ID JQ013378; SV 1; linear; genomic RNA; STD; VRL; 2445 BP. XX AC JQ013378; XX DT 23-JAN-2012 (Rel. 111, Created) DT 20-MAY-2012 (Rel. 112, Last updated, Version 2) XX DE Sclerotinia sclerotiorum mitovirus 2, complete genome. XX KW . XX OS Sclerotinia sclerotiorum mitovirus 2 OC Viruses; Riboviria; Narnaviridae; Mitovirus; unclassified Mitovirus. XX RN [1] RP 1-2445 RX DOI; 10.1016/j.virol.2012.03.015. RX PUBMED; 22520836. RA Xie J., Ghabrial S.A.; RT "Molecular characterizations of two mitoviruses co-infecting a hyovirulent RT isolate of the plant pathogenic fungus Sclerotinia sclerotiorum"; RL Virology 428(2):77-85(2012). XX RN [2] RP 1-2445 RA Xie J., Ghabrial S.A.; RT ; RL Submitted (10-NOV-2011) to the INSDC. RL Department of Plant Pathology, University of Kentucky, 201F Plant Science RL Building, 1045 Veterans Dr., Lexington, KY 40546-0312, USA XX DR MD5; 0d187f64d82733a8a1edf436b75e9c81. XX FH Key Location/Qualifiers FH FT source 1..2445 FT /organism="Sclerotinia sclerotiorum mitovirus 2" FT /host="Sclerotinia sclerotiorum KL-1" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="2010" FT /db_xref="taxon:1133728" FT 5'UTR 1..311 FT gene 312..2342 FT /locus_tag="SsMV2_gp1" FT CDS 312..2342 FT /codon_start=1 FT /transl_table=4 FT /locus_tag="SsMV2_gp1" FT /product="RNA-dependent RNA polymerases" FT /note="RdRp" FT /db_xref="GOA:H2EQQ4" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProtKB/TrEMBL:H2EQQ4" FT /protein_id="AEX91879.1" FT /translation="MTQPLVLKLMKWVRKYYYKGTSPNLAAFTRHAIHLFFLWGKTKGW FT KWTATAFKLTRLAITRTLAGQELPRPFGISLCKKTNLPMMLPLQVRLAILRKDFLLISY FT VLTVLQLSRLILGTGVIESYDSITRPCTGSNPFTGASVSIVMKRMGIRRLDEPTSFTFP FT WVSTSGPNGISIATSFSDLMNIPQPILECLYTLGGPEFKEKVSSLKGFVETTNGLLWKL FT TKLDPDKTGNLLRRISIKKDKEYKSRPFAIVDYITQSALTPLHDRLYRVLGSIPQDCTF FT DQNKGFKDLLYGGGPYYSFDLTSATDRFPIFVQEMVLAWLTSEQYASAWVQAMVGIPFS FT TPNGPEVEFKCGQPLGAKSSWAMFTLSHHFVVQYCAMVLNIDNPRYKILGDDIVICDHA FT LAAKYLEVMSQLGVEISSVKTHVSENLFEFAKRFGLQSVEISSFPITALVSDINNYVSI FT VATLATTAVERGNLPLFVSGNTPRFWESLLKKEDKPRLVNNLVHSARLLSYLLMSNKPY FT LVAQSDLLRFAEAAGFGGLAISQVFAAYKRAVLYMKDREIDKLADMSMRFIRPVQSMLS FT QIMFLPWRGRVTVDYRKFIPIIDSIDSNKELYLSFREEFEKADDLVTLNKVLDDHPIRP FT MPNLNGLQPNRPKLLVGQTRAALIRALVKELTMLAKGEEPK" FT 3'UTR 2343..2445 XX SQ Sequence 2445 BP; 666 A; 564 C; 572 G; 643 T; 0 other; ggttttcgtg atcgtatcac gaataccacg gagaccccca ggggtaaatc cctcccactc 60 gacagagtgc ctcgggatcc ctgactttcc tcctacgcat tgttcaccta caaagtaggc 120 ggcagaacaa gcgagcctag ggctcggtcg ctacggcgcc tgactacccg acggccccac 180 ggtgtggttt agctagaaag ccaactagcg tgattaccta ccggggagaa acctattcag 240 ctcatgttac tgaaccgaaa