ID   JN989423; SV 1; circular; genomic DNA; STD; VRL; 2574 BP.
XX
AC   JN989423;
XX
DT   20-MAR-2012 (Rel. 112, Created)
DT   17-MAR-2013 (Rel. 116, Last updated, Version 3)
XX
DE   Chickpea chlorosis Australia virus isolate CpCV-D_AU_3768F_2003, complete
DE   genome.
XX
KW   .
XX
OS   Chickpea chlorosis Australia virus
OC   Viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-2574
RX   PUBMED; 22406325.
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Kraberger S., Stainton D.,
RA   Dayaram A., Parry J.N., Pande D., Martin D.P., Varsani A.;
RT   "Molecular characterisation of dicot-infecting mastreviruses from
RT   Australia";
RL   Virus Res. 166(1-2):13-22(2012).
XX
RN   [2]
RP   1-2574
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Parry J.N., Kraberger S.,
RA   Stainton D., Dayaram A., Pande D., Martin D.P., Varsani A.;
RT   ;
RL   Submitted (03-NOV-2011) to the INSDC.
RL   School of Biological Sciences, University of Canterbury, Private Bag 4800,
RL   Christchurch 8140, New Zealand
XX
DR   MD5; 17c98585c8796c981b889f697f771f5b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2574
FT                   /organism="Chickpea chlorosis Australia virus"
FT                   /host="Cicer arietinum (chickpea)"
FT                   /isolate="CpCV-D_AU_3768F_2003"
FT                   /mol_type="genomic DNA"
FT                   /country="Australia"
FT                   /lat_lon="32.57 S 148.23 E"
FT                   /collection_date="2003"
FT                   /note="originally submitted as Chickpea chlorosis virus-D"
FT                   /db_xref="taxon:1302848"
FT   CDS             1..306
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:H9BAC0"
FT                   /db_xref="InterPro:IPR002621"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAC0"
FT                   /protein_id="AFD62999.1"
FT                   /translation="MYPAKYVVYPSESNYSYTPVGGDSSDTSSGSSSSENIFSKVVVAL
FT                   VIILFTVGIIYLAYTLFLKDLILLLKAKKQRTTTEIGFGNTPARPNSQRQQDVGPV"
FT   CDS             290..1054
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H9BAC1"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAC1"
FT                   /protein_id="AFD63000.1"
FT                   /translation="MSGRYKGQVYRRKKGQYAKAYSALGVNSKRELEQLVNQPGRPLQL
FT                   RRPALQVAEYLWTSNKAGVTFSPGGSTFLFTNFPQGANENCRHTNRTITYKMAIKAWVA
FT                   LDGSMVSRVCKFPVYFWLVYDKNPGDNNPGPSAIFDTLYQDQPGTWTVTRNVCHRFVVK
FT                   KQWSVMLEANGVDPSVKQGSNYYGPGPCYGWRQMNKFFKRLGVSTEWKNSSTGDVADIK
FT                   EGALYLVCAPGGGATVRVGGRFRMYFKSVGNQ"
FT   CDS             complement(join(1179..1622,1712..2311))
FT                   /codon_start=1
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:H9BAC2"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAC2"
FT                   /protein_id="AFD63001.1"
FT                   /translation="MPQAKKTSSSFRLQTKYVFLTYPRCSSDAESLRDFLWEKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRSNIRDPYFFDFQGNHPNIQPAKNSEQVLDYISK
FT                   DGSVITRGDFRKHKVSPTKSDDRWRTIIQTATTKEDYLEMIKTEFPHEWATKLQWLEYS
FT                   ANKLFPDVEPPYSSPFPNEFLQCDEEINEWLNRDLYVEPEQLQHRRRSLYICGPSRTGK
FT                   TTWARSLGRHNYFNGGIDFTTYDPNATFNIIDDIPFKFCPNWKQLVGSQKDFTVNPKYG
FT                   KKKRVKGGIPTIILVNNDDDWIKDMSSSQNEYFESNCLIHYMTEGETFIAARRQVTQRA
FT                   SPPSENI"
FT   CDS             complement(1466..2311)
FT                   /codon_start=1
FT                   /product="RepA protein"
FT                   /db_xref="GOA:H9BAC3"
FT                   /db_xref="InterPro:IPR001146"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAC3"
FT                   /protein_id="AFD63002.1"
FT                   /translation="MPQAKKTSSSFRLQTKYVFLTYPRCSSDAESLRDFLWEKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRSNIRDPYFFDFQGNHPNIQPAKNSEQVLDYISK
