ID   JQ031716; SV 1; linear; genomic RNA; STD; VRL; 852 BP.
XX
AC   JQ031716;
XX
DT   25-JAN-2012 (Rel. 111, Created)
DT   25-JAN-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Grapevine virus D isolate Garg capsid protein and putative RNA binding
DE   protein genes, complete cds.
XX
KW   .
XX
OS   Grapevine virus D
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Vitivirus.
XX
RN   [1]
RP   1-852
RA   Fajardo T.V.M., Dubiela C.R., Eiras M., Souto E.R., Nickel O.;
RT   "Detection and molecular characterization of the Grapevine virus D";
RL   Unpublished.
XX
RN   [2]
RP   1-852
RA   Fajardo T.V.M., Dubiela C.R., Eiras M., Souto E.R., Nickel O.;
RT   ;
RL   Submitted (16-NOV-2011) to the INSDC.
RL   Laboratorio de Virologia, Embrapa Uva e Vinho - Embrapa - Brazil, Rua
RL   Livramento, 515, Bento Goncalves, RS 95700-000, Brazil
XX
DR   MD5; 0c5a32812d75e9e7a8d0d73f8f291814.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..852
FT                   /organism="Grapevine virus D"
FT                   /host="Vitis vinifera cv. Garganega"
FT                   /isolate="Garg"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /collection_date="14-Jul-2011"
FT                   /db_xref="taxon:51617"
FT   CDS             10..495
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /note="coat protein"
FT                   /db_xref="GOA:H2ESC1"
FT                   /db_xref="InterPro:IPR008879"
FT                   /db_xref="UniProtKB/TrEMBL:H2ESC1"
FT                   /protein_id="AEY64188.1"
FT                   /translation="MYLRTLFGYIALVGTSKKAQHYGEVDIIGPKANRINVDSRGRINI
FT                   SEKVASIMALSRAVSEGPLVGATLRQVCEPFAQEAYEMLAKMAEMGLYSQLARKMARLG
FT                   NKEPQVMFDFASGLDISRLTLQEATVIQAMHSRLFRTEGAKGVFNAQSSVGEQAVEI"
FT   CDS             496..771
FT                   /codon_start=1
FT                   /product="putative RNA binding protein"
FT                   /db_xref="InterPro:IPR008891"
FT                   /db_xref="UniProtKB/TrEMBL:H2ESC4"
FT                   /protein_id="AEY64189.1"
FT                   /translation="MDDPSFLAGRSSYAKKRRAKRMNVCKCGAILHNNPDCRKKAISGH
FT                   KIDRLEFVKRGRVTLSGETPVYRTWIKWVECAYGIVVDPSDESEVE"
XX
SQ   Sequence 852 BP; 242 A; 147 C; 258 G; 205 T; 0 other;
     gacgcaggga tgtaccttag gacgctcttc gggtacatag ctctggtggg tactagtaag        60
     aaggcgcagc attatgggga agttgatatc ataggaccaa aggctaatag gattaatgta       120
     gactctagag gtagaataaa cataagcgag aaggtggcga gtataatggc tctcagcagg       180
     gcagtgagcg agggaccgtt ggtgggagca actctgaggc aggtgtgtga accgttcgca       240
     caggaagctt acgagatgct ggctaagatg gctgaaatgg gactgtactc tcaattggct       300
     cgtaagatgg cgaggcttgg caacaaggaa cctcaagtga tgtttgactt tgcgtccggt       360
     ctggatataa gtcgtttgac attgcaagag gcaactgtta ttcaggctat gcattctcgc       420
     ctctttcgta ctgaaggtgc taaaggagta ttcaacgccc aatcgtcggt tggagagcag       480
     gcagttgaga tatagatgga tgacccatca tttctcgcag gtaggagtag ttatgctaag       540
     aagcgtaggg ctaagcgtat gaacgtatgt aagtgtggtg ctatattgca caataatcct       600
     gactgtagga agaaagccat ttccgggcac aagattgaca ggttagagtt cgtgaaacgg       660
     ggaagagtaa ccctctcggg tgagactccc gtctatcgga cttggattaa atgggtcgag       720
     tgtgcgtacg gtatagtggt ggatccttct gacgagtcag aggtagaata aatcaataaa       780
     taaaaagtaa gaagcgcgcg atagtggagc taacttaaag tgtgaagcga gcgcaatttc       840
     cataagtaga gg                                                           852
//