ID   JN989418; SV 1; circular; genomic DNA; STD; VRL; 2574 BP.
XX
AC   JN989418;
XX
DT   20-MAR-2012 (Rel. 112, Created)
DT   17-MAR-2013 (Rel. 116, Last updated, Version 3)
XX
DE   Chickpea chlorosis Australia virus isolate CpCV-D_AU_2008_2007, complete
DE   genome.
XX
KW   .
XX
OS   Chickpea chlorosis Australia virus
OC   Viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-2574
RX   PUBMED; 22406325.
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Kraberger S., Stainton D.,
RA   Dayaram A., Parry J.N., Pande D., Martin D.P., Varsani A.;
RT   "Molecular characterisation of dicot-infecting mastreviruses from
RT   Australia";
RL   Virus Res. 166(1-2):13-22(2012).
XX
RN   [2]
RP   1-2574
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Parry J.N., Kraberger S.,
RA   Stainton D., Dayaram A., Pande D., Martin D.P., Varsani A.;
RT   ;
RL   Submitted (03-NOV-2011) to the INSDC.
RL   School of Biological Sciences, University of Canterbury, Private Bag 4800,
RL   Christchurch 8140, New Zealand
XX
DR   MD5; e7bd7dc95ab5f2e024612e06d7e34265.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2574
FT                   /organism="Chickpea chlorosis Australia virus"
FT                   /host="bean"
FT                   /isolate="CpCV-D_AU_2008_2007"
FT                   /mol_type="genomic DNA"
FT                   /country="Australia"
FT                   /lat_lon="37.84 S 147.61 E"
FT                   /collection_date="2007"
FT                   /note="originally submitted as Chickpea chlorosis virus-D"
FT                   /db_xref="taxon:1302848"
FT   CDS             1..306
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:H9BAA0"
FT                   /db_xref="InterPro:IPR002621"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAA0"
FT                   /protein_id="AFD62979.1"
FT                   /translation="MYSAKYVVYPSDSNYSYTPVGGDSSDTSSGSSSSENIFSKVVVAL
FT                   IIILFTVGIIYLAYTLFLKDLILLLKAKKQRTTTEIGFGNTPARPNSQRQQDVGPV"
FT   CDS             290..1054
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H9BAA1"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAA1"
FT                   /protein_id="AFD62980.1"
FT                   /translation="MSGRYKGQVYRRKKGQYAKAYSALGVNSKRELEQLVNQPGRPLQV
FT                   RRPALQVAEYLWTSNKAGVTFSPGGSTFLFTNFPQGANENCRHTNRTISYKMAIKAWVA
FT                   LDGSMVNRVCKFPVYFWLVYDKNPGDSNPGPSAIFDTLYQDQPGTWTVTRNVCHRFVVK
FT                   KQWSVMLEANGVDPSVKQGSTYYGPGPCYGWRQMNKFFKRLGVSTEWKNSSTGDVADIK
FT                   EGALYLVCAPAGGATVRVGGRFRMYFKSVGNQ"
FT   CDS             complement(join(1179..1622,1712..2311))
FT                   /codon_start=1
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:H9BAA2"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAA2"
FT                   /protein_id="AFD62981.1"
FT                   /translation="MPQTKKPSSSFRLQTKYVFLTYPRCSSDAESLRDFLWEKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRSNIRDPSFFDFQGNHPNIQPAKNSEQVLDYISK
FT                   DGSVITRGDFRKHKVSPTKSDDRWRTIIQTATTKEDYLEMIKTEFPHEWATKLQWLEYS
FT                   ANKLFPDIEPPYSSPFPNEFLQCDEEITEWLNRDLYVEPEQLQHRRRSLYICGPTRTGK
FT                   TSWARSLGRHNYFNGGIDFTTYDPNATFNIIDDIPFKFCPNWKQLVGSQKDFTVNPKYG
FT                   KKKRVKGGIPTIILVNNDDDWIKDMSSSQNEYFESNCLIHYMTEEETFIAARRQVTQRA
FT                   SPPSENI"
FT   CDS             complement(1466..2311)
FT                   /codon_start=1
FT                   /product="RepA protein"
FT                   /db_xref="GOA:H9BAA3"
FT                   /db_xref="InterPro:IPR001146"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:H9BAA3"
FT                   /protein_id="AFD62982.1"
FT                   /translation="MPQTKKPSSSFRLQTKYVFLTYPRCSSDAESLRDFLWEKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRSNIRDPSFFDFQGNHPNIQPAKNSEQVLDYISK