FT                   DGSVITRGDFRKHKVSPTKSDDRWRTIIQTATTKEDYLEMIKTEFPHEWATKLQWLEYS
FT                   ANKLFPDVEPPYSSPFPNEFLQCDEEINEWLNRDLYVVSVESYHLLHPNLSIQTATEDL
FT                   IWMDDYTRNPNNSNTEEDPSTSADQVVPERQHGQEASEDTITSTEESTSPPTTPTPPST
FT                   "
XX
SQ   Sequence 2574 BP; 722 A; 454 C; 579 G; 819 T; 0 other;
     atgtatcccg ccaagtacgt ggtgtatcct tcagagagta attactctta tacccctgtt        60
     ggtggtgatt cgtctgatac ttcgtcagga agttcttcat ctgaaaatat tttttcgaaa       120
     gttgtggttg ctcttgtaat tatattattt actgtaggta taatttattt agcttatact       180
     ctttttttaa aagatttaat tcttttattg aaggccaaga agcagagaac cacaactgag       240
     atagggtttg gaaatacccc tgcacgacct aatagtcaga ggcaacaaga tgtcgggccg       300
     gtataaggga caggtataca gaaggaagaa ggggcagtat gcaaaggcgt attccgcact       360
     tggagttaat tcaaaacggg agttggagca gttagttaat caacctgggc gtcctcttca       420
     actaaggcgc ccagccctgc aggttgctga atacctgtgg acgtccaata aggccggtgt       480
     tacgttttct cctgggggtt ccacattttt gttcactaat ttccctcagg gtgctaatga       540
     aaactgcagg cacactaacc gcaccatcac ttacaagatg gccataaagg catgggttgc       600
     cttggatggc tctatggtta gcagggtgtg caaatttcca gtatatttct ggttagtgta       660
     tgacaagaac cctggtgata ataatcctgg gccctcagcc atatttgata ctctctatca       720
     agatcagcct ggtacatgga ctgttacccg caatgtttgt cacaggttcg ttgttaaaaa       780
     acaatggtct gtgatgctgg aagctaatgg agtggatcct agtgtgaaac aaggatctaa       840
     ttactatggt cctggacctt gctatggttg gaggcagatg aacaagtttt ttaagaggct       900
     cggagttagc actgagtgga agaattcttc cacaggggat gttgctgata ttaaagaagg       960
     agcactctat cttgtatgtg ctcctggagg tggtgcaacc gttagggttg ggggtagatt      1020
     tcgcatgtat ttcaaatcag ttggaaatca ataaaaaaat tatttaatat tttgatgtca      1080
     tattattgag taatagtaga tagaaaatta caaatgttta ttacacaatt ataaaacaac      1140
     cccaaataaa aactaaatta cacacaaagc aaattacatt atatattctc tgaaggagga      1200
     gaggcacgtt gagtgacttg acgacgcgca gcaataaatg tttctccctc agtcatgtaa      1260
     tgaattaaac aattggattc aaagtattca ttctgagagg aagacatgtc ttttatccaa      1320
     tcgtcatcat tatttactaa tataatagtt gggatacctc ccttaaccct ttttttttta      1380
     ccatattttg ggttcacagt aaaatctttc tgtgaaccta ctaattgctt ccaatttgga      1440
     caaaatttaa atggtatatc atcaattatg ttgaaggtgg cgttggggtc gtaggtggtg      1500
     aagtcgattc ctccgttgaa gtaattgtgt cttccgaggc ttcttgccca tgttgtcttt      1560
     ccggtacgac ttggtccgca gatgtagagg gatcttcttc tgtgttggag ttgttcgggt      1620
     tcctggtgta gtcatccatc caaattagat cttctgttgc agtttgtata gataaatttg      1680
     gatgaagtaa atggtaagat tctacactta ccacgtaaag gtccctgtta agccactcat      1740
     taatttcttc atcacattga agaaattcat ttggaaatgg actagagtaa ggtggttcaa      1800
     catctggaaa tagtttattt gcgctatatt ctagccattg gagttttgtg gcccattcat      1860
     gtggaaattc agttttaatc atttccaaat aatcttcttt agttgttgca gtctgaataa      1920
     tagttctcca tctgtcatca gattttgttg gggagacttt gtgttttcta aagtctcctc      1980
     ttgtgatgac acttccatcc ttggagatgt agtcaagaac ttgttcagaa tttttagctg      2040
     gttggatatt tggatggttt ccttgaaaat caaaaaaata agggtcacgt atattgcttc      2100
     ttttgtcaag ttgaagcagg cagtgaagat ggggagtacc atcttggtga agctcagtag      2160
     caacagcgat aaagaaaata gcaaaacgtg aaagtttttc ccagagaaag tctctaagac      2220
     tttcggcatc tgagctgcag cgaggataag taaggaagac atattttgtt tgaagtctga      2280
     atgaagatga ggtttttttt gcttggggca tattttggct cagaacagtg ttttgaaatt      2340
     ctatccttac tagcgagtga gccaaatgag ccactctgat gtgtattaaa taataggcaa      2400
     ggaccaatgc cttgttccca cgtggggcgc actcgcggaa atttaatgtt acccgcgagt      2460
     gccctggccc cacgcgagca cgatagtgcg agcaaaaagt tgaagataag atgcttttgc      2520
     tcattagcca ctcttagtgc tatataaagg tgatgtgatc tctccacttt gaaa            2574
//