ID   JQ005043; SV 1; linear; genomic RNA; STD; VRL; 1861 BP.
XX
AC   JQ005043;
XX
DT   20-MAR-2012 (Rel. 112, Created)
DT   13-JUN-2012 (Rel. 113, Last updated, Version 2)
XX
DE   Prunus necrotic ringspot virus isolate Chr15 movement protein and coat
DE   protein genes, complete cds.
XX
KW   .
XX
OS   Prunus necrotic ringspot virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-1861
RA   Cui H.G., Hong N., Wang G.P., Wang A.M.;
RT   "Detection and genetic diversity of Prunus necrotic ringspot virus in the
RT   Niagara Fruit Belt, Canada";
RL   Can. J. Plant Pathol. 34(1):104-113(2012).
XX
RN   [2]
RP   1-1861
RA   Cui H., Hong N., Wang G., Wang A.;
RT   ;
RL   Submitted (08-NOV-2011) to the INSDC.
RL   Southern Crop Protection and Food Research Centre, Agriculture and
RL   Agri-Food Canada, 1391 Sandford St, London, Ontario N5V 4T3, Canada
XX
DR   MD5; ac471301697f4245774e248b64020af4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1861
FT                   /organism="Prunus necrotic ringspot virus"
FT                   /segment="RNA3"
FT                   /host="cherry"
FT                   /isolate="Chr15"
FT                   /mol_type="genomic RNA"
FT                   /country="Canada"
FT                   /collected_by="Hongguang Cui"
FT                   /collection_date="May-2011"
FT                   /identified_by="Hongguang Cui"
FT                   /db_xref="taxon:37733"
FT   5'UTR           <1..135
FT   CDS             136..987
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:O71130"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:O71130"
FT                   /protein_id="AFD32223.1"
FT                   /translation="MAGVSKNPSTSDFSVVECSMDEMSQISEDLHKLMLSDEMRALPTK
FT                   GCHILHLVNLPKSNVLRLASKEQKGFLSRQADKVKNKIYRCVGRVFLVYVPIIQATTSG
FT                   LITLKLQNSDTGEISDVVTDVEANRAFVIMDRWGRSLVESADLNLLYSISCPDVRPGAR
FT                   VGEMMAFWDERMSRQQTYLEKGNPILFPIAETKPSKYLNDKKVLMSMVRSRILAGTEGC
FT                   DIAPENIEVKRLGDNRKVLTIQPKAPIVEEVKDEDEPTGSNGENHMEEKTVTVKVGSSG
FT                   SA"
FT   CDS             1062..1736
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q9YKE6"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="UniProtKB/TrEMBL:Q9YKE6"
FT                   /protein_id="AFD32224.1"
FT                   /translation="MVCRICNHTHAGGCRSCKKCHPNGALVPLRAQQRAANNPNRNPNR
FT                   ASSGTGPVVRPQPVVKTTWTVRGPNVPPRIPKGFVAHNHREVTTTEAVKYLSIDFTTTL
FT                   PQLMGQNLTLLTVIVRMNSMSSNGWIGMVEDYKVEQPDGPNALSRKGFLKDQPRGWQFE
FT                   PPSDLDFDTFARTHRVVIEFKTEVPAGAKVLVRDLYVVVSDLPRVQIPTDVLLVDEDLL
FT                   EI"
XX
SQ   Sequence 1861 BP; 496 A; 379 C; 488 G; 498 T; 0 other;
     gatttctctt ttacttgact aggtaccatt gaaacgaatt aaaagtccta tttctctagt        60
     aacatcccct tgtgggttta gagattgttg gttgtctatt cgtaattcca cttgttggtt       120
     gaatagtgtt tcagtatggc cggtgtcagt aaaaacccct ccactagtga tttttcagta       180
     gtggagtgtt ctatggacga aatgagccag atatcagagg atttgcataa actcatgcta       240
     tccgatgaga tgagggcgtt accaacgaaa ggttgtcata tcctgcattt agttaacctc       300
     ccgaaatcca atgtactaag attagcgagt aaggaacaga aaggtttcct ctcgcgacag       360
     gccgacaaag taaagaataa gatttacaga tgtgtaggcc gagtattcct cgtttatgta       420
     ccgattattc aggcaacgac ttcgggctta ataaccctta agttgcagaa ctccgatacg       480
     ggagaaattt cagacgtcgt gacagacgtc gaagccaatc gtgcctttgt tattatggac       540
     agatggggaa gatccctggt agagtcagca gacttgaatc tgttgtattc tatttcatgt       600
     ccggacgtcc gacctggagc cagagtggga gagatgatgg ctttttggga tgagaggatg       660
     tcgaggcagc agacttactt ggagaaaggg aatcctattt tattcccgat tgctgagaca       720
     aaaccttcga aatatcttaa tgataagaag gttttgatgt cgatggtccg aagtaggata       780
     ttggcaggta cagaagggtg cgatatagcc cccgagaata tagaagttaa acgattaggg       840
     gacaatagaa aggttttgac cattcaaccg aaagccccga ttgtagagga agttaaggac       900
     gaagatgaac cgacaggttc gaatggtgaa aatcatatgg aagagaagac tgtgaccgtt       960
     aaggtcggta gttctggaag tgcttgagtg actgtgtcac gagcgagcgc ctttgcgcga      1020
     gcgtttttct ttctttcttc cgaatttcct ttcacctaac aatggtttgc cgaatttgca      1080
     atcataccca cgctggtgga tgccgttctt gcaagaagtg ccatccgaat ggagctctgg      1140
     tcccactcag ggctcaacag agggctgcga ataacccgaa tagaaacccg aatagggctt      1200
     cgagtggtac tggaccagtg gtccgaccac aaccggtcgt gaagaccacc tggaccgtga      1260
     gaggtccgaa tgtgcctccc cgaattccta aggggtttgt agcacacaat caccgagagg      1320
     tgacgacgac agaggcagtg aagtacttga gcatagactt cacgaccact ctccctcagt      1380
     tgatgggtca gaatttgacc ctactgactg ttatagtccg aatgaactct atgagttcga      1440
     atggttggat tgggatggtg gaggactata aggtggaaca acctgatggt ccgaatgccc      1500
     tgtctaggaa ggggttcttg aaggaccaac cgagaggttg gcagttcgaa cctccttccg      1560
     atttagattt cgacactttt gcgcgtacgc atcgtgtcgt tatcgaattc aagaccgagg      1620
     tgcccgctgg ggccaaggtc ttggttaggg atttgtacgt agtggtaagt gatttaccac      1680
     gagtgcaaat tccgactgat gtcttgctgg tcgatgaaga cctgcttgag atctagagtg      1740
     agataagcac actcgaattt cctccgaatg gaaagttcgc accaccgata gtggatattg      1800
     cgaattagat ttctgaaggt cgcttcccga ctttcatgct tggaaatctt acctgcgtta      1860
     g                                                                      1861
//