ID   JN989435; SV 1; circular; genomic DNA; STD; VRL; 2587 BP.
XX
AC   JN989435;
XX
DT   20-MAR-2012 (Rel. 112, Created)
DT   17-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Chickpea chlorosis virus-E isolate CpCV-E_AU_3498Ea_2002, complete genome.
XX
KW   .
XX
OS   Chickpea chlorosis virus-E
OC   Viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-2587
RX   PUBMED; 22406325.
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Kraberger S., Stainton D.,
RA   Dayaram A., Parry J.N., Pande D., Martin D.P., Varsani A.;
RT   "Molecular characterisation of dicot-infecting mastreviruses from
RT   Australia";
RL   Virus Res. 166(1-2):13-22(2012).
XX
RN   [2]
RP   1-2587
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Parry J.N., Kraberger S.,
RA   Stainton D., Dayaram A., Pande D., Martin D.P., Varsani A.;
RT   ;
RL   Submitted (03-NOV-2011) to the INSDC.
RL   School of Biological Sciences, University of Canterbury, Private Bag 4800,
RL   Christchurch 8140, New Zealand
XX
DR   MD5; 6ae49b64eff7cf09d64aa3b349a8a0da.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2587
FT                   /organism="Chickpea chlorosis virus-E"
FT                   /host="Cicer arietinum (chickpea)"
FT                   /isolate="CpCV-E_AU_3498Ea_2002"
FT                   /mol_type="genomic DNA"
FT                   /country="Australia"
FT                   /lat_lon="31.18 S 150.43 E"
FT                   /collection_date="2002"
FT                   /db_xref="taxon:1162556"
FT   CDS             1..309
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:H9BAE0"
FT                   /db_xref="InterPro:IPR002621"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAE0"
FT                   /protein_id="AFD63049.1"
FT                   /translation="MFPSLYQIFPSEENYSYTPVQTQESFSGAKAGDSSEHVFSKVVVA
FT                   LIIILFSVGIIYLAYTLFLKDLILLLKAKKQRTTTEIGFGNTPARPGSQPQQNGGPI"
FT   CDS             293..1057
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H9BAE9"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAE9"
FT                   /protein_id="AFD63048.1"
FT                   /translation="MAGRFKGQVYSRKRGRNAKVYQALGVKSQRELEQLVNQPGRPVPN
FT                   RRPSLQVAEYLWTTNKAGVTFSPGGGTYLFTNYPQGANENCRHTNRTITYKMAIKCWVA
FT                   LDGSMVARVAKFPVHFWLVYDKNPGDTNPSPSAIFDSLYQDQPGTWTVTRNVCHRFVVK
FT                   KSWSVMLESNGIDPSKSQSTSYYGPGPCNNWRHMTKFFKRLGVSTEWKNSSTGDVADIK
FT                   EGALYLVCAPSGGATIKVGGRFRMYFKSVGNQ"
FT   CDS             complement(join(1219..1632,1722..2321))
FT                   /codon_start=1
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:H9BAH0"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAH0"
FT                   /protein_id="AFD63050.1"
FT                   /translation="MPSSSTRQNNFRLQTKYVFLTYPHCSSTATSLRDFLWDKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRGDIRDPSFFDFEGNHPNIQPAKNSEQVLDYISK
FT                   DGNVITRGDFRKHKVSPTKHHERWRNIIQTATTKEEYLGMIRDQFPHEWATKLQWLEYS
FT                   ANKLFPDIEPPYENPFSPIDLQCHEEIQEWLNRDLYVEPEQLQHRRNSLYICGPNRTGK
FT                   TTWARSLGRHNYFNGGVDFTTYDTNATYNIIDDIPFKFCPNWKQLVGSQKDFTVNPKYG
FT                   KKKRIKGGIPCIILVNNDDDWLSDMSSSQKEYFESNCKIHYMDSEETFIASNASSH"
FT   CDS             complement(1431..2321)
FT                   /codon_start=1
FT                   /product="RepA protein"
FT                   /db_xref="GOA:H9BAH1"
FT                   /db_xref="InterPro:IPR001146"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAH1"
FT                   /protein_id="AFD63047.1"
FT                   /translation="MPSSSTRQNNFRLQTKYVFLTYPHCSSTATSLRDFLWDKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRGDIRDPSFFDFEGNHPNIQPAKNSEQVLDYISK
FT                   DGNVITRGDFRKHKVSPTKHHERWRNIIQTATTKEEYLGMIRDQFPHEWATKLQWLEYS
