ID JQ045706; SV 1; circular; genomic DNA; STD; VRL; 2559 BP. XX AC JQ045706; XX DT 23-DEC-2012 (Rel. 115, Created) DT 23-DEC-2012 (Rel. 115, Last updated, Version 1) XX DE Potato yellow mosaic virus isolate Tulua/Valle del Cauca/2008 segment B, DE complete sequence. XX KW . XX OS Potato yellow mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2559 RA Lopez-Lopez K., Betancurt-Perez J.F., Vaca-Vaca J.C.; RT "Distribution and genetic diversity of tomato-infecting begomovirus in RT Colombia"; RL Unpublished. XX RN [2] RP 1-2559 RA Lopez-Lopez K., Betancurt-Perez J.F., Vaca-Vaca J.C.; RT ; RL Submitted (21-NOV-2011) to the INSDC. RL Facultad de Ciencias Agropecuarias, Universidad Nacional de Colombia, RL Carrera 32 via Candelaria, Palmira, Valle 000, Colombia XX DR MD5; 6d1f456bb013ebee2051247ab3509756. XX FH Key Location/Qualifiers FH FT source 1..2559 FT /organism="Potato yellow mosaic virus" FT /segment="B" FT /host="Solanum lycopersicum" FT /isolate="Tulua/Valle del Cauca/2008" FT /mol_type="genomic DNA" FT /country="Colombia" FT /collected_by="K Lopez-Lopez & JC Vaca-Vaca" FT /collection_date="10-Dec-2008" FT /db_xref="taxon:10827" FT gene 402..1172 FT /gene="BV1" FT CDS 402..1172 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /note="NSP" FT /db_xref="GOA:K9M8N7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:K9M8N7" FT /protein_id="AFS42029.1" FT /translation="MYFTKYRSRAFKKQPRTNPRNNLVRGQSFFKRNDSKRRAFHTIKT FT ADESMMKAQRIHENQYGPEFAMDHNTAVSTFISYPDVTKSSPNRTRSYIKLKRLQFKGI FT VKVERVHTDVNMDCSVPKTEGVFSLVIVVDRKPHLGPSGGLLTFDELFGARIHSHGNLA FT IVPSLKDRFYIRHVTKRVVSVDKDSTMVDIEGVTTLSSKRFNCWSGFKDLDIDSRKGVY FT DNINKNALLVYYCWMSDTVSKASTFVSFDLDYIG" FT gene complement(1194..2072) FT /gene="BC1" FT CDS complement(1194..2072) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /note="MP" FT /db_xref="GOA:K9M8Q5" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:K9M8Q5" FT /protein_id="AFS42030.1" FT /translation="MNSQLVNPPHAFNYIESQRNEYRLSHDLTEIILQFPSTAAQLTAR FT LSRSCMKVDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQASWTFPIRCNIDLXYF FT SASFFSLKDPIPWKLYYRVSDTNVHQQTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFSDKDVDFSHVDYGKWERKPIRCASLSRGLRGPIEIGPGESWASRSTIEVGPSDGDS FT AIEHELHPYRDLQRLGASALDPGESASIVGANRAVSNITMSVAQLNELVRTTVQECIKS FT NCNSSQPKNFK" XX SQ Sequence 2559 BP; 729 A; 479 C; 563 G; 784 T; 4 other; cggatggccg cgcttttttt tggttaatgg gccgtctcac gtgctgggct ttgtttttat 60 aggcccatcg atatgttctt tccaggccca agttggactg acacctcact ttcctcgtta 120 tttcatattg ctttccttta actttatatc caatttcgac agctgttccg cataacttat 180 atattgacga cgtgggtaat tcttggccaa gttataatga ctatgtcgaa attgagttta 240 actactttgg agctcatgga ccacggaact gttattcaca cgtgtaccag