ID   JN989427; SV 1; circular; genomic DNA; STD; VRL; 2594 BP.
XX
AC   JN989427;
XX
DT   20-MAR-2012 (Rel. 112, Created)
DT   17-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Chickpea chlorosis virus-E isolate CpCV-E_AU_3487H_2002, complete genome.
XX
KW   .
XX
OS   Chickpea chlorosis virus-E
OC   Viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-2594
RX   PUBMED; 22406325.
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Kraberger S., Stainton D.,
RA   Dayaram A., Parry J.N., Pande D., Martin D.P., Varsani A.;
RT   "Molecular characterisation of dicot-infecting mastreviruses from
RT   Australia";
RL   Virus Res. 166(1-2):13-22(2012).
XX
RN   [2]
RP   1-2594
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Parry J.N., Kraberger S.,
RA   Stainton D., Dayaram A., Pande D., Martin D.P., Varsani A.;
RT   ;
RL   Submitted (03-NOV-2011) to the INSDC.
RL   School of Biological Sciences, University of Canterbury, Private Bag 4800,
RL   Christchurch 8140, New Zealand
XX
DR   MD5; ac9fe13cb5beafd1a1e344fff14067ae.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2594
FT                   /organism="Chickpea chlorosis virus-E"
FT                   /host="Cicer arietinum (chickpea)"
FT                   /isolate="CpCV-E_AU_3487H_2002"
FT                   /mol_type="genomic DNA"
FT                   /country="Australia"
FT                   /lat_lon="31.84 S 148.31 E"
FT                   /collection_date="2002"
FT                   /db_xref="taxon:1162556"
FT   CDS             1..309
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:H9BAE0"
FT                   /db_xref="InterPro:IPR002621"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAE0"
FT                   /protein_id="AFD63016.1"
FT                   /translation="MFPSLYQIFPSEENYSYTPVQTQESFSGAKAGDSSEHVFSKVVVA
FT                   LIIILFSVGIIYLAYTLFLKDLILLLKAKKQRTTTEIGFGNTPARPGSQPQQNGGPI"
FT   CDS             293..1057
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H9BAD7"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAD7"
FT                   /protein_id="AFD63017.1"
FT                   /translation="MAGRFKGQVYSRKRGRNAKVYQALGVKSQRELEQLVNQPGRPVPN
FT                   RRPSLQVAEYLWTTNKAGVTFSPGGGTYLFTNYPQGANENCRHTNRTITYKMAIKCWVA
FT                   LDGSMVARVAKFPVHFWLVYDKNPGDTNPLPSAIFDSLYQDQPGTWTVTRNVCHRFVVK
FT                   KSWSVMLESNGIDPSKSQSTSYYGPGPCNNWRHMTKFFKRLGVSTEWKNSSTGDVADIK
FT                   EGALYLVCAPSGGATIKVGGRFRMYFKSVGNQ"
FT   CDS             complement(join(1220..1633,1723..2322))
FT                   /codon_start=1
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:H9BAD8"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAD8"
FT                   /protein_id="AFD63018.1"
FT                   /translation="MPSSSTRQNNFRLQTKYVFLTYPHCSSTATSLRDFLWDKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRGDIRDPSFFDFEGNHPNIQPAKNSEQVLDYISK
FT                   DGNVITRGDFRKHKVSPTKHDERWRNIIQTATTKEEYLGMIRDQFPHEWATKLQWLEYS
FT                   ANKLFPDIEPPYENPFSPIDLQCHEEIQEWLNRDLYVEPEQLQHRRNSLYICGPTRTGK
FT                   TSWARSLGRHNYFNGGVDFTTYDTNATYNIIDDIPFKFCPNWKQLVGSQKEFTVNPKYG
FT                   KKKRIKGGIPCIILVNNDDDWLSDMSSSQKEYFESNCKIHYMDSEETFIASNASSH"
FT   CDS             complement(1432..2322)
FT                   /codon_start=1
FT                   /product="RepA protein"
FT                   /db_xref="GOA:H9BAD9"
FT                   /db_xref="InterPro:IPR001146"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAD9"
FT                   /protein_id="AFD63015.1"
FT                   /translation="MPSSSTRQNNFRLQTKYVFLTYPHCSSTATSLRDFLWDKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRGDIRDPSFFDFEGNHPNIQPAKNSEQVLDYISK
FT                   DGNVITRGDFRKHKVSPTKHDERWRNIIQTATTKEEYLGMIRDQFPHEWATKLQWLEYS
FT                   ANKLFPDIEPPYENPFSPIDLQCHEEIQEWLNRDLYVVSVDAYTLIHPNINYQTATEDL
FT                   IWMDHFTRNPNNSNTEGTPSTSADQLVPVRHPGLAVSADTTTLTEEWTSPRTTLTPPTI
FT                   SSTTSPSSSAQTGSN"
XX
SQ   Sequence 2594 BP; 711 A; 488 C; 633 G; 762 T; 0 other;
     atgtttccct ccctttatca aatattccct tctgaggaga attactctta tacccctgtt        60
     cagacgcagg agtctttttc tggtgcgaaa gcaggtgatt catccgagca cgtcttctcc       120
     aaagtcgtcg tagctttaat tattattctt ttttcagtgg gaatcattta tcttgcgtat       180
     actttatttt taaaagattt gatattatta ttaaaggcta aaaagcagag gacgacgaca       240
     gagatagggt ttggtaatac ccctgctaga cccggttctc aacctcaaca aaatggcggg       300
     ccgatttaag ggacaggtgt acagcaggaa acgtggtcgt aatgcaaagg tgtatcaggc       360
     tttgggagtt aaatctcagc gggagttgga gcagttagtt aaccaaccag gacgtcctgt       420
     tccgaacaga cgtccgtcat tgcaggtcgc agagtatctg tggacgacca acaaggctgg       480
     tgtgacgttt tcgcctggtg ggggaacgta tttgttcact aattaccctc aaggggcgaa       540
     cgagaactgc aggcacacta accggaccat aacgtacaag atggctatca agtgttgggt       600
     tgccctggat gggtctatgg tggctagggt tgcaaagttc cccgtccatt tctggttagt       660
     gtacgacaag aaccctggtg atacgaatcc tctcccatcg gctatttttg atagtctcta       720
     tcaagatcag cctgggactt ggactgtaac gaggaatgtg tgtcataggt tcgttgttaa       780
     aaagtcttgg tccgtgatgc tggagtccaa tgggatcgat cccagtaagt ctcagtccac       840
     atcatattat gggcctgggc cttgtaataa ttggaggcac atgaccaaat tttttaaacg       900
     tttaggagtt agtacagagt ggaagaattc ttccactggt gatgtagctg atattaaaga       960
     gggagcacta tatcttgtat gtgctccgtc aggtggtgca accattaagg ttgggggtcg      1020
     atttcgaatg tattttaaat ccgttggtaa tcaataaata aaatatattt ctcttatgat      1080
     tttatattaa taagattcaa tattgagaac aaaaattcat tagcatcgaa atccaataca      1140
     aaaaacacac accagaaaaa aaagcaaaac ccaaacaaca ttacactata tgtatacttc      1200
     aaacgaagga gaggcacgtt tagtgactcg acgcatttga agcaataaat gtctcctctg      1260
     aatccatgta atggatcttg cagttggatt caaagtattc cttctgagag gaagacatat      1320
     ctgataacca gtcgtcgtca ttattaacta atataataca tggtattccc cctttgatcc      1380
     tcttcttttt gccgtatttt gggtttacgg tgaattcctt ctgcgatccc actaattgct      1440
     tccagtttgg gcagaacttg aaggggatgt cgtcgatgat attgtaggtg gcgttagtgt      1500
     cgtacgtggt gaagtccact cctccgttaa agtagttgtg tctgccgaga ctgcgagccc      1560
     aggatgtctt accggtacga gttggtccgc agatgtagag ggagttcctt cggtgttgga      1620
     gttgttcggg ttcctggtaa aatggtccat ccatatcaaa tcttcagttg ctgtttggta      1680
     attgatattt ggatgaatta aagtgtaagc atcgacgctt accacgtaca ggtctctgtt      1740
     cagccactct tgtatttctt cgtggcactg aagatcaatg ggggagaagg ggttttcata      1800
     tggaggctct atatctggga acagtttatt ggcgctatat tcaagccatt gtagtttggt      1860
     cgcccattca tgagggaact gatccctaat catgcccaaa tattcctcct tagttgttgc      1920
     agtctggata atgtttcgcc atcgttcatc atgtttagta ggggagacct tgtgttttcg      1980
     aaagtctcct ctcgtgatga cgtttccgtc ctttgatatg taatcaagga cttgttcaga      2040
     atttttagct ggttggatat ttggatggtt tccttcaaaa tcaaaaaaag aagggtcacg      2100
     tatatcccct cttttatcaa gctgaagaag acagtgaaga tggggagtac catcttgatg      2160
     gagctcagta gcaacagcaa taaagaaaat agcaaaacgt gagagtttgt cccagagaaa      2220
     gtctctgagg cttgttgcag tagagctgca atggggataa gtaagaaaaa catatttggt      2280
     ttgaagacgg aagttgtttt ggcgtgttga agaagaaggc attatttagg ctttcctcaa      2340
     acagtgtttt gcaaactcta tcttaaccag cgagtgagga aaatgagaag gggagtgagg      2400
     tattttttaa aaattggggg gcgaatagcc cgctgacacc gcgtggggcg cactcgcgga      2460
     atttaatgtt acccgcgagt gcctggcccc acgcgagcac gttagtgcga gcgataatgc      2520
     gaggaaaaag cataagtcct catgaggaaa agttagtgct atataaagat gatgtgacat      2580
     taagagagag aaca                                                        2594
//