FT                   ANKLFPDIEPPYENPFSPIDLQCHEEIQEWLNRDLYVVSVDAYTLIHPNINYQTATEDL
FT                   IWMDHFTRNPNNSNTEGTPSTSADQIVPVRPLGLAVSADTTTLTEEWTSPRTTLTPPTI
FT                   SSTTSPSSSAQTGSN"
XX
SQ   Sequence 2587 BP; 708 A; 482 C; 635 G; 762 T; 0 other;
     atgtttcctt ccctttatca aatattccct tctgaggaga attactctta tacccctgtt        60
     cagacgcagg agtctttttc tggtgcgaaa gcaggtgatt catccgagca cgtcttctcc       120
     aaagtcgtcg ttgctttaat tattattctt ttctcagtgg gaatcattta tcttgcgtat       180
     actttatttt taaaagattt gatattatta ttaaaggcga aaaagcagag gactacgaca       240
     gagatagggt ttggtaatac ccctgctaga cccggttctc aacctcagca aaatggcggg       300
     ccgatttaag ggacaggtgt acagcaggaa acggggtcgt aatgcaaagg tgtatcaggc       360
     tttgggagtt aaatctcagc gggagttgga gcagttagtt aaccaaccag gacgtcctgt       420
     tccgaacaga cgtccgtcat tgcaggtcgc agagtatctg tggacgacca acaaggctgg       480
     tgtgacgttt tcgcctggtg ggggaacgta tttgttcact aattaccctc aaggggcgaa       540
     cgagaactgc aggcacacta accggaccat aacgtacaag atggcgatca agtgttgggt       600
     tgccctggat gggtctatgg tggctagggt tgcaaagttc ccagtccatt tctggttagt       660
     gtacgacaag aaccctggtg atacgaatcc ttctccatcg gctatttttg atagtctcta       720
     tcaagatcag cctgggactt ggactgtaac gaggaatgtg tgtcataggt tcgttgttaa       780
     aaagtcttgg tccgtgatgc tggagtccaa tgggattgat cccagtaagt ctcagtccac       840
     atcatattat gggcctgggc cttgtaataa ttggaggcac atgaccaaat tttttaaacg       900
     tttaggagtt agtacagagt ggaagaattc ttccactggt gatgtagctg atattaaaga       960
     gggagcacta tatcttgtat gtgctccgtc aggtggtgca accattaagg ttgggggtcg      1020
     atttcgaatg tattttaaat ccgttggtaa tcaataaata aaatatattt ctcttatgat      1080
     tttatattaa taagattcaa tattgagaac aaaaattcat tagcatcgaa atccaataca      1140
     aaaaaaccac accagaaaaa aagcaaaacc caaacaacat tacactatat gtatacttca      1200
     aacgaaggag aggcacgttt agtgactcga cgcatttgaa gcaataaatg tctcctctga      1260
     atccatgtaa tggatcttgc agttggattc aaagtattcc ttctgagagg aagacatatc      1320
     tgataaccag tcgtcgtcat tattaactaa tataatacat ggtattcccc ctttgatcct      1380
     cttctttttg ccgtattttg ggtttacggt gaagtccttc tgcgatccca ctaattgctt      1440
     ccagtttggg cagaacttga aggggatgtc gtcgatgata ttgtaggtgg cgttagtgtc      1500
     gtacgtggtg aagtccactc ctccgttaaa gtagttgtgt ctgccgagac tgcgagccca      1560
     agtggtctta ccggtacgat ttggtccgca gatgtagagg gagttccttc ggtgttggag      1620
     ttgttcgggt tcctggtaaa atggtccatc catatcaaat cttcagttgc tgtttggtaa      1680
     ttgatatttg gatgaattaa agtgtaagca tcgacgctta ccacgtacag gtctctgttc      1740
     agccactcct gtatttcttc gtggcactga agatcaatgg gggagaaggg gttttcatat      1800
     ggaggctcta tatctgggaa cagtttattg gcgctatatt caagccattg taatttggtc      1860
     gcccattcat gagggaactg atccctaatc atgcccaaat attcctcctt agttgttgca      1920
     gtctggataa tatttcgcca tcgttcatga tgtttagtag gggagacctt gtgttttcga      1980
     aagtctcctc tcgtgatgac gtttccgtcc tttgatatgt aatcaaggac ttgttcagaa      2040
     tttttagctg gttggatatt tggatggttt ccttcaaaat caaaaaaaga agggtcacgt      2100
     atatcccctc ttttatcaag ctgaagaaga cagtgaagat ggggagtacc atcttgatgg      2160
     agctcagtag caacagcaat aaagaaaata gcaaaacgtg agagtttgtc ccagagaaag      2220
     tctctgaggc ttgttgcagt agagctgcaa tggggataag taaggaaaac atatttggtt      2280
     tgaagacgga agttgttttg gcgtgttgaa gaagaaggca ttatttaggc tttcctcaaa      2340
     cagtgttttg caaactctat cttaaccagc gagtgagaaa tgaggaaggg gagtgaggta      2400
     tttatttgaa ttgagggcga atagcccgct gacacgtggg gcgcactcgc gggatttaat      2460
     gttacccgcg agtgcctggc accacgcgag cacgttagtg cgagcgataa tgcgaggaaa      2520
     aagcataagt cctcatgagg aaaagttagt gctatataaa gatgatgtga cattaagaga      2580
     gagaaca                                                                2587
//