ID   JN989438; SV 1; circular; genomic DNA; STD; VRL; 2590 BP.
XX
AC   JN989438;
XX
DT   20-MAR-2012 (Rel. 112, Created)
DT   17-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Chickpea chlorosis virus-E isolate CpCV-E_AU_84_1984, complete genome.
XX
KW   .
XX
OS   Chickpea chlorosis virus-E
OC   Viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-2590
RX   PUBMED; 22406325.
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Kraberger S., Stainton D.,
RA   Dayaram A., Parry J.N., Pande D., Martin D.P., Varsani A.;
RT   "Molecular characterisation of dicot-infecting mastreviruses from
RT   Australia";
RL   Virus Res. 166(1-2):13-22(2012).
XX
RN   [2]
RP   1-2590
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Parry J.N., Kraberger S.,
RA   Stainton D., Dayaram A., Pande D., Martin D.P., Varsani A.;
RT   ;
RL   Submitted (03-NOV-2011) to the INSDC.
RL   School of Biological Sciences, University of Canterbury, Private Bag 4800,
RL   Christchurch 8140, New Zealand
XX
DR   MD5; 58d1e42d2008a2446356fe139e4d727f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2590
FT                   /organism="Chickpea chlorosis virus-E"
FT                   /host="bean"
FT                   /isolate="CpCV-E_AU_84_1984"
FT                   /mol_type="genomic DNA"
FT                   /country="Australia"
FT                   /lat_lon="34.44 S 116.06 E"
FT                   /collection_date="1984"
FT                   /db_xref="taxon:1162556"
FT   CDS             1..309
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:H9BAE0"
FT                   /db_xref="InterPro:IPR002621"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAE0"
FT                   /protein_id="AFD63060.1"
FT                   /translation="MFPSLYQIFPSEENYSYTPVQTQESFSGAKAGDSSEHVFSKVVVA
FT                   LIIILFSVGIIYLAYTLFLKDLILLLKAKKQRTTTEIGFGNTPARPGSQPQQNGGPI"
FT   CDS             293..1057
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H9BAE9"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAE9"
FT                   /protein_id="AFD63061.1"
FT                   /translation="MAGRFKGQVYSRKRGRNAKVYQALGVKSQRELEQLVNQPGRPVPN
FT                   RRPSLQVAEYLWTTNKAGVTFSPGGGTYLFTNYPQGANENCRHTNRTITYKMAIKCWVA
FT                   LDGSMVARVAKFPVHFWLVYDKNPGDTNPSPSAIFDSLYQDQPGTWTVTRNVCHRFVVK
FT                   KSWSVMLESNGIDPSKSQSTSYYGPGPCNNWRHMTKFFKRLGVSTEWKNSSTGDVADIK
FT                   EGALYLVCAPSGGATIKVGGRFRMYFKSVGNQ"
FT   CDS             complement(join(1220..1633,1723..2322))
FT                   /codon_start=1
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:H9BAI2"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAI2"
FT                   /protein_id="AFD63062.1"
FT                   /translation="MPSSSTRQNNFRLQTKYVFLTYPHCSSTATSLRDFLWEKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRGDIRDPSFFDFEGNHPNIQPAKNSEQVLDYISK
FT                   DGNVITRGDFRKHKVSPTKHDERWRNIIQTATTKEEYLGMIRDQFPHEWATKLQWLEYS
FT                   ANKLFPDIEPPYENPFSPIDLQCHEEIQEWLNRDLYVEPEQLQHRRNSLYICGPTRTGK
FT                   TSWARSLGRHNYFNGGVDFTTYDTNATYNIIDDIPFKFCPNWKQLVGSQKDFTVNPKYG
FT                   KKKRIKGGIPCIILVNNDDDWLLDMSSSQKEYFESNCKIHYMDSEETFIASNASSH"
FT   CDS             complement(1432..2322)
FT                   /codon_start=1
FT                   /product="RepA protein"
FT                   /db_xref="GOA:H9BAI3"
FT                   /db_xref="InterPro:IPR001146"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAI3"
FT                   /protein_id="AFD63059.1"
FT                   /translation="MPSSSTRQNNFRLQTKYVFLTYPHCSSTATSLRDFLWEKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRGDIRDPSFFDFEGNHPNIQPAKNSEQVLDYISK
FT                   DGNVITRGDFRKHKVSPTKHDERWRNIIQTATTKEEYLGMIRDQFPHEWATKLQWLEYS