ttaaattcat 300 cgtgtgaagc aaatttaaat aattgtttaa tgggatatgt ctatatattt actgactagg 360 aatgagctca ttattacgtg ggcaataata agtatctgat aatgtatttt actaagtacc 420 gaagtcgtgc gtttaaaaaa caaccacgta ctaacccacg taataatttg gtaagagggc 480 aatcattttt caagcgtaac gatagcaagc gtcgagcgtt tcataccatc aagacggctg 540 atgagtctat gatgaaggct caacgtattc atgagaatca atatggtcct gagtttgcaa 600 tggatcataa tacagcagtc tctacattca ttagctatcc tgatgtgact aagtctagcc 660 ccaaccgaac gaggtcatat attaagttaa aacgacttca gttcaagggt attgtcaaag 720 tggaacgtgt tcatacagac gtgaacatgg actgttcagt accaaagacg gaaggggtct 780 tttctttggt tattgtcgtg gatcgtaaac ctcatcttgg accatctggg ggacttctta 840 cattcgacga attgtttggt gcacggatcc acagtcatgg aaacttggca atagttccct 900 ctctgaagga tcgattctat atacgccacg tgacgaaacg tgtggtgtca gttgataaag 960 atagcacaat ggtggatatc gaaggtgtta caactctttc cagcaagcgt tttaattgtt 1020 ggtcaggttt taaggacctt gatatagatt ctcgaaaggg tgtctacgat aatattaata 1080 agaacgcctt gttagtgtat tattgctgga tgtcggatac tgtatccaaa gcatccacat 1140 ttgtatcatt tgaccttgat tatattggat gagtgtatat aataataaaa attttattta 1200 aaatttttgg gttgagaact attacagtta ctctttatac attcttggac agttgtcctt 1260 acaagttcat ttaactgggc tacggacatg gttatgttcg acacggccct gtttgcacca 1320 actatagatg cggactctcc cggatctaga gcgctggctc ccagcctttg cagatcacga 1380 tacggatgta actcatgttc tatcgccgag tctccatctg atggacccac ttctattgta 1440 ctcctggaag cccatgattc accaggtcct atctcaattg gtcctcttag tcctcttgac 1500 aaggatgcgc aacgtatggg cttcctctcc catttcccat agtcgacgtg agagaaatcc 1560 acatctttgt cactgaactg ttttgacagt atctttaccg ttggtgctct gaacggaatg 1620 tctacggaat gtttcgccgt cgacagtttc agcttccctt tgaacttggc aaagtgtgtt 1680 tgctgatgaa cgttcgtgtc ggaaactctg taatatagtt tccaggggat aggatctttt 1740 agcgagaaaa aggaagctga aaaatastgg agatctatgt tgcatcttat cggaaacgtc 1800 caggacgctt gtagtgattc attgtctgtc atccttttgt catgaatctc cactattact 1860 gaaccggtgg cgttgatggg tacctgttgc ctgtactcaa ttacgcagtg gtctactttc 1920 atacagctgc gactgagcct cgccgttaac tgcgccgccg ttgaaggaaa ttggagtatt 1980 atctcagtta gatcatgaga aagccgatat tcatttcgtt gggactctat ataattgaaa 2040 gcatgaggag gattaactaa ctgagaattc atttattaaa aataggccgc gcagcggcac 2100 cgcttcggga ataagtaaag aaaggacaaa gatagggttt cggtagaaag ttaagaaaag 2160 agaggataaa aatagggttt cgtcagaaag atgaagaaat tagtattatc attgaaggtg 2220 actctagaac gggcaagacg atgatatcga agagaagaaa sasaaacasg atactgctat 2280 ggaagaggct gatatgataa gattcaagga ttatgttgtt tatatagaca agatgttaat 2340 gatgaggcag caattaggat aaatcagaaa taattaaatg cattaataaa gaataaccta 2400 ttaagtggca tttttgtaaa taagaatgtt cccccgatat gttcccccaa atgctctggc 2460 tctcaaaact cttatgaatt gggggaactg ggggaacata tatagtagaa ggtcctatgg 2520 ttagattcgc cacgtggcgg ccatccgtta taatattac 2559 //