ID JQ034613; SV 1; circular; genomic DNA; STD; VRL; 2780 BP. XX AC JQ034613; XX DT 20-MAR-2012 (Rel. 112, Created) DT 20-MAR-2012 (Rel. 112, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate HNHX, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2780 RA Hu J., Liu X.; RT ; RL Submitted (16-NOV-2011) to the INSDC. RL Bio-technology Center, Zhengzhou Vegetable Research Institute, No. 6 RL Changjiang Middle Road, Zhengzhou, Henan 450015, China XX DR MD5; 9c5a62792fc161b5041d812d37c5f319. XX FH Key Location/Qualifiers FH FT source 1..2780 FT /organism="Tomato yellow leaf curl virus" FT /host="tomato" FT /isolate="HNHX" FT /mol_type="genomic DNA" FT /country="China:Henan Province, Anyang, Henan province" FT /collected_by="Jingang Hu" FT /collection_date="10-Aug-2011" FT /proviral FT /db_xref="taxon:10832" FT gene 147..497 FT /gene="AV2" FT CDS 147..497 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2EI17" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2EI17" FT /protein_id="AFD22875.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PEAQNIQNVSKP" FT gene 307..1083 FT /gene="AV1" FT CDS 307..1083 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q17UU2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q17UU2" FT /protein_id="AFD22876.1" FT /translation="MSKRPGDIIISTPASKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1080..1484) FT /gene="AC3" FT CDS complement(1080..1484) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:H9BK49" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:H9BK49" FT /protein_id="AFD22877.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLRNNDI FT ISIQIRFNHNIRKALGIHKCFLNFRIWTTLQPQTGRFLRVFRYQVLKYLYSLGVISINN FT VIRAVDHVLYDVLENTINVTATHDIKYKFY" FT gene complement(1225..1632) FT /gene="AC2" FT CDS complement(1225..1632) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:H9BK50" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:H9BK50" FT /protein_id="AFD22878.1" FT /translation="MQSSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHI FT NCNNHGFTHRGTHHCSSSREWRFYLGDKQSPLFQDNRTQPEAISKEQRHHFHSDKIQPQ FT HQEGIGDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1541..2614) FT /gene="AC1" FT CDS complement(1541..2614) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:H9BK51" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:H9BK51" FT /protein_id="AFD22879.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDSGSARRGQQSANDAYAEALNSGSKSEALNILEEKAPKDYILQFHNL FT SSNLDRIFNPPLEVYISPFLSSSFNQVPDELDEWVAENVVSSAARPWRPISIVIEGDSR FT TGETMWARSLGPHNYLCGHLDLSPKVYSNDVWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNAIFVTLYEPLFA FT SINQGPTQDSQEETNKA" FT gene complement(2170..2463) FT /gene="AC4" FT CDS complement(2170..2463) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="GOA:Q17UU4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q17UU4" FT /protein_id="AFD22880.1" FT /translation="MGNHISMCLSNSKANTNVRTNGSSTWYPQTGQHISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSIADQLEEVSNLPTTHMPRHSIQAVNPRPSIY" XX SQ Sequence 2780 BP; 758 A; 532 C; 612 G; 878 T; 0 other; accggatggc cgcgccttct ctttttatgt ggtccccacg agggttccac atacgtcact 60 gtcaaccaat caaatagcat cctcaaacgt