FT                   DGSVITRGDFRKHKVSPTKSDDRWRTIIQTATTKEDYLEMIKTEFPHEWATKLQWLEYS
FT                   ANKLFPDIEPPYSSPFPNEFLQCDEEITEWLNRDLYVVSVESYHLLHPNLSIQTATEDL
FT                   IWMDDYTRNPNNSNTEEDPSTSADQLVPVRPPGQEASEDTITSTEESTSQPMTPTPPST
FT                   "
XX
SQ   Sequence 2574 BP; 729 A; 448 C; 580 G; 817 T; 0 other;
     atgtattccg ccaagtacgt ggtgtatcct tcagatagta attactctta tacccctgtt        60
     ggtggtgatt cctctgatac ttcctcagga agttcttcat ctgaaaatat tttttcgaaa       120
     gttgtggttg ctcttataat tattttattt actgtaggta taatttattt agcttatact       180
     ctttttttaa aagatttaat tcttttattg aaggccaaga agcagagaac cacaactgag       240
     atagggtttg gaaatacccc tgcacgacct aatagtcaga ggcaacaaga tgtcgggccg       300
     gtataaggga caggtgtaca gaaggaagaa ggggcagtat gcaaaggcgt attccgcact       360
     tggagttaat tcaaaacggg agttggagca gttagttaat caacctgggc gtcctcttca       420
     agtaaggcgc ccagccctgc aggttgctga atacctgtgg acgtccaata aggcgggtgt       480
     tacgttttct cctgggggtt caacattttt gttcactaat ttccctcagg gtgctaatga       540
     aaactgcagg cacactaacc gcaccatcag ttacaagatg gccataaagg catgggttgc       600
     cttggatggc tctatggtta acagggtgtg caaatttcca gtatatttct ggttagtgta       660
     tgacaagaac cctggtgata gtaatcctgg gccctcagcc atatttgata ctctctatca       720
     agatcagcct ggtacatgga ctgttacccg caatgtttgt cacaggttcg ttgttaaaaa       780
     acaatggtct gtgatgctgg aagctaatgg agtggatcct agtgtgaaac aagggtctac       840
     ttactatggt cctggacctt gctatggttg gaggcagatg aacaagtttt ttaagaggct       900
     cggagttagt actgagtgga agaattcttc cacaggggat gttgctgata ttaaagaagg       960
     agcactctat cttgtatgtg ctcctgcagg tggtgcaacc gttagggttg ggggtagatt      1020
     tcgcatgtat ttcaaatcag ttggaaatca ataaaaaaat tatttaatat tttgatgtca      1080
     tattattgag taatagtaga tagaaaatta caaatgttta ttacacaatt ataaaacaac      1140
     cccaaataaa aactaaatta cacacaaagc aaattacatt atatattctc tgaaggagga      1200
     gaggcacgtt gagtgacttg acgacgcgca gcaataaatg tttcttcctc agtcatgtaa      1260
     tgaattaaac aattggattc aaagtattca ttctgagagg aagacatgtc tttgatccaa      1320
     tcgtcatcat tatttactaa tataatagtt gggatacctc ccttaaccct ttttttttta      1380
     ccatattttg ggttcacagt aaaatctttc tgtgaaccta ctaattgctt ccaatttgga      1440
     caaaatttaa atggtatatc atcaattatg ttgaaggtgg cgttggggtc ataggttgtg      1500
     aagtcgattc ctccgttgaa gtaattgtgt cttccgaggc ttcttgccca ggaggtctta      1560
     ccggtacgag ttggtccgca gatgtagagg gatcttcttc tgtgttggag ttgttcgggt      1620
     tcctggtgta gtcatccatc caaattagat cttctgttgc agtttgtata gataaatttg      1680
     gatgaagtaa atggtaagat tctacactta ccacgtaaag gtctctgtta agccactcag      1740
     taatttcttc atcacattga agaaattcat ttggaaatgg actagagtaa ggaggttcaa      1800
     tatctggaaa tagtttattt gcactatatt ctagccattg gagttttgtg gcccattcat      1860
     gtggaaattc agttttaatc atttccaaat aatcttcttt agttgttgca gtctgaataa      1920
     tagttctcca tctgtcatca gattttgttg gggagacctt gtgttttcta aagtctcctc      1980
     ttgtgatgac acttccatcc ttggagatgt agtcaagaac ttgttcagaa tttttagctg      2040
     gttggatatt tggatggttt ccttgaaaat caaaaaaaga agggtcacgt atattgcttc      2100
     ttttgtcaag ttgaagcagg cagtgaagat ggggagtacc atcttggtga agctcagtag      2160
     caacagcgat aaagaaaata gcaaaacgtg aaagtttttc ccagagaaag tctctaagac      2220
     tttcggcatc tgagctgcag cgaggataag taaggaagac atattttgtt tgaagtctga      2280
     atgaagatga gggttttttt gtttgaggca tattttggct cagaacagtg ttttgaaact      2340
     ctatccttac tagcgagtga gccaaatgag ccactctgat gtgtattaaa taatagacaa      2400
     agaccaattc cttgttgcca cgtggggcgc actcgcggaa attaatgtta cccgcgagtg      2460
     ccctggcccc acgcgagcac gatagtgcga gcaaaaaagt tgaagataag atgcttttgc      2520
     tcattagcca ctcttagtgc tatataaagg tgatgtgatc tctccacttt gaaa            2574
//