ID JQ013377; SV 1; linear; genomic RNA; STD; VRL; 2513 BP. XX AC JQ013377; XX DT 23-JAN-2012 (Rel. 111, Created) DT 20-MAY-2012 (Rel. 112, Last updated, Version 2) XX DE Sclerotinia sclerotiorum mitovirus 1, complete genome. XX KW . XX OS Sclerotinia sclerotiorum mitovirus 1 OC Viruses; Riboviria; Narnaviridae; Mitovirus; unclassified Mitovirus. XX RN [1] RP 1-2513 RX DOI; 10.1016/j.virol.2012.03.015. RX PUBMED; 22520836. RA Xie J., Ghabrial S.A.; RT "Molecular characterizations of two mitoviruses co-infecting a hyovirulent RT isolate of the plant pathogenic fungus Sclerotinia sclerotiorum"; RL Virology 428(2):77-85(2012). XX RN [2] RP 1-2513 RA Xie J., Ghabrial S.A.; RT ; RL Submitted (10-NOV-2011) to the INSDC. RL Department of Plant Pathology, University of Kentucky, 201F Plant Science RL Building, 1045 Veterans Dr., Lexington, KY 40546-0312, USA XX DR MD5; ab87778f9e49be090b10c56b98f75a72. XX FH Key Location/Qualifiers FH FT source 1..2513 FT /organism="Sclerotinia sclerotiorum mitovirus 1" FT /host="Sclerotinia sclerotiorum KL-1" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="2010" FT /db_xref="taxon:1133727" FT 5'UTR 1..418 FT gene 419..2494 FT /locus_tag="SsMV1_gp1" FT CDS 419..2494 FT /codon_start=1 FT /transl_table=4 FT /locus_tag="SsMV1_gp1" FT /product="RNA-dependent RNA polymerases" FT /note="RdRp" FT /db_xref="GOA:H2EQQ3" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProtKB/TrEMBL:H2EQQ3" FT /protein_id="AEX91878.1" FT /translation="MRKQSGLPFTIKYMKTVRLHITRYISGQPLRSNSNLVSLTDGFPT FT KFLYLKELIDSGDNKMIRFVLTLLGYTRSIIPTIKEKNQVAPDYSSISAPFKGDGSFDI FT PDEFIKEFISKYNLGFSPKWDNSLHYVSNKSSPMGKATLTGPFALFHMGHWNLTMLDHF FT QSLIGEGSFKVMIGEFLEIVFKDHRAFHIGTSTNGIGKISVVEDPELKMRPIAMVDYYS FT QLVLKPIHDGILKKLRTLPCDRTFTQDPFNNWGKTMGHKFWSLDLTSATDRFPISLQER FT VIAHLLGDESKARAWRNILVDRDYKLPSGGWTRYSVGQPMGAYSSWTTFTLTHHLVVHY FT AARLCGIVDFDRYILLGDDIVINHDKVARRYISIMNKLGVDISVAKTHVSKNTYEFAKR FT WVRKGIEISGLPLRGIVSNINVLPVVVKQLVLYLYSNTTLWRGSTTELILCVFKGVKIR FT KRFISQSNLRSSVEDIVFVIRQSLDLNTYEQIRLYLSRKIRIWEILIPKRDLIHGFIRE FT ILCLGLVSSAEDASFDLTRFYDKFESEFRRGDFDLMLLKRHPMVLAVYNKILDMKRTLM FT RVRNMDEMDLIDAMSLMRLDKPDKLMSNLRNSSQSISHIDMLWRRGFKKLEFTTNMTLM FT IGEFDPANVALMDDDGEDYFEITNLKPWESYYISNLSDLCDKLEILKTPVARNEYF" FT 3'UTR 2495..2513 XX SQ Sequence 2513 BP; 779 A; 453 C; 509 G; 772 T; 0 other; cgatcgatca tgatgcaatg gggctcttgg agacctttcg gtccccaaaa gcggctcaat 60 agagccatac acactttgtg tgtatcctgc gatcaactca gccgaggtct caaagccttg 120 ggttactgag tagtttgtag ccctggttac agtctaataa actgtaatcc tgggtaactt 180 gcttcaccgt tggcgggcac cgattataga tttcgtatct ataacgcagg ccacctgcgg 240 gggacctata gtgactcacc cgtagataag tcgggatcca gctatgtata