ID   JN989433; SV 1; circular; genomic DNA; STD; VRL; 2589 BP.
XX
AC   JN989433;
XX
DT   20-MAR-2012 (Rel. 112, Created)
DT   17-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Chickpea chlorosis virus-E isolate CpCV-E_AU_3495Mb_2002, complete genome.
XX
KW   .
XX
OS   Chickpea chlorosis virus-E
OC   Viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-2589
RX   PUBMED; 22406325.
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Kraberger S., Stainton D.,
RA   Dayaram A., Parry J.N., Pande D., Martin D.P., Varsani A.;
RT   "Molecular characterisation of dicot-infecting mastreviruses from
RT   Australia";
RL   Virus Res. 166(1-2):13-22(2012).
XX
RN   [2]
RP   1-2589
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Parry J.N., Kraberger S.,
RA   Stainton D., Dayaram A., Pande D., Martin D.P., Varsani A.;
RT   ;
RL   Submitted (03-NOV-2011) to the INSDC.
RL   School of Biological Sciences, University of Canterbury, Private Bag 4800,
RL   Christchurch 8140, New Zealand
XX
DR   MD5; d6679e3fb68ee5a018068c229e2d0d73.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2589
FT                   /organism="Chickpea chlorosis virus-E"
FT                   /host="Cicer arietinum (chickpea)"
FT                   /isolate="CpCV-E_AU_3495Mb_2002"
FT                   /mol_type="genomic DNA"
FT                   /country="Australia"
FT                   /lat_lon="31.67 S 148.08 E"
FT                   /collection_date="2002"
FT                   /db_xref="taxon:1162556"
FT   CDS             1..309
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:H9BAE0"
FT                   /db_xref="InterPro:IPR002621"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAE0"
FT                   /protein_id="AFD63041.1"
FT                   /translation="MFPSLYQIFPSEENYSYTPVQTQESFSGAKAGDSSEHVFSKVVVA
FT                   LIIILFSVGIIYLAYTLFLKDLILLLKAKKQRTTTEIGFGNTPARPGSQPQQNGGPI"
FT   CDS             293..1057
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H9BAG1"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAG1"
FT                   /protein_id="AFD63042.1"
FT                   /translation="MAGRFKGQVYSRKRGRNAKVYQALGVKSQRELEQLVNQPGRPVPN
FT                   RRPSLQVAEYLWTTNKAGVTFSPGGGTYLFTNYPQGANENCRHTNRTITYKMDIKCWVA
FT                   LDGSMVARVAKFPVHFWLVYDKNPGDTNPSPSAIFDSLYQDQPGTWTVTRNVCHRFVVK
FT                   KSWSVMLESNGIDPSKSQSTSYYGPGPCNNWRHMTKFFKRLGVSTEWKNSSTGDVADIK
FT                   EGALYLVCAPSGGATIKVGGRFRMYFKSVGNQ"
FT   CDS             complement(join(1219..1632,1722..2321))
FT                   /codon_start=1
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:H9BAF8"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAF8"
FT                   /protein_id="AFD63039.1"
FT                   /translation="MPSSSTRQNNFRLQTKYVFLTYPHCSSTATSLRDFLWEKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRGDIRDPSFFDFEGNHPNIQPAKNSEQVLDYISK
FT                   DGNVITRGDFRKHKVSPTKHDERWRNIIQTATTKEEYLGMIRDQFPHEWATKLQWLEYS
FT                   ANKLFPDIEPPYENPFSPIDLQCHEEIQEWLNRDLYVEPEQLQHRRNSLYICGPTRTGK
FT                   TSWARSLGRHNYFNGGVDFTTYDTKATYNIIDDIPFKFCPNWKQLVGSQKDFTVNPKYG
FT                   KKKRIKGGIPCIILVNNDDDWLLDMSSSQKEYFESNCKIHYMNSEETFIASNASSH"
FT   CDS             complement(1431..2321)
FT                   /codon_start=1
FT                   /product="RepA protein"
FT                   /db_xref="GOA:H9BAF9"
FT                   /db_xref="InterPro:IPR001146"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAF9"
FT                   /protein_id="AFD63040.1"
FT                   /translation="MPSSSTRQNNFRLQTKYVFLTYPHCSSTATSLRDFLWEKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRGDIRDPSFFDFEGNHPNIQPAKNSEQVLDYISK
FT                   DGNVITRGDFRKHKVSPTKHDERWRNIIQTATTKEEYLGMIRDQFPHEWATKLQWLEYS
