ID   JN989417; SV 1; circular; genomic DNA; STD; VRL; 2586 BP.
XX
AC   JN989417;
XX
DT   20-MAR-2012 (Rel. 112, Created)
DT   17-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Chickpea chlorosis virus-C isolate CpCV-C_AU_3494Ib_2002, complete genome.
XX
KW   .
XX
OS   Chickpea chlorosis virus-C
OC   Viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-2586
RX   PUBMED; 22406325.
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Kraberger S., Stainton D.,
RA   Dayaram A., Parry J.N., Pande D., Martin D.P., Varsani A.;
RT   "Molecular characterisation of dicot-infecting mastreviruses from
RT   Australia";
RL   Virus Res. 166(1-2):13-22(2012).
XX
RN   [2]
RP   1-2586
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Parry J.N., Kraberger S.,
RA   Stainton D., Dayaram A., Pande D., Martin D.P., Varsani A.;
RT   ;
RL   Submitted (03-NOV-2011) to the INSDC.
RL   School of Biological Sciences, University of Canterbury, Private Bag 4800,
RL   Christchurch 8140, New Zealand
XX
DR   MD5; 0c053a509e495b9cafc099b62e3e8498.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2586
FT                   /organism="Chickpea chlorosis virus-C"
FT                   /host="Cicer arietinum (chickpea)"
FT                   /isolate="CpCV-C_AU_3494Ib_2002"
FT                   /mol_type="genomic DNA"
FT                   /country="Australia"
FT                   /lat_lon="31.2 S 147.67 E"
FT                   /collection_date="2002"
FT                   /db_xref="taxon:1162554"
FT   CDS             1..309
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:H9BA96"
FT                   /db_xref="InterPro:IPR002621"
FT                   /db_xref="UniProtKB/TrEMBL:H9BA96"
FT                   /protein_id="AFD62975.1"
FT                   /translation="MFPAKYQIFPSENNYSYTPVQTQESLSGVKAGDSSEHVFSKVVVS
FT                   LVVILFSVGIFYLAYTLFLKDLILLLKAKKQRTTTEIGFGNTPARRQDNNRQDAGPI"
FT   CDS             293..1057
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H9BA97"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:H9BA97"
FT                   /protein_id="AFD62976.1"
FT                   /translation="MPGPFKGQVYRRRKGRYAKVYQGLGVNSQRELEQLVNQPGRSVVN
FT                   RRPSLQVAEFLWTTNKAGVTFTPGGGMFLMNTYPQGANENCRYTNRