ID   JN989424; SV 1; circular; genomic DNA; STD; VRL; 2570 BP.
XX
AC   JN989424;
XX
DT   20-MAR-2012 (Rel. 112, Created)
DT   17-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Chickpea chlorosis virus-E isolate CpCV-E_AU_3458H_2002, complete genome.
XX
KW   .
XX
OS   Chickpea chlorosis virus-E
OC   Viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-2570
RX   PUBMED; 22406325.
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Kraberger S., Stainton D.,
RA   Dayaram A., Parry J.N., Pande D., Martin D.P., Varsani A.;
RT   "Molecular characterisation of dicot-infecting mastreviruses from
RT   Australia";
RL   Virus Res. 166(1-2):13-22(2012).
XX
RN   [2]
RP   1-2570
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Parry J.N., Kraberger S.,
RA   Stainton D., Dayaram A., Pande D., Martin D.P., Varsani A.;
RT   ;
RL   Submitted (03-NOV-2011) to the INSDC.
RL   School of Biological Sciences, University of Canterbury, Private Bag 4800,
RL   Christchurch 8140, New Zealand
XX
DR   MD5; 9055f7c68cd9cf84e3057dd6feec15c4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2570
FT                   /organism="Chickpea chlorosis virus-E"
FT                   /host="Cicer arietinum (chickpea)"
FT                   /isolate="CpCV-E_AU_3458H_2002"
FT                   /mol_type="genomic DNA"
FT                   /country="Australia"
FT                   /lat_lon="30.18 S 149.72 E"
FT                   /collection_date="2002"
FT                   /db_xref="taxon:1162556"
FT   CDS             1..309
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:H9BAE0"
FT                   /db_xref="InterPro:IPR002621"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAE0"
FT                   /protein_id="AFD63003.1"
FT                   /translation="MFPSLYQIFPSEENYSYTPVQTQESFSGAKAGDSSEHVFSKVVVA
FT                   LIIILFSVGIIYLAYTLFLKDLILLLKAKKQRTTTEIGFGNTPARPGSQPQQNGGPI"
FT   CDS             293..1057
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H9BAC5"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAC5"
FT                   /protein_id="AFD63004.1"
FT                   /translation="MAGRFKGQVYSRKRGRNAKVYQALGVKSQRELEQLVNQPGRPVPN
FT                   RRPSLQVAEYLWTTNKAGVTFSPGGGTYLFTNYPQGANENCRHTNRTITYKMAIKCWVA
FT                   LDGSMVARVAKFLVHFWLVYDKNPGDTNPSPSAIFDSLYQDQPGTWTVTRNVCHRFVVK
FT                   KSWSVMLESNGIDPSKSQSTSYYGPGPCNNWRHMTKFFKRLGVSTEWKNSSTGDVADIK
FT                   EGALYLVCAPSGGATIKVGGRFRMYFKSVGNQ"
FT   CDS             complement(join(1220..1633,1723..2298))
FT                   /codon_start=1
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:H9BAC6"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAC6"
FT                   /protein_id="AFD63006.1"
FT                   /translation="MPSSSTRQNNFRLQTKYVFLTYPHCSSTATSLRDFLWDKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRGDIRDPSFFDFEGNHPNIQPAKNSEQVLDYISK
FT                   DGNVITRGDFRKHKVSPTKHDERWRTIIQTATTKDQFPHEWATKLQWLEYSANKLFPDI
FT                   EPPYENPFSPIDLQCHEEIQEWLNRDLYVEPEQLQHRRNSLYICGPSRTGKTSWARSLG
FT                   RHNYFNGGVDFTTYDTNATYNIIDDIPFKFCPNWKQLVGSQKDFTVNPKYGKKKRIKGG
FT                   IPCIILVNNDDDWLSDMSSSQKEYFESNCKIHYMDSEETFIASNASSH"
FT   CDS             complement(1432..2298)
FT                   /codon_start=1
FT                   /product="RepA protein"
FT                   /db_xref="GOA:H9BAC7"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAC7"
FT                   /protein_id="AFD63005.1"
FT                   /translation="MPSSSTRQNNFRLQTKYVFLTYPHCSSTATSLRDFLWDKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRGDIRDPSFFDFEGNHPNIQPAKNSEQVLDYISK
FT                   DGNVITRGDFRKHKVSPTKHDERWRTIIQTATTKDQFPHEWATKLQWLEYSANKLFPDI
