHNMAIGTIIQEEVLRK FT YPTEIAFQSEQYVGDDTLLYTQLLTRDPKVVNGIIETTFTSVEKCGHEASASKTMVYPY FT SVEKTQTHAKQGVYVPQDRMMIISSERRKDIENVNGYMRSQVHTMVTKVSRGFSHDLAQ FT WILMLKTVFVGAWKLKRTIKDVHGYRDRKFDDDAEDGFTLVTLKNPLALHIPQSWGGYG FT AHPAALNIVMTEEMFIDSMQMSRLEVEMQMLTKVAGKLPPAWDETQADKRQISAETKMS FT FFSKMARPAVRATLMVPEIMDVVETLPLGDFGPGRLSKTMMHSALLKEANARSLLVSSY FT ELEYQKQLNGWRELPMSFTLDEESGYVSSKYAKMFDIYFDEEIIEPAHVFPDQNLSPQF FT YVQKAIIGQRKSTRMRMSYIDRIDSILRKDVVMRGFLTANTIVNVLEKVGISHTAVDLV FT TLFTLMNIEVKVAEELAEYITSERVRFDAVKLLKKGIVGDEFSMSLDVATQDMIDQLIR FT YPHELTKTELDAVSLYVSQLIMLRAALGMKKRRIRISISSDERERFRAKIQRYKTHTPK FT LKLIKKLIDINRLSVRALENQFV" XX SQ Sequence 3962 BP; 1273 A; 672 C; 983 G; 1034 T; 0 other; gtataattcg cgatggtcgc aactgtgcgt ggcgtggaaa tagttgatcg agtactcaag 60 aggttctacc ctacagccga gtttgattac acgcgaggat tctggcatct atacaggttt 120 tcaacgaaca taagagcaat acgtagaaag aaaggcacga aatatcaaag agatgatgag 180 gtgttagcga atttggttga caggaggacg gaaactctat atgggatacg tgttttgaat 240 gaagcgagtt ggaatgaact cactgaagaa tataacaagc ggtcgcgagg gcttaagatt 300 tttgaaaact cagtattaga ccatgaagaa ttagatccgg aggaagaatt tttgcgaaat 360 tataaagtgg tggaggatgg cgccggacat ttatcgacgt tcattgagac gcgagcgaaa 420 attgaaatgc aaatatatgg tgatttaccg atgaaaatat ggtttatctt cgtagaacag 480 ttatgcagac acattgggtt cgaaacagaa ggcttggcgg taatgaaatc ttttttatcg 540 aagtatggaa caccgtttca ccaaggctta agagacttgt caaaattaga cggatttaga 600 atgtcgtatt caacaccgat gttgtttgag atgagctgca tggaatcgct attggaaata 660 aatatattca aaagaatgca ggaggaaaag atacgttgtt tacagtttgg aaatagaaat 720 atagatccaa tagcattgtt aagggaattt tatttgatat gtttaccaca tccaaaacgt 780 attaataata tcctacgatc accctactcg tggttcgtca aaacatgggg tgtagcggca 840 gatcctattg tagtgttgaa atcatctgga ggcgacgatc gaaatagcaa ggacgtatat 900 tatgaaaaat ttcaatatgt tgagaattct tatgtaccta tatttgatgc tcgcttttat 960 cagaagagct tggaggataa cgtcgaaaaa gtgaatgaag ctatcgagta ttcgcgtgag 1020 ttagggcagc atgatgaggg attgccgatt tttatgagca tgttgaagga cgtatatcga 1080 acaccattcg ttcccaataa gccttcaaac cttatactcg catcattcat gcttagtatt 1140 cagactatta caggctacgg acgggcatgg gttaaaaatg tcggtacgga ctttggtaag 1200 cagaaaagac cttcaaagga taactttatc gaacgtgttt cagattatac agcaaataat 1260 tttatagcgg cgtatgagga agccaggcag catcatgaag acattgtatt ccctgaagat 1320 ctatacacat ctatgctgag gttagctaga aatacaagct cagggttttc aacatcagtg 1380 aaggttagaa aagcgtttgg cccaaacgtg aaaagaaagc cggagttgat tgatgtaact 1440 tcgaggatca aagcgctcgt aatcttcacg aaagggcata cagtgtttac tccagaagaa 1500 ttaaacaaaa gatataatac tacgaccaac tatcagacga aaggatcaag agaggttccg 1560 ataaaagcga cgaggacgat ttattcaata aatttatcag tgttagtgcc gcaattagtt 1620 gtaacattac cattgaatga atattttgcc agagttggag gttccacttc accctactgc 1680 aaaaagatgg gaggtaaaat cattgtaggt