ID   JQ005051; SV 1; linear; genomic RNA; STD; VRL; 1771 BP.
XX
AC   JQ005051;
XX
DT   20-MAR-2012 (Rel. 112, Created)
DT   13-JUN-2012 (Rel. 113, Last updated, Version 2)
XX
DE   Prunus necrotic ringspot virus isolate Pch5 movement protein and coat
DE   protein genes, complete cds.
XX
KW   .
XX
OS   Prunus necrotic ringspot virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-1771
RA   Cui H.G., Hong N., Wang G.P., Wang A.M.;
RT   "Detection and genetic diversity of Prunus necrotic ringspot virus in the
RT   Niagara Fruit Belt, Canada";
RL   Can. J. Plant Pathol. 34(1):104-113(2012).
XX
RN   [2]
RP   1-1771
RA   Cui H., Hong N., Wang G., Wang A.;
RT   ;
RL   Submitted (08-NOV-2011) to the INSDC.
RL   Southern Crop Protection and Food Research Centre, Agriculture and
RL   Agri-Food Canada, 1391 Sandford St, London, Ontario N5V 4T3, Canada
XX
DR   MD5; 14dea02e1350e8e587a62309745cf5e6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1771
FT                   /organism="Prunus necrotic ringspot virus"
FT                   /segment="RNA3"
FT                   /host="peach"
FT                   /isolate="Pch5"
FT                   /mol_type="genomic RNA"
FT                   /country="Canada"
FT                   /collected_by="Hongguang Cui"
FT                   /collection_date="May-2011"
FT                   /identified_by="Hongguang Cui"
FT                   /db_xref="taxon:37733"
FT   5'UTR           <1..39
FT   CDS             40..891
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:H9BER8"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:H9BER8"
FT                   /protein_id="AFD32239.1"
FT                   /translation="MAGVSKNPSTSDFSVVECSMDEMSQISEDLHKLMLSDEMRALPTK
FT                   GCHILHLVNLPKSNILRLASKEQKGFLSRQADKVKKKIYRCVGRVFLVYVPIIQATTSG
FT                   LITLKLQNSDTGEISDVVTDVEANRAFVIMDRWGRSLVESADLNLLYSISCPDVRPGAR
FT                   VGEMMAFWDERMSRQQTYLEKGNPILFPIAETKPSKYLNDKKVLMSMVRSRILVGTEGC
FT                   DIAPENIVVKRLGDNRKVLTIQPKAPIVEEIKDDVEPLGSNGENHMEEKTVTVKVGSSG
FT                   SA"
FT   CDS             967..1647
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H9BES3"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="UniProtKB/TrEMBL:H9BES3"
FT                   /protein_id="AFD32240.1"
FT                   /translation="MVCRICNHTHAGGCRSCKKCHPNDALVPLRAQQRAANNPNRNRNP
FT                   NRVSSGIGPVVRPQPVVKTTWTVRGPNVPPRIPKGYVAHSHREVTTTEAVKYLSIDFTT
FT                   TLPQLMGQNLTLLTVIVRMNSMSSNGWIGMVEDYKVDQPDGPNALSRKGFLKDQPRGWQ
FT                   FEPPSDLDFDTFARTHRVVIEFKTEVPAGAKVLVRDLYVVVSDLPRVQIPTDVLLVDED
FT                   LLEI"
FT   3'UTR           1648..>1771
XX
SQ   Sequence 1771 BP; 472 A; 360 C; 472 G; 467 T; 0 other;
     tattcgtaat tccactagtt ggttgaatag tgtttcagta tggccggtgt cagtaaaaac        60
     ccctccacta gtgatttttc agtagtggag tgttctatgg acgaaatgag ccagatatca       120
     gaggatttgc ataaacttat gctgtccgat gagatgaggg cgttaccaac gaaaggttgt       180
     catatcctgc atttagttaa cctcccgaaa tccaatatac tgagattagc gagtaaggag       240
     cagaaaggtt tcctctcgcg acaggccgat aaagtaaaga agaaaattta cagatgtgta       300
     ggccgagtat tcctcgttta tgtaccgatc attcaggcaa cgacctcggg tctgataacc       360
     cttaagttgc aaaactccga tacaggagag atttcagacg tcgtgacaga cgtcgaagcc       420
     aaccgcgcct ttgttattat ggacagatgg ggaagatccc tggtggaatc agcagattta       480
     aatctgttgt attccatttc atgtccggac gtccgaccag gagccagagt gggagagatg       540
     atggcttttt gggatgagag gatgtcaagg cagcagactt acttggagaa agggaatcct       600
     atcttattcc cgattgccga gacaaaacct tcgaaatatc ttaatgataa gaaggtgttg       660
     atgtctatgg tccgaagtag gatattggta ggtacagaag ggtgcgatat agctcccgag       720
     aatatagtag tcaaacgatt aggggataat aggaaggttt tgactattca accgaaagcc       780
     ccgatcgtag aggaaattaa ggacgatgtt gaaccgttag gttcgaatgg tgaaaatcat       840
     atggaagaga agaccgtgac cgttaaggtc ggtagttctg gaagtgcttg agtgactatg       900
     tcacgagcgt gcgctttgcg cgagcgtttt tctttccttt cttccgaaca tcttttccat       960
     ttgataatgg tttgccgaat ttgcaatcat acccacgctg gtggatgccg ttcttgcaag      1020
     aagtgccatc cgaatgatgc tctggtccca ctcagggctc aacaaagggc tgcgaataac      1080
     ccgaatagga ataggaaccc gaatagggtt tcgagcggta taggacctgt ggtccgaccg      1140
     caaccggtcg tgaagaccac ttggaccgtg aggggtccga atgtgcctcc ccgaattccc      1200
     aagggttatg tagcacatag tcaccgagag gtgacgacga cagaggcagt gaagtacttg      1260
     agtattgact tcacgaccac tctccctcag ttgatgggtc agaatttgac cttattaact      1320
     gtcatagtcc gaatgaactc tatgagttcg aatggttgga tcgggatggt ggaggactat      1380
     aaggtggatc aacctgatgg tccgaatgcc ctgtctagga aggggttctt gaaggaccaa      1440
     ccgagaggtt ggcagttcga acctccctcc gatttagatt tcgacacttt tgcgcgtacg      1500
     catcgtgtcg tcatcgaatt caagaccgaa gtgcccgctg gggccaaggt cttggttagg      1560
     gatttgtacg tagtggtaag tgacttacca cgagtgcaaa ttccgactga tgtcttgctg      1620
     gtcgatgaag acctgcttga gatctagagt gagataagca cactcgaatt tctccgaatg      1680
     gaaagttcgc accaccggta gtggatattg cgaattagat ttttgaaagt cgcttcccgg      1740
     ctttcatgct tggaaatctt acctgcgtta g                                     1771
//