ID JQ013971; SV 1; linear; genomic RNA; STD; VRL; 2989 BP. XX AC JQ013971; XX DT 22-FEB-2012 (Rel. 111, Created) DT 28-AUG-2012 (Rel. 113, Last updated, Version 2) XX DE Citrus leaf blotch virus strain Actinidia clone 5D replicase polyprotein DE gene, partial cds; and movement protein gene, complete cds. XX KW . XX OS Citrus leaf blotch virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Citrivirus. XX RN [1] RP 1-2989 RA Chavan R.R., Blouin A.G., Cohen D., Pearson M.N.; RT "Characterization of complete genome of a novel virus infecting Actinidia RT chinensis (isolate M3-A) from China resembling Citrus leaf blotch virus"; RL Unpublished. XX RN [2] RP 1-2989 RA Chavan R.R., Pearson M.N.; RT ; RL Submitted (12-NOV-2011) to the INSDC. RL School of Biological Sciences, University of Auckland, Thomas Building, RL Private Bag 92019, Symonds Street, Auckland, North Island 1142, New Zealand XX DR MD5; ce652ad8ac36865c4a813c1a27022faa. XX FH Key Location/Qualifiers FH FT source 1..2989 FT /organism="Citrus leaf blotch virus" FT /strain="Actinidia" FT /isolate="F-HY" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="Nicotiana occidentalis inoculated with FT leaf sap of Actinidia chinensis" FT /collection_date="20-Sep-2007" FT /identified_by="Dan Cohen and Arnaud G. Blouin" FT /clone="5D" FT /db_xref="taxon:129141" FT CDS <1..1845 FT /codon_start=1 FT /product="replicase polyprotein" FT /note="ORF 1" FT /db_xref="GOA:H6W102" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:H6W102" FT /protein_id="AFA43556.1" FT /translation="VLLVESDLEKKAFSPIINVMTFGESQGLTFNHVCILLSESSAASN FT EFRWMVALTRAKTRFSFCSTCLGGIDDFKIKKGESLVTSILQGEKITFERLNMMVKCNL FT IKQEKKNGCSDEVDREERLEGDPFLKPFIFLGQRIPKDQEKIEEVEIEEPRCQTHLYIT FT EPNFGLCYNFDFIREKEQREYREDMLVTNQFCDSYDKVHINGKRETPGPMRFKAIYPKH FT SADDDMTFWMAVKKRLIFREEEENYQRLSRAHLVGGLLYRNFKNKLGLEFTFDQGLLED FT SINAFERKKLEKSRGTIKSHSIRSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLA FT CFQHLILVQFAPWCRYLETQIRNQLPEEIYVHSNKNFDDLNQWVKKFFQRDIFVESDYE FT AFDASQDEYILSFEIHLMKDANFPQTVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLF FT NTLANMAFTLCRYEWRRGQPIAFAGDDMCALNNLPVCHAFDDLFELMSLKAKVERTESP FT MFCGWRLTPYGIVKEPELVYNRFQVAIEEGKVMECLENYAIEVSYAYSLSERLYEVLKS FT ERQIQYHQAVVRFIVTHIDKLKTKVRDLFLEQSSDEDI" FT CDS 1845..2933 FT /codon_start=1 FT /product="movement protein" FT /note="ORF 2" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:H6W105" FT /protein_id="AFA43557.1" FT /translation="MASLINVSSLVNRVKLDQSIIGSDEISKLYGSDAPLVFKDEVKMV FT IPGNAEGEAIKLQANILTADRLQSIRNAKVDGKEAAYLHLGFVPIAIRSLLPSGNEQIW FT GRCALVDTSRTRAETAVIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLEL FT HGVDLREERSVAAIITGLTCTPTNKMVLLHKIECDTPKWSLCDIIEQVEDEEESKKAFE FT NMFNASSSNLIDLGQEQWLDEGKRVPIIGNLAIKGFGKKVMPVRRRNLTTKNLMKDYVS FT HVKSETASLKRSQSGGDWGNDRLRKYLEEQASEQARHSVDQQVARVPKLKTIEVTGLET FT VHDLKSKIDKAESSTASDTGTK" XX SQ Sequence 2989 BP; 956 A; 537 C; 716 G; 780 T; 0 other; gttcttttgg ttgaatcaga tttggaaaag aaagcctttt caccaataat taatgtcatg 60 acttttggtg aatcacaagg cttaaccttc aatcatgttt gcatcttgct atcagaatca 120 agcgcggcat ccaatgaatt cagatggatg gtggcactca cacgtgctaa aactagattt 180 tcattttgct ccacctgtct tggcggcata gatgatttca aaatcaaaaa aggagaaagc 240 ttggttactt caatcctcca gggggaaaaa