tagataagtg ttcatttgtc ttatatactt 120 ggtccccaag tagtctgtct tgcaatatgt gggatccact tctaaatgaa tttcctgaat 180 ctgttcacgg atttcgttgt atgttagcta ttaaatattt gcagtccgtt gaggaaactt 240 acgagcccaa tacattgggc cacgatttaa ttagggatct tatatctgtt gtaagggccc 300 gtgactatgt cgaagcgacc aggcgatata atcatttcca cgcccgcctc gaaggttcgc 360 cgaaggctga acttcgacag cccatacagc agccgtgctg ctgtccccat tgtccaaggc 420 acaaacaagc gacgatcatg gacgtacagg cccatgtacc ggaagcccag aatatacaga 480 atgtatcgaa gccctgatgt tcctcgtgga tgtgaaggcc catgtaaagt ccagtcttat 540 gagcaacggg atgatattaa gcatactggt attgttcgtt gtgttagtga tgttactcgt 600 ggatctggaa ttactcacag agtgggtaag aggttctgtg ttaaatcgat atatttttta 660 ggtaaagtct ggatggatga aaatatcaag aagcagaatc acactaatca ggtcatgttc 720 ttcttggttc gtgatagaag gccctatgga aacagcccaa tggattttgg acaggttttt 780 aatatgttcg ataatgagcc cagtaccgca actgtgaaga atgatttgcg ggataggttt 840 caagtgatga ggaaatttca tgctacagtt attggtgggc cctctggaat gaaggaacag 900 gcattagtta agagattttt tagaattaac agtcatgtaa cttataatca tcaggaggca 960 gccaagtatg agaaccatac tgaaaacgcc ttgttattgt atatggcatg tacgcatgcc 1020 tctaatccag tgtatgcaac tatgaaaata cgcatctatt tctatgattc aatatcaaat 1080 taataaaatt tatattttat atcatgagtt gctgttacat ttattgtgtt ttcaagtaca 1140 tcatacaata catgatcaac cgctctgatt acattgttaa ttgaaattac accaagacta 1200 tataaatact taagaacttg atatctaaat actcttaaga aacgaccagt ctgaggctgt 1260 aatgtcgtcc aaattcggaa gttgagaaaa catttgtgaa tccccaatgc cttcctgatg 1320 ttgtggttga atcttatctg aatggaaatg atgtcgttgt tccttagaaa tggcctctgg 1380 ctgtgttctg ttatcttgaa atagagggga ttgtttatct cccagataaa aacgccattc 1440 tctgcttgag gagcagtgat gagttcccct gtgcgtgaat ccatgattgt tgcagttgat 1500 gtggaggtag tatgagcagc cacagtctag gtctacacgc ttacgcctta ttggtttctt 1560 cttggctatc ttgtgttgga ccttgattga tacttgcgaa cagtggctcg tagagggtga 1620 cgaagattgc attcttgaga gcccaatttt tcaaggatat gtttttttct tcgtctagat 1680 attccctata tgaggaggta ggtcctggat tgcagaggaa gatagtggga attccccctt 1740 taatttgaat gggcttcccg tactttgtgt tgctttgcca gtcccgctgg gcccccatga 1800 attccttgaa gtgctttaaa taatgcgggt ctacgtcatc aatgacgttg taccacacat 1860 cattactgta cacctttggg cttaggtcta gatgtccaca taaataatta tgtgggccta 1920 gagacctggc ccacattgtt tcgcctgttc tgctatcacc ctcaatgaca atacttatgg 1980 gtctccatgg ccgcgcagcg gaagatacga cgttctcggc gacccactcg tcaagttcat 2040 ctggaacttg attaaaagaa gaagaaagaa atggagaaat ataaacttct aaaggaggat 2100 taaaaatcct atctaaattt gaacttaaat tatgaaattg taaaatatag tcctttgggg 2160 ccttctcttc taatatattg agggcctcgg atttactgcc tgaattgagt gcctcggcat 2220 atgcgtcgtt ggcagattgc tgacctcttc tagctgatcc gctatcgatt tggaaaactc 2280 caaaatcaat gaagtctccg tctttctcca cgtaggtctt gacatctgtt gagctcttag 2340 ctgcctgaat gttcggatgg aaatgtgctg acctgtttgg ggataccagg tcgaagaacc 2400 gttggttctt acattggtat ttgccttcga attggataag cacatggaga tgtggttccc 2460 cattctcgtg gagttctctg caaactttga tgtatttttt atttgttggg gtttctaggt 2520 tttttaattg ggaaagtgct tcctctttag agagagaaca attgggatat gttaggaaat 2580 aatttttggc atatatttta aataaacgag gcatgttgaa atgaattggt gtccctcaaa 2640 gctctatggc aatcggtgta tcggtgtctt acttatacct ggacacctaa tggctatttg 2700 gtaattttgt aaaagtacat tgcaattcaa cattcaaaat tcaaaaatga aattaataaa 2760 gcggccatcc gtataatatt 2780 //