FT                   EPPYENPFSPIDLQCHEEIQEWLNRDLYVVSVDAYTLIHPNINYQTATEDLIWMDHFTR
FT                   NPNNSNTEGTPSTSADQVVPVRHLGLAVSADTTTLTEEWTSPRTTLTPPTISSTTSPSS
FT                   SAQTGSN"
XX
SQ   Sequence 2570 BP; 707 A; 476 C; 634 G; 753 T; 0 other;
     atgtttccct ccctttatca aatattccct tctgaggaga attactctta tacccctgtt        60
     cagacgcagg agtctttttc tggtgcgaaa gcaggtgatt catccgagca cgtcttctcc       120
     aaagtcgtcg tagctttaat tattattctt ttttcagtgg gaatcattta tcttgcgtat       180
     actttatttt taaaagattt gatattatta ttaaaggcta aaaagcagag gacgacgaca       240
     gagatagggt ttggtaatac ccctgctaga cccggttctc aacctcagca aaatggcggg       300
     ccgatttaag ggacaggtgt acagcaggaa acggggtcgt aatgcaaagg tgtatcaggc       360
     tttgggagtt aaatctcagc gggagttgga gcagttggtt aaccaaccag gacgtcctgt       420
     tccgaacaga cgtccgtcat tgcaggtcgc agagtatctg tggacgacca acaaggctgg       480
     tgtgacgttt tcgcctggtg ggggaacgta tttgttcact aattaccctc aaggggcgaa       540
     cgagaactgc aggcacacta accggaccat aacgtacaag atggctatca agtgttgggt       600
     tgccctggat gggtctatgg tggctagggt tgcaaagttc ctagtccatt tctggttagt       660
     gtacgacaag aacccgggtg atacgaatcc ctctccatcg gctatttttg atagtctcta       720
     tcaagatcag cctgggactt ggactgtaac gaggaatgtg tgtcataggt tcgttgttaa       780
     aaagtcttgg tccgtgatgc tggagtccaa tgggattgat cccagtaagt ctcagtccac       840
     atcatattat gggcctgggc cttgtaataa ttggaggcac atgaccaaat tttttaaacg       900
     tttaggagtt agtacagagt ggaagaattc ttccactggt gatgtagctg atattaaaga       960
     gggagcacta tatcttgtat gtgctccgtc aggtggtgca accattaagg ttgggggtcg      1020
     atttcgaatg tattttaaat ccgttggtaa tcaataaata aaatatattt ctcttatgat      1080
     tttatattaa taagattcaa tattgagaac aaaaattcat tagcatcgaa atccaataca      1140
     aaaaacacac accagaaaaa aaagcaaaac ccaaacaaca atacactata tgtatacttc      1200
     aaacgaagga gaggcacgtt tagtgactcg acgcatttga agcaataaat gtctcctctg      1260
     aatccatgta atggatcttg cagttggatt caaagtattc cttctgagag gaagacatat      1320
     ctgataacca gtcgtcgtca ttattaacta atataataca tggtattccc cctttgatcc      1380
     tcttcttttt gccgtatttt gggtttacgg tgaagtcctt ctgcgatccc actaattgct      1440
     tccagtttgg gcagaacttg aaggggatgt cgtcgatgat attgtaggtg gcgttagtgt      1500
     cgtacgtggt gaagtccact cctccgttaa agtagttgtg tctgccgaga ctgcgagccc      1560
     aagatgtctt accggtacga cttggtccgc agatgtagag ggagttcctt cggtgttgga      1620
     gttgttcggg ttcctggtaa aatggtccat ccatatcaaa tcttcagttg ctgtttggta      1680
     attgatattt ggatgaatta aagtgtaagc atcgacgctt accacgtaca ggtctctgtt      1740
     cagccactcc tgtatttctt cgtggcactg aagatcaatg ggggagaagg ggttttcata      1800
     tggaggctct atatctggga acagtttatt ggcgctatat tcaagccatt gtagtttggt      1860
     cgcccattca tgagggaact gatccttagt tgttgcagtc tggataatag ttcgccatcg      1920
     ttcatcatgt ttagtagggg agaccttgtg ttttcgaaag tctcctctcg tgatgacgtt      1980
     tccgtccttt gatatgtaat caaggacttg ttcagaattt ttagctggtt ggatatttgg      2040
     atggtttcct tcaaaatcaa aaaaagaagg gtcacgtata tcccctcttt tatcaagctg      2100
     aagaagacag tgaagatggg gagtaccatc ttgatggagc tcagtagcaa cagcaataaa      2160
     gaaaatagca aaacgtgata gtttgtccca gagaaagtct ctgaggcttg ttgcagtaga      2220
     gctgcaatgg ggataagtaa gaaaaacata tttggtttga agacggaagt tgttttggcg      2280
     tgttgaagaa gaaggcatta tttaggcttt cctcaaacag tgttttgcaa actctatctt      2340
     aaccagcgag tgaggaaaat gaggaagggg agtgagaggt attttattgg aatttaaggg      2400
     cgaatagccc gctgacacgt ggggcgcact cgcggaattt aatgttaccc gcgagtgcct      2460
     ggccccacgc gagcacgtta gtgcgagcga taatgcgagg aaaaagcata agtcctcatg      2520
     aggaaaagtt agtgctatat aaagatgatg tgacattaag agagagaaca                 2570
//