ID   JQ005050; SV 1; linear; genomic RNA; STD; VRL; 1862 BP.
XX
AC   JQ005050;
XX
DT   20-MAR-2012 (Rel. 112, Created)
DT   13-JUN-2012 (Rel. 113, Last updated, Version 2)
XX
DE   Prunus necrotic ringspot virus isolate Pch4 movement protein and coat
DE   protein genes, complete cds.
XX
KW   .
XX
OS   Prunus necrotic ringspot virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-1862
RA   Cui H.G., Hong N., Wang G.P., Wang A.M.;
RT   "Detection and genetic diversity of Prunus necrotic ringspot virus in the
RT   Niagara Fruit Belt, Canada";
RL   Can. J. Plant Pathol. 34(1):104-113(2012).
XX
RN   [2]
RP   1-1862
RA   Cui H., Hong N., Wang G., Wang A.;
RT   ;
RL   Submitted (08-NOV-2011) to the INSDC.
RL   Southern Crop Protection and Food Research Centre, Agriculture and
RL   Agri-Food Canada, 1391 Sandford St, London, Ontario N5V 4T3, Canada
XX
DR   MD5; bea82e7139f7213a24cf793dc61d8b22.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1862
FT                   /organism="Prunus necrotic ringspot virus"
FT                   /segment="RNA3"
FT                   /host="peach"
FT                   /isolate="Pch4"
FT                   /mol_type="genomic RNA"
FT                   /country="Canada"
FT                   /collected_by="Hongguang Cui"
FT                   /collection_date="May-2011"
FT                   /identified_by="Hongguang Cui"
FT                   /db_xref="taxon:37733"
FT   5'UTR           <1..136
FT   CDS             137..988
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:H9BET4"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:H9BET4"
FT                   /protein_id="AFD32237.1"
FT                   /translation="MAGVSKNPSTSDFSVVECSMDEMSQISEDLHKLMLSDEMKALPTK
FT                   GCHVLHLVNLPKSNVLRLASKEQKGFLSRQADKVKNKIYRCVGRVFLVYVPIIQATTSG
FT                   LITLKLQNSDTGEISDVVTDVEANRAFVIMDRWGRSLVESADLNLLYSISCPDVRPGAR
FT                   VGEMMAFWDERMSRQQTYLEKGNPILFPIAETKPSKYLNDKKVLMSMVRSRILAGTEGC
FT                   DIAPETIEVKRLGDNRKVLTIQPKAPIVEEVKGEDEPIGSNGENHMEEKTVTVKVGSSG
FT                   SA"
FT   CDS             1063..1737
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:B0FZ51"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="UniProtKB/TrEMBL:B0FZ51"
FT                   /protein_id="AFD32238.1"
FT                   /translation="MVCRICNHTHAGGCRSCKKCHPNGALVPLRAQQRAANNPNRNPNR
FT                   ASSGIGPVVRPQPVVKTTWTVRGPNVPPRIPKGFVAHNHREVTTTEAVKYLSIDFTTTL
FT                   PQLMGQNLTLLTVIVRMNSMSSNGWIGMVEDYKVEQPDGPNALSRKGFLKDQPRGWQFE
FT                   PPSDLDFDTFARTHRVVIEFKTEVPAGAKVLVRDLYVVVSDLPRVQIPTDVLLVDEDLL
FT                   EI"
FT   3'UTR           1738..>1862
XX
SQ   Sequence 1862 BP; 489 A; 377 C; 491 G; 505 T; 0 other;
     gatttctctt ttgcttgact aggtaccatt gaaacgaatt aaaagtccta tttctctagt        60
     aacatcccct ttgtgggttt agagattgtt ggttgtctat tcgtaattcc acttgttggt       120
     tgaatagtgt ttcagtatgg ccggtgtcag taaaaacccc tccactagtg atttttcagt       180
     agtggagtgt tctatggacg aaatgagcca gatatcagag gatttgcata aacttatgct       240
     gtccgatgag atgaaggcgt taccaacgaa aggttgtcat gtcctacatt tggttaacct       300
     cccgaaatcc aatgtactaa gattagcgag taaggagcag aaaggtttcc tctcgcgaca       360
     ggccgacaaa gtaaagaata agatttacag atgtgtaggc cgagtattcc tcgtttatgt       420
     accgattatt caagcaacga cttcgggttt gataaccctt aagttgcaga actccgacac       480
     aggagaaatt tcagacgtcg tgacggacgt cgaagccaat cgcgcctttg ttattatgga       540
     cagatggggg agatccctgg tagagtcagc agatttgaat ctgttgtatt ctatttcatg       600
     tccggacgtc cgacccggag ccagagtggg agagatgatg gctttttggg atgagaggat       660
     gtcaaggcag cagacgtact tagagaaagg gaatcctatt ttattcccga tagctgagac       720
     aaaaccttcg aaatatctta atgataagaa ggttttgatg tctatggtcc gaagtaggat       780
     cttggcaggt acggaagggt gcgatatagc ccccgagact atagaagtca aacgattagg       840
     ggacaatagg aaggttttga ctattcaacc gaaagcccct atcgtagagg aagttaaggg       900
     cgaagatgaa ccgataggtt cgaatggtga gaatcatatg gaagagaaga ctgtgaccgt       960
     taaggtcggc agttctggaa gtgcttaagt gactttgtca cgagcgagcg cctttgcgcg      1020
     agcgtttttc tttctttctt tcttccgaat tttcacctaa caatggtttg ccgaatttgc      1080
     aatcataccc acgctggtgg atgccgttct tgcaagaagt gccatccgaa tggagctctg      1140
     gtcccactca gggctcaaca gagggctgcg aataacccga atagaaaccc gaatagggct      1200
     tcgagtggta tcggaccagt ggtccgacca caaccggtcg tgaagaccac ttggaccgtg      1260
     agaggtccga acgtgcctcc ccgaattcct aaggggtttg tggcacataa tcaccgagag      1320
     gtgacgacga cagaggcagt gaagtacttg agtatcgact tcacgaccac tctccctcag      1380
     ttgatgggtc agaatttgac cctattgact gttatagtcc gaatgaactc tatgagttcg      1440
     aatggttgga ttgggatggt ggaggactat aaggtggaac aacctgatgg tccgaatgcc      1500
     ctgtctagga aggggttctt gaaggaccaa ccgagaggtt ggcagttcga acctccttcc      1560
     gatttagatt tcgacacttt tgcgcgtacg catcgtgtcg ttatcgaatt caagaccgaa      1620
     gtgcccgctg gggccaaggt cttggttagg gatttgtacg tagtggtaag tgatttacca      1680
     cgagtgcaaa ttccgactga tgtcttgctg gtcgatgaag acctgcttga gatctagagt      1740
     gagataagca cactcgaatt ttctccgaat ggaaagttcg caccaccgat agtggatatt      1800
     gcgaattaga tttctgaagg tcgcttcccg actttcatgc ttggaaatct tacctgtgtt      1860
     ag                                                                     1862
//