gatttggaag ctacagggtc gagggtgatg 1740 gatgccgcag atacgtttag gaattccgct gatccaggca cgtttacttt agcaatagat 1800 tatagtgaat atgatacaca cttgacgagg cataattttc gaggaggtat gattaaggga 1860 ttacgtgccg cgatggcaaa atatagaaat ttgcgatatg aaggttactc tttggacgag 1920 ctaattgatt tcggatatgg agacggaagg gtggcgatga cgctttggaa cggtaaaaga 1980 cgtgtcttta aggttccagc gcatctgtat ataatgttaa acgaggacga tagaaaacag 2040 ggcgatttca agccaccacc tggagtacgt cccgtcacct cgatggctgt ggctaaaaaa 2100 ttgatacaag agaaatccat aactgatgat tatattctgg tttcaccaac ggatggaagt 2160 gacttggcgc ttatcgatac acatctatca ggtgagaact cgacattgat agcaaattca 2220 atgcataaca tggcgattgg gacgataata caagaagaag tactgagaaa gtacccaacg 2280 gaaattgctt ttcaatccga acaatatgtt ggagatgaca cattactata tacacaactg 2340 ctgactcgag acccaaaggt ggtgaatgga ataattgaga ctaccttcac gtcagtggag 2400 aaatgcggtc atgaagcatc agcatcgaag acaatggtat acccttattc tgttgagaag 2460 acgcagacac atgctaagca aggagtttat gtaccacagg accggatgat gatcatttct 2520 tcagagcgga ggaaggatat cgagaatgtg aacggttaca tgcggtcaca ggtacataca 2580 atggtgacaa aagttagcag ggggttttcg catgatttag cccaatggat actgatgctg 2640 aaaacagttt ttgtgggagc ttggaagctg aagagaacaa ttaaggatgt tcacgggtat 2700 cgcgacagaa agtttgatga cgacgcagag gatgggttta cgctcgtgac gttaaaaaac 2760 ccattggcct tgcatatacc gcaaagttgg ggagggtatg gtgcacatcc tgcagcgctt 2820 aatattgtga tgacagaaga aatgttcatt gattcgatgc aaatgtcaag gctcgaagta 2880 gaaatgcaaa tgctcacaaa ggtagcgggt aaattaccgc cagcatggga tgaaactcag 2940 gctgataaac gacaaatatc tgcagagacg aagatgagct tcttcagtaa gatggctcga 3000 ccagcggtac gcgctacgct gatggttccg gagattatgg atgtcgttga aaccttgcca 3060 ttaggagatt ttggacctgg acgcttgtcg aagacaatga tgcattcagc tctccttaag 3120 gaagcaaatg cgcgcagttt acttgtgagc agctatgagc tagaatacca gaagcagttg 3180 aacgggtgga gggagctgcc tatgagcttt acgttagatg aggagagcgg gtacgtctct 3240 agtaaatatg cgaaaatgtt tgatatttat tttgatgaag agataatcga accagcacac 3300 gtgtttccgg atcaaaatct ctctccgcaa ttctacgtac aaaaggcgat aattggacaa 3360 cgcaaatcaa ctcggatgcg catgtcatat attgaccgaa tcgactcaat actgcgaaaa 3420 gacgttgtta tgcgaggttt tttgacagct aataccatag tgaatgttct tgagaaagtc 3480 ggtataagcc atacggcggt tgatttggtc acattattta ccttgatgaa catcgaagta 3540 aaggttgcgg aggagttggc cgaatatata acatcagaaa gggtcagatt tgacgcggtt 3600 aagctactaa agaaggggat cgttggggac gaattttcga tgtcgttaga tgtggctact 3660 caggatatga tcgaccaact aattcgctac ccgcatgagc tgacgaagac agaattagac 3720 gcggttagtt tatacgtttc acaattgatc atgctacggg ccgcgttagg aatgaagaag 3780 agaaggatac gaattagtat ctcctctgat gagcgtgaac gatttagagc aaagattcaa 3840 cgttataaaa cacatacacc caagttgaag ttgattaaaa aactgattga tataaatagg 3900 ctgtcggtga gagcgcttga aaatcagttc gtttaacttg acacgccagc gaataaactt 3960 ac 3962 //