FT                   ANKLFPDIEPPYENPFSPIDLQCHEEIQEWLNRDLYVVSVDAYTLIHPNINYQTATEDL
FT                   IWMDHFTRNPNNSNTEGTPSTSADQLVPERPAGLAVSEDTTTLTEEWTSPRTTLRPPTI
FT                   SSTTSPSSSAQTGSN"
XX
SQ   Sequence 2589 BP; 711 A; 483 C; 633 G; 762 T; 0 other;
     atgtttccct ccctttatca aatattccct tctgaggaga attactcgta tacccctgtt        60
     cagacgcagg agtcgttttc tggtgcgaaa gcaggtgatt catccgagca cgttttctcc       120
     aaagtcgtcg ttgcgttaat tattattctt ttttcagtgg gaatcattta tcttgcgtat       180
     actttatttt taaaagattt gatattatta ttaaaggcga aaaagcagag gactacgaca       240
     gagatagggt ttggtaatac ccctgctaga cccggttctc aacctcagca aaatggcggg       300
     ccgatttaag ggacaggtgt acagcaggaa acggggtcgt aatgcaaagg tgtatcaggc       360
     tttgggagtt aaatctcagc gggagttgga gcagttagtt aaccaaccag gacgtcctgt       420
     tccgaacaga cgtccgtcat tgcaggtcgc agagtatctg tggacgacca acaaagctgg       480
     tgtgacgttt tcgcctggtg ggggaacgta tttgttcact aattaccctc aaggggcgaa       540
     cgagaactgc aggcacacta accggaccat aacgtacaag atggatatca agtgttgggt       600
     tgccctggat ggttctatgg tggctagggt tgcgaagttc ccagtccatt tctggttagt       660
     gtacgacaag aaccctggtg atacgaatcc ttctccatcg gctatttttg atagtctcta       720
     tcaagatcag cctgggactt ggactgtaac gaggaatgtg tgtcataggt tcgtcgttaa       780
     aaagtcttgg tccgtgatgc tggagtccaa tgggattgat cccagtaagt ctcagtccac       840
     atcatattat gggcctgggc cttgtaataa ttggaggcac atgaccaaat tttttaagcg       900
     tttaggagtt agtacagagt ggaagaactc ttccactggt gatgtagctg atattaaaga       960
     gggagcacta tatcttgtat gtgctccgtc aggtggtgca accattaagg ttgggggtcg      1020
     atttcgaatg tattttaaat ccgttggtaa tcaataaata aaatatattt ctcttatgat      1080
     tttatattaa taagattcaa tattgagaac aaaaattcat tagcatcgaa atccaataca      1140
     aaaaaacaca ccagaaaaaa aagcaaaacc caaacaacaa tacactatat gtatacttca      1200
     aacgaaggag aggcacgttc agtgactcga cgcatttgaa gcaataaatg tctcctctga      1260
     attcatgtaa tggatcttgc agttggattc aaagtattcc ttctgagagg aagacatatc      1320
     taataaccag tcgtcgtcat tattaactaa tataatacat ggtattcccc ctttgatcct      1380
     cttctttttg ccgtattttg ggtttacggt gaagtctttc tgcgagccca ctaattgctt      1440
     ccagtttggg cagaacttga aggggatgtc gtcgatgata ttgtaggtgg ccttagtgtc      1500
     gtacgtggtg aagtccactc ctccgttaaa gtagttgtgt cttccgagac tgcgagccca      1560
     gctggtcttt ccggtacgag ttggtccgca gatgtagagg gagttccttc ggtgttggag      1620
     ttgttcgggt tccttgtaaa atggtccatc catatcaaat cttcagttgc tgtttggtaa      1680
     ttgatatttg gatgaattaa agtgtaggca tcgacgctta ccacgtacag gtctctgttc      1740
     agccactcct gtatttcttc gtggcactga agatcaatgg gggagaaggg gttttcatat      1800
     ggaggctcta tatctgggaa cagtttattg gcgctatatt caagccattg tagtttggtc      1860
     gcccattcat gagggaactg atccctaatc atgcccaaat attcctcctt agttgttgca      1920
     gtctggataa tatttcgcca tcgttcatca tgtttagtag gggagacctt gtgttttcga      1980
     aagtctcctc tcgtgataac gtttccatcc tttgatatgt aatcaaggac ttgttcagaa      2040
     tttttagctg gttggatatt tggatgattt ccttcaaaat caaaaaaaga agggtcacgt      2100
     atatcccctc ttttatcaag ctgaagaaga cagtgaagat ggggagtacc atcttgatgt      2160
     agctcagtag caacagcaat gaagaaaata gcaaaacgtg agagtttttc ccagagaaag      2220
     tctctgaggc ttgttgcagt agagctgcaa tggggataag taagaaaaac atatttggtt      2280
     tgaagacgga agttgttttg gcgtgttgaa gaagaaggca ttatttaggc tttcctcaaa      2340
     cagtgttttg gaaactctat cttaaccagc gagtgaggaa aatgaggaag gggagtgagg      2400
     tatttatttg aattgagggc gaatagcccg ctgacacgtg gggcgcactc gcggaattta      2460
     atgttacccg cgagtgcctg gccccacgcg agcacgttag tgcgagcgat aatgcgagga      2520
     aaaagcataa gtccgcatga ggaaaagtta gtgctatata aagatgatgt gacattaaga      2580
     gagagaaca                                                              2589
//