FT                   ANKLFPDIEPPYENPFSPIDLQCHEEIQEWLNRDLYVVSVDAYTLIHPNINYQTATEDL
FT                   IWMDHFTRNPNNSNTEGTPSTSADQLVPERPAGLAVSADTTTSTEEWTSPRTTLTPPTI
FT                   SSTTSPSSSAQTGSN"
XX
SQ   Sequence 2590 BP; 713 A; 484 C; 633 G; 760 T; 0 other;
     atgtttccgt ccctttatca aatattccct tctgaggaga attactcgta tacccctgtt        60
     cagacgcagg agtcgttttc tggtgcgaaa gcaggtgatt catccgagca cgtcttctcc       120
     aaagtcgtcg ttgcgttaat tattattctt ttttcagtgg gaatcattta tcttgcgtat       180
     actctatttt taaaagattt gatattatta ttaaaggcga aaaagcagag gacgacgaca       240
     gagatagggt ttggtaatac ccctgctaga cccggttctc aacctcagca aaatggcggg       300
     ccgatttaag ggacaggtgt acagcaggaa acggggtcgt aatgcaaagg tgtatcaggc       360
     tttgggagtt aaatctcagc gggagttgga gcagttagtt aaccaaccag gacgtcctgt       420
     tccgaacaga cgtccgtcat tgcaggtcgc agagtatctg tggacgacca acaaggctgg       480
     tgtgacgttt tcgcctggtg ggggaacgta tttgttcact aattaccctc aaggggcgaa       540
     cgagaactgc aggcacacta accggaccat aacgtacaag atggctatca agtgttgggt       600
     tgccctggat gggtctatgg tggctagggt tgcaaagttc ccagtccatt tctggttagt       660
     gtacgacaag aaccctggtg atacgaatcc ttctccatcg gctatttttg atagtctcta       720
     tcaagatcag cctgggactt ggactgtaac gaggaatgtg tgtcataggt tcgttgttaa       780
     aaagtcttgg tccgtgatgc tggagtccaa tgggattgat cccagtaagt ctcagtccac       840
     atcatattat gggcctgggc cttgtaataa ttggaggcac atgaccaaat tttttaaacg       900
     tttaggagtt agtacagagt ggaagaattc ttccactggt gatgtagctg atattaaaga       960
     gggagcacta tatcttgtat gtgctccgtc aggtggtgca accattaagg ttgggggtcg      1020
     atttcgaatg tattttaaat ccgttggtaa tcaataaata aaatatattt ctcttatgat      1080
     tttatattaa taagattcaa tattgagaac aaaaattcat tagcatcgaa atccaataca      1140
     aaaataacac accagaaaaa aaaacaaaac ccaaacaaca atacactata tgtatacttc      1200
     aaacgaagga gaggcacgtt cagtgactcg acgcatttga agcaataaat gtctcctctg      1260
     aatccatgta atggatctta cagttggatt caaagtattc cttctgagag gaagacatat      1320
     ctaataacca gtcgtcgtca ttattaacta atataataca tggtattccc cctttgatcc      1380
     tcttcttttt gccgtatttt gggtttacgg tgaagtcctt ctgcgatccc actaattgct      1440
     tccagtttgg gcagaacttg aaggggatgt cgtcgatgat attgtaggtg gcgttagtgt      1500
     cgtacgtggt gaagtccact cctccgttga agtagttgtg tctgccgaga ctgcgagccc      1560
     agctggtctt tccggtacga gttggtccgc agatgtagag ggagttcctt cggtgttgga      1620
     gttgttcggg ttcctggtaa aatggtccat ccatatcaaa tcttcagttg ctgtttggta      1680
     attgatattt ggatgaatta aagtgtaagc atcgacgctt accacgtaca ggtctctgtt      1740
     cagccactcc tgtatttctt cgtggcactg aagatcaatg ggggagaagg ggttttcata      1800
     tggaggctct atatctggga acagtttatt ggcgctatat tcaagccatt gtagtttggt      1860
     cgcccattca tgagggaact gatccctaat cattcccaaa tactcctcct tagttgttgc      1920
     agtttggata atatttcgcc atcgttcatc atgtttagta ggggagacct tgtgttttcg      1980
     aaagtctcct ctcgtgatga cgtttccatc ctttgatatg taatcaagga cttgttcaga      2040
     atttttagct ggttggatat ttggatgatt tccttcaaaa tcaaaaaaag aagggtcacg      2100
     tatatcccct cttttatcaa gctgaagaag acagtgaaga tggggagtac catcttgatg      2160
     tagctcagta gcaacagcaa taaagaaaat agcaaaacgt gagagttttt cccagagaaa      2220
     gtctctgagg cttgttgcag tagagctgca atggggataa gtaagaaaaa catatttggt      2280
     ttgaagacgg aagttgtttt ggcgtgttga agaagaaggc attatttagg ctttcctcaa      2340
     acagtgtttt ggaaactcta tcttaaccag cgagtgagga aaatgaggaa ggggagtgag      2400
     gtatttattt gaattgaggg cgaatagccc gctgacacgt ggggcgcact cgcggaattt      2460
     aatgttaccc gcgagtgcct ggccccacgc gagcacgtta gtgcgagcga taatgcgagg      2520
     aaaaagcata agtcctcatg aggaaaagtt agtgctatat aaagatgatg tgacattaag      2580
     agagagaaca                                                             2590
//