acaactggac 300 actataggtg ctcttatttt aatatacaat catgaaacta gcaagttaat aattttaagg 360 ttttagactt actatttcac aaccggatat tagtaagagg ttataggaag tggaatcaat 420 gaggaagcaa tctggtttac catttactat caagtatatg aaaacagtcc gtcttcatat 480 tacgagatat ataagtggtc aaccgctaag atctaattcc aacttggttt cactaactga 540 tggttttcct acaaagttcc tttatttgaa ggaattaata gattcgggtg acaacaagat 600 gataagattt gttcttactc tcttggggta caccaggtct attataccta caataaagga 660 gaagaaccag gttgcaccag attatagttc gatatccgct ccatttaaag gagatgggag 720 tttcgatata cctgatgaat tcataaaaga attcattagt aaatataatc ttggtttctc 780 accgaagtgg gacaattcct tacattacgt aagtaataaa tcctctccga tgggaaaggc 840 aacattaact ggtccatttg cattgttcca tatgggacac tgaaatctaa cgatgttaga 900 ccacttccaa tccttgattg gagagggatc tttcaaagtt atgattggtg aatttcttga 960 aatagtattc aaggaccacc gtgcattcca tattggtaca tctacaaatg gtataggtaa 1020 aatatcagta gttgaagatc cagagttgaa aatgagacca atagctatgg tggattacta 1080 tagtcaattg gttcttaaac ctatacatga tggaatcctt aagaaattaa gaactctacc 1140 gtgtgatagg acttttactc aggatccctt caacaactgg ggtaagacca tggggcacaa 1200 gttttgatca cttgatctaa ctagtgccac agaccgtttc ccaatatctc ttcaagaacg 1260 tgtaattgct catctccttg gagatgaatc aaaagcacga gcctgaagga atattttagt 1320 tgatagggat tataaacttc catctggtgg ttgaacacgt tatagtgttg gacaaccgat 1380 gggagcctat agttcctgga ctacttttac tctaacacat catcttgtcg ttcactacgc 1440 cgcacgtctg tgtggtatag tggactttga taggtatatc cttcttggtg acgatattgt 1500 gattaatcac gataaagttg caagaagata tatctctatc atgaacaagt tgggtgtgga 1560 catctctgtt gcaaaaacac atgtgtctaa aaacacatat gaatttgcta agagatgagt 1620 aaggaaaggc attgagatat caggtctacc tttaagagga attgtatcaa atataaatgt 1680 attaccagtt gttgtaaaac aactagtttt gtatctatat tccaatacaa ctctttgaag 1740 aggtagcact actgaattga tcttatgtgt cttcaaaggc gtaaagatca gaaagagatt 1800 tatttctcaa tctaatctta gatcgtcggt tgaagatatt gtctttgtta tcagacaatc 1860 ccttgacctt aatacctatg aacagatacg gttgtatctt tcaaggaaaa taaggatttg 1920 ggaaattcta ataccaaaga gagatctaat tcacggtttt atccgtgaga tcttgtgtct 1980 aggtctagta agttctgctg aagatgcatc attcgatctt actcgttttt acgataagtt 2040 cgaatcggaa ttccgaagag gagatttcga tttgatgctt cttaagcggc atcccatggt 2100 gttggctgtc tataataaaa tcttagacat gaaacggacc ctaatgaggg tacgtaacat 2160 ggatgagatg gaccttatag atgcaatgtc tctcatgaga cttgacaaac cagataaact 2220 gatgtcaaat cttagaaatt cttcacaatc tataagtcat atagatatgc tttgaaggcg 2280 tggtttcaag aagcttgaat tcactaccaa catgacatta atgattggtg agtttgatcc 2340 cgccaatgta gcattaatgg atgatgatgg tgaagactac ttcgagatca ccaaccttaa 2400 accatgagaa tcctactata tctcaaactt gtcagattta tgtgacaagc ttgaaatcct 2460 aaagactccg gttgctagaa atgagtattt ctagtaatgt gctattgcac agc 2513 //