ID   JN989439; SV 1; circular; genomic DNA; STD; VRL; 2557 BP.
XX
AC   JN989439;
XX
DT   20-MAR-2012 (Rel. 112, Created)
DT   17-MAY-2012 (Rel. 112, Last updated, Version 3)
XX
DE   Chickpea yellows mastrevirus isolate CpYV_AU_3489B_2002, complete genome.
XX
KW   .
XX
OS   Chickpea yellows virus
OC   Viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-2557
RX   PUBMED; 22406325.
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Kraberger S., Stainton D.,
RA   Dayaram A., Parry J.N., Pande D., Martin D.P., Varsani A.;
RT   "Molecular characterisation of dicot-infecting mastreviruses from
RT   Australia";
RL   Virus Res. 166(1-2):13-22(2012).
XX
RN   [2]
RP   1-2557
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Parry J.N., Kraberger S.,
RA   Stainton D., Dayaram A., Pande D., Martin D.P., Varsani A.;
RT   ;
RL   Submitted (03-NOV-2011) to the INSDC.
RL   School of Biological Sciences, University of Canterbury, Private Bag 4800,
RL   Christchurch 8140, New Zealand
XX
DR   MD5; 7ca207bd70337dedd1919fd9498effe3.
DR   EuropePMC; PMC4594918; 26437663.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2557
FT                   /organism="Chickpea yellows virus"
FT                   /host="Cicer arietinum (chickpea)"
FT                   /isolate="CpYV_AU_3489B_2002"
FT                   /mol_type="genomic DNA"
FT                   /country="Australia"
FT                   /lat_lon="31.59 S 148.72 E"
FT                   /collection_date="2002"
FT                   /db_xref="taxon:1162557"
FT   CDS             1..282
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:H9BAI4"
FT                   /db_xref="InterPro:IPR002621"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAI4"
FT                   /protein_id="AFD63065.1"
FT                   /translation="MARGKYQIYPPVEDHFPEVSSQVSSPGGHSTVDFGKVVVVLIVIL
FT                   VVVGLLYLSYSLFIKDCILLFKAKKQRTTTEIGFGNTPARGSSDPPHP"
FT   CDS             293..1039
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H9BAI5"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAI5"
FT                   /protein_id="AFD63064.1"
FT                   /translation="MNTSWGRKRTRTGWNKGKASNQKQGANNRRTAPPPVPRRDSLQVA
FT                   TFSWTSTGAGIKFSPGGSVYLINTYPQGANDNCRHTNSTLTYKLMTKNTVFLDANFWPY
FT                   VCKIPVVFWLVYDKSPGASVPNTGDIFDGTSIFKNNPSVWTVSRAVCHRFVVKKTWTVI
FT                   LEANGVDPTKKVSASYYGPGPCNQWKSSNKFFKRLGVSTEWKNSASGDVADIKEGALYI
FT                   VCAPSQGFDIYVNGYFRVYFKSVGNQ"
FT   CDS             complement(join(1198..1611,1701..2291))
FT                   /codon_start=1
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:H9BAI6"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAI6"
FT                   /protein_id="AFD63066.1"
FT                   /translation="MPSPSKKSPSFRLQTKYVFLTYPHCSSSAEGLRDFLWDKLSRFAI
FT                   FFIAIATELLPAHLHCLLQLDKRSNIRDPSFFDFEGNHPNIQPAKNSEQVLDYISKDEN
FT                   VITKGEFRKHKVSPTKTDERWRNIINTATSKEEYLGMIKEEFPHEWATKLQWLEYSANK
FT                   LFPEIEPPYQSPFTSCSLQCHEKITDWLNRDLYLEPEQLRHRRRSLYICGPTRTGKTSW
FT                   ARSLGLHNYFNGGVDFTTYNPLATYNIIDDIPFKFCPNWKQLIGSQLDFTVNPKYGKKR
FT                   RIKGGIPCIILVNNDDDWMNDMSPAQNDYFQANCCIHYMEEGETFIALQSSSH"
FT   CDS             complement(1470..2291)
FT                   /codon_start=1
FT                   /product="RepA protein"
FT                   /db_xref="GOA:H9BAI7"
FT                   /db_xref="InterPro:IPR001146"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAI7"
FT                   /protein_id="AFD63063.1"
FT                   /translation="MPSPSKKSPSFRLQTKYVFLTYPHCSSSAEGLRDFLWDKLSRFAI
FT                   FFIAIATELLPAHLHCLLQLDKRSNIRDPSFFDFEGNHPNIQPAKNSEQVLDYISKDEN