ggtcactaca tgggcggtgt agattaagag gaagttcaat 300 tggtaagtct tatgactcaa ccactagttt taaaactaat gaaatgagtc cgtaagtact 360 attacaaagg aacttctccg aatctagccg cgtttacccg acacgcaatt cacttattct 420 tcctgtgagg gaagactaag gggtgaaagt ggaccgcgac agcgttcaag ctgactcggt 480 tggctatcac ccgtacactt gctggccagg agcttccacg accctttggg atctctttgt 540 gtaagaaaac aaacttacct atgatgttac cattacaggt gaggcttgct atcctacgta 600 aagatttcct cctaatatca tacgtcttaa cggttttaca actgtcgaga ctgatcttag 660 ggacaggggt catcgaatca tacgatagta tcactcgtcc gtgcacgggt tccaacccgt 720 tcacgggggc gagcgtatct atcgttatga aacgaatggg gatacgtcgt ttagatgaac 780 ccacatcttt cactttccct tgggtgtcca ctagcgggcc gaatggaatt tccatcgcta 840 catctttctc tgatttgatg aatatccctc agcccatcct tgagtgtttg tacactctcg 900 gagggcctga gtttaaggag aaggtgtcca gtttgaaagg attcgtagag accactaatg 960 gtcttctatg aaaacttacc aagctggatc cagataaaac tggtaacctc ctccggcgga 1020 tctccatcaa gaaagataaa gagtataagt cccgaccttt tgcaattgtc gattatataa 1080 cccagagcgc attgactcct ctacacgata gattatatcg cgtattagga tcaatacctc 1140 aggattgtac tttcgaccaa aacaaagggt ttaaagactt actgtacggt ggcggtccat 1200 attactcgtt cgatttaact tcggcaacag acagatttcc tatattcgta caggaaatgg 1260 tcttagcgtg gttaacgagt gagcagtatg cttccgcctg agtacaggct atggtgggaa 1320 ttcccttcag cacgcctaat ggtcccgagg tagagttcaa gtgtggtcaa cctctagggg 1380 caaaatcgtc atgagctatg ttcaccctgt cccatcattt tgtggtccag tactgtgcaa 1440 tggttttaaa cattgacaat cctagataca agattttggg ggatgacata gtgatatgcg 1500 atcacgccct agcggcgaaa tacttggagg ttatgtctca actaggagtc gagatctcgt 1560 cggttaagac tcacgtaagt gaaaacttat ttgagtttgc caaaagattc ggtctccagt 1620 cagttgagat atcaagtttc ccgatcaccg ctctcgtgtc agacataaac aactatgttt 1680 ccatagttgc tactctggcc acgacagctg tcgaacgtgg gaacttacct cttttcgtct 1740 ccggaaacac tcctcggttc tgggagagct tattgaagaa ggaggataaa cccagattag 1800 ttaataatct ggtccactct gctaggcttc tgtcatatct cctgatgtcc aataaaccgt 1860 acctggtagc tcagtctgac cttttaaggt ttgccgaggc tgcagggttt ggtggattgg 1920 ctatctctca ggtatttgct gcttataaaa gggcagtctt atacatgaag gatagggaga 1980 tagacaagct ggcagacatg tctatgcggt tcatacgacc cgtacagtcc atgctgtcgc 2040 aaataatgtt cctcccttgg cgaggccggg tgacggttga ctatagaaag tttataccga 2100 tcatcgactc tatcgactcc aacaaggagc tctatctgag cttccgagag gagttcgaga 2160 aagccgatga cctggtaacg ctaaataagg tgttggatga tcatccgatc aggccaatgc 2220 ctaatttaaa cggtctacaa ccaaatcgcc ctaaattgct ggtcggtcag acgcgagctg 2280 ccttaataag ggcactagtc aaagaattga ctatgctagc gaaaggagaa gaacctaagt 2340 aatgtactta ggaactcaca caccgcaaca aatagggtat tcgtacccgg ggggttgcgt 2400 gttattccac tcatggagtg gaaaaaaaaa aaaaaaaaaa aaaaa 2445 //