attacatttg aaagattgaa catgatggtc 300 aagtgtaatc taattaaaca ggaaaaaaaa aatgggtgca gtgacgaagt tgatcgtgaa 360 gagaggctgg aaggggatcc ttttctgaag ccttttatct ttcttgggca gaggattcca 420 aaagaccaag aaaaaattga ggaagttgag atagaggaac ctagatgtca aacccatttg 480 tacataactg agcccaattt tggcttatgt tacaattttg acttcatcag ggagaaggaa 540 caaagagagt acagagaaga catgcttgtg accaaccaat tttgtgacag ttatgacaaa 600 gtgcacatta acgggaaaag agaaactcct gggcccatga gattcaaagc tatttacccc 660 aagcactctg cggatgatga catgactttc tggatggctg tcaagaaacg gttgattttt 720 agagaggaag aggaaaatta ccaaaggtta tcaagggcac atctggttgg tggcctgttg 780 tacaggaact tcaaaaacaa actgggtcta gaatttacct ttgaccaggg cttgctcgag 840 gatagcatca atgcatttga aagaaaaaaa ttggaaaagt cgcgtggtac aatcaaatct 900 catagcatta ggtcggacat tgattgggcc ctcaacgatg tgtttctatt catgaagagc 960 caactgtgca ccaaatatga aaagcagttc gttgacgcaa aagctgggca aactcttgca 1020 tgcttccagc atttgatttt ggtccaattt gcaccgtggt gcaggtattt ggagacacag 1080 atcagaaacc agcttccgga ggagatctat gtccactcaa acaagaattt cgatgatcta 1140 aaccaatggg ttaagaagtt cttccagagg gacatatttg tggaatcgga ttatgaggca 1200 tttgatgcca gccaagatga gtacatcctg tcatttgaaa tacatcttat gaaggacgct 1260 aattttcctc agacagtcat cgatgcttat atagacctta aatgtaaact gggatgcaag 1320 ttgggacatt tctccatcat gaggttcacc ggggaatttt gcaccttttt attcaacact 1380 ttggccaata tggccttcac attgtgcaga tatgaatgga ggagggggca gccaattgca 1440 ttcgcgggcg atgatatgtg cgctttaaat aatttgccgg tctgtcatgc cttcgatgac 1500 ctttttgaac tgatgagtct caaagcaaaa gtggaaagaa ctgagagccc aatgttttgt 1560 ggttggagat tgacacctta cggcatagtc aaagaacctg agctggtgta taaccggttt 1620 caggtcgcca ttgaagaagg caaggtaatg gagtgccttg aaaactatgc aattgaggtt 1680 tcttacgcct acagtttaag tgagaggctc tatgaagttt tgaaaagtga gagacagatt 1740 caatatcatc aggctgttgt gagattcata gtaacacaca tcgacaagct caaaacaaag 1800 gtaagagatc tcttcctgga acagtcctct gacgaggata tctaatggct tccctcatta 1860 atgtaagctc acttgtgaat agggttaagt tagatcagag cataattggt agtgatgaga 1920 ttagcaagtt gtatggttct gatgcaccat tggttttcaa agatgaagtt aaaatggtca 1980 ttcctggtaa cgctgaaggg gaagccatta aactccaagc aaacattctg acagcagata 2040 gattgcagtc aataagaaat gcaaaggtgg atggaaaaga agctgcttac ctacaccttg 2100 gatttgttcc catagccatc agatcgctgc taccatcagg aaatgaacaa atctggggga 2160 gatgcgcatt agttgacact agtaggacaa gagctgagac cgccgtgata gatgaattcg 2220 agttcaagtt cacaaagaag cagccatttg cagccaagct actgacaatc aatgcagcag 2280 tcgacatcaa ctgcaaagtt agtgtcggca gcatacaggt ccttcttgaa ttacatgggg 2340 ttgatcttag ggaagagcgc tccgttgccg caataatcac tggtctaact tgcacaccca 2400 ccaacaaaat ggtgttactg cataagattg agtgtgacac tccaaagtgg tcactttgtg 2460 acataattga acaggttgaa gatgaagagg agtcgaaaaa agcttttgaa aatatgttca 2520 atgcctcatc ctccaatctg attgatctgg ggcaggagca atggctggat gagggaaaga 2580 gagtgccaat cataggcaat ttggccatta aggggtttgg gaaaaaagtg atgcctgtta 2640 gaagaagaaa cttgacaaca aagaatctca tgaaagatta tgtgtcccat gttaagtctg 2700 aaactgcgtc tctgaaaagg agtcagagtg gaggagattg gggtaatgat agattgagga 2760 agtatctcga agagcaagca tcagaacagg ctagacactc agttgaccag caagtcgcga 2820 gagttccaaa attgaagact attgaagtga cgggattgga gactgtacat gacctcaaga 2880 gcaaaataga taaggcagag tcatcaactg ccagtgacac tggaaccaag taatcagaac 2940 cgttaaactt agtgtaaata ttaggttagc gatagattat tgtacattc 2989 //