FT                   VITKGEFRKHKVSPTKTDERWRNIINTATSKEEYLGMIKEEFPHEWATKLQWLEYSANK
FT                   LFPEIEPPYQSPFTSCSLQCHEKITDWLNRDLYLVSLDAYQLVHPHLDCLSAVNDLFWM
FT                   ADYTRNQSSSDTEEEVSTYVDQQEQGRPVGPEASDCTTTSTEELTSPPTTP"
XX
SQ   Sequence 2557 BP; 715 A; 451 C; 588 G; 803 T; 0 other;
     atggcaaggg gaaaatacca aatataccct ccggtggaag atcatttccc agaagtgtcc        60
     tcgcaggttt cttctcctgg tggacattct acagttgatt ttggtaaggt tgttgtcgtg       120
     ctgattgtga tacttgtcgt agtgggtttg ttgtatctgt cttattcgtt gttcattaaa       180
     gattgtattt tgctttttaa agcgaaaaag cagagaacaa ccaccgaaat cgggtttgga       240
     aacacccctg ctcgaggtag ctcagatcct cctcaccctt aggtcaagca ctatgaatac       300
     ttcgtgggga aggaagagaa cccgtactgg atggaataaa gggaaggcgt caaatcagaa       360
     acagggtgcc aataatagaa ggacagctcc ccctcctgtt ccaaggaggg attcgctaca       420
     ggtggctacg tttagttgga ccagtacagg ggcaggtata aagttttctc ctggtgggtc       480
     tgtttatttg ataaacactt atccacaggg agcgaatgac aattgtcgtc acaccaacag       540
     caccttgacg tacaagttga tgactaaaaa tactgtattt ttggatgcca atttttggcc       600
     gtatgtttgt aaaatacctg tggtattttg gttggtgtac gacaagtcac caggggcttc       660
     tgtacctaac acaggtgata tatttgatgg gacgtctatt tttaagaaca atcctagtgt       720
     gtggacagtg tccagagctg tctgtcatag gtttgttgtg aagaagacct ggacagtcat       780
     attggaggcc aatggtgttg atccaaccaa gaaggtgtca gctagttatt atggtccggg       840
     gccttgcaac cagtggaagt cgtcaaataa gtttttcaag agacttggtg tctcaactga       900
     atggaaaaat agtgctagtg gggatgtggc agacataaaa gaaggtgcac tctatattgt       960
     ttgtgcacct tctcagggtt ttgatatata tgtaaatggt tatttccgag tgtactttaa      1020
     gtctgttggt aatcaataaa aacatttatt taatgtttag atgtcatatt tatgagcttc      1080
     aatatagaga aattttattc attaataaat cacactcaaa tacattacaa acttttacaa      1140
     caaaattaac aacccagtac attaatctta tattccctcg attgaggaga ggcacgttta      1200
     gtgactcgac gattgaagag caataaatgt ttccccctct tccatgtaat gaatacaaca      1260
     attagcttga aagtaatcat tttgagctgg ggacatatcg ttcatccaat catcatcatt      1320
     attgactaat attatacatg gtattccccc tttgatcctt ctttttttcc catatttagg      1380
     attcacagtg aaatctaact gtgaacctat taattgtttc cagttgggac agaatttaaa      1440
     ggggatatca tctattatat tatatgttgc taaggggttg taggtggtga agtcaactcc      1500
     tccgttgaag tagttgtgca gtccgaggct tctggcccaa ctggtcttcc ctgttcttgt      1560
     tggtccacat atgtagagac ttcttcttcg gtgtctgagc tgctctggtt cctggtgtaa      1620
     tcagccatcc aaaacaaatc attaactgca cttagacaat ctaagtgtgg atggactaat      1680
     tgatatgcat caagacttac taggtataag tctctattta gccagtcagt gattttttca      1740
     tgacactgga gggagcagga ggtgaatggg ctttgatatg gtggttcaat ttcagggaat      1800
     agtttattgg cgctatattc tagccattgg agttttgttg cccattcgtg tgggaattcc      1860
     tccttaatca tccccagata ctcctcctta gatgttgcag tgttgatgat atttctccat      1920
     cgttcatcag tttttgtggg ggagaccttg tgttttctga attctccctt ggtgatgacg      1980
     ttttcgtcct tagatatgta atcaaggact tgttcagagt ttttagctgg ttggatatta      2040
     gggtgatttc cttcaaaatc aaaaaaagaa gggtcacgta tgttagatct tttgtcaagt      2100
     tgtaacaggc agtgaagatg tgcgggtaag agctcagtag caatagcgat gaaaaaaata      2160
     gcaaaacgtg agagtttatc ccagagaaag tctctgagac cttctgcaga agagctgcag      2220
     tggggatatg taaggaaaac atattttgtt tgaagtctga atgaagggga tttcttcgag      2280
     ggtgaaggca tgttatggct catacagtgt ttcacaaact ctatgcttaa ccagtgagtg      2340
     agccagtgag ttatataaat aacgttttgc tttccaataa aaaaacgaca cctgtggaga      2400
     caggcacacg tgaaagcact cactgaaatt taatattacc agtgagtgct ttacacgtgt      2460
     cgcgagccga taggcgagcg taaaggttac ttttgaaaaa ggaagattcc cgcccaataa      2520
     ttcaattata aatagacggg tgttttggca tgtagtg                               2557
//