ID   JQ043440; SV 1; linear; genomic DNA; STD; VRL; 1201 BP.
XX
AC   JQ043440;
XX
DT   13-FEB-2012 (Rel. 111, Created)
DT   04-APR-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Papaya leaf curl virus-[Jatropha integerrima] coat protein (AV1) gene,
DE   partial cds; replication enhancer protein (AC3) and transcriptional
DE   activator protein (AC2) genes, complete cds; and replication-associated
DE   protein (AC1) gene, partial cds.
XX
KW   .
XX
OS   Papaya leaf curl virus-[Jatropha integerrima]
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1201
RA   Raj S.K., Snehi S.K., Srivastava A.;
RT   "Molecular identification of Papaya leaf curl virus associated with mosaic
RT   disease of Jatropha integerrima in India";
RL   Unpublished.
XX
RN   [2]
RP   1-1201
RA   Raj S.K., Snehi S.K., Srivastava A.;
RT   ;
RL   Submitted (19-NOV-2011) to the INSDC.
RL   Plant Molecular Virology, CSIR-National Botanical Research Institute, Rana
RL   Pratap Marg, Lucknow, U. P. 226001, India
XX
DR   MD5; a69f8cb35a44ed88c2309e1b5de1e3b2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1201
FT                   /organism="Papaya leaf curl virus-[Jatropha integerrima]"
FT                   /host="Jatropha integerrima"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /collected_by="Sunil Kumar Snehi"
FT                   /collection_date="Nov-2011"
FT                   /db_xref="taxon:1169120"
FT   gene            <1..381
FT                   /gene="AV1"
FT   CDS             <1..381
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:H6WAT3"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:H6WAT3"
FT                   /protein_id="AFA26473.1"
FT                   /translation="HTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNMHRDR
FT                   YQVLRKWHATVTGGEYASKEQALMKKFVRVNNYVVYNQQEAGKYENHTENALMLYMACT
FT                   HASNPVYATLKIRIYFYDSVSN"
FT   gene            complement(378..782)
FT                   /gene="AC3"
FT   CDS             complement(378..782)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication enhancer protein"
FT                   /db_xref="GOA:H6WAT4"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:H6WAT4"
FT                   /protein_id="AFA26474.1"
FT                   /translation="MDSRTGELITAAQAENGVFIWEIQNPLYFKITEHHNRPFTMKEDI
FT                   IKVQIQFNHNLRKVLGIHKCFLVYRIWMTSQPQTGRFLRVFKTQVLKYLDNLGIISINN
FT                   VNRAVDHVLWNVLHHMVYVDQSYSIKFNIY"
FT   gene            complement(523..927)
FT                   /gene="AC2"
FT   CDS             complement(523..927)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transcriptional activator protein"
FT                   /db_xref="GOA:H6WAT5"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:H6WAT5"
FT                   /protein_id="AFA26475.1"
FT                   /translation="MRSSSPSKAHSTQVPIKVQHRLAKKRNRRRRVDLPCGCSYFIALA
FT                   CHNYGFTHRGTHHCSSSREWRVYLGDSKSPVFQDNRTPQPSIHNERRHNQSPNTVQSQP
FT                   EESVGDTQMFSSLPNLDDFTASDWSFLKGI"
FT   gene            complement(830..>1201)
FT                   /gene="AC1"
FT   CDS             complement(830..>1201)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replication-associated protein"
FT                   /db_xref="GOA:H6WAT6"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="UniProtKB/TrEMBL:H6WAT6"
FT                   /protein_id="AFA26476.1"
FT                   /translation="YLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS
FT                   NTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALKNWALKNAIFVTLEGPLYS
FT                   GSNQSAAQASQEEEQTSSC"
XX
SQ   Sequence 1201 BP; 332 A; 222 C; 264 G; 383 T; 0 other;
     cacacgaaca gtgtcatgtt ctttcttgtt cgagaccgac gtcctgtaga taagccacaa        60
     gactttggag aggtatttaa tatgtttgac aacgagccca gcactgctac tgtgaagaat       120
     atgcacagag atcgttatca ggtgttgagg aagtggcatg caactgtcac cggtggagaa       180
     tacgcgtcaa aggaacaggc attaatgaag aagtttgtta gggttaataa ttatgttgta       240
     tataaccagc aagaggctgg gaaatatgag aatcatactg agaatgcatt gatgttgtat       300
     atggcatgta ctcatgcctc taacccagtg tatgctacgt tgaaaatacg gatttatttc       360
     tatgattcag tatcgaatta ataaatatta aattttattg aatatgattg gtctacatat       420
     accatgtgat gtaatacatt ccataataca tgatcaacag ctctatttac attgttaata       480
     ctgataattc ctaaattatc taaatactta agcacttggg tcttaaatac ccttaagaaa       540
     cgaccagtct gaggctgtga agtcatccag attcggtaga ctagaaaaca tttgtgtatc       600
     cccaacactt tcctcaggtt gtgattgaac tgtatttgga ctttgattat gtcttctttc       660
     attgtgaatg gacggttgtg gtgttctgtt atcttgaaat acaggggatt ttgaatctcc       720
     cagataaaca cgccattctc tgcttgagct gcagtgatga gttcccctgt gcgtgaatcc       780
     ataattgtga caggctagtg ctatgaaata tgaacatcca caagggagat caacacgacg       840
     acgtctgttc ctcttcttgg ctagcctgtg ctgcactttg attggaacct gagtagagtg       900
     ggccttcgag ggtgacgaag atcgcattct ttaaagccca atttttcaat gcgttatttt       960
     tctcttcgtc caagaactct ttatagcttg agttgggtcc tggattgcag aggaagatag      1020
     tgggtattcc gcctttaatt tgaactggct ttccgtactt tgtatttgat tgccagtccc      1080
     tttgggcccc catgaattct ttaaagtgct ttaggtagtg ggggtcgacg tcatcaatga      1140
     cgttgtacca ggcatcatta ctgtagactt ttgggctaag gtctagatga ccacacaaat      1200
     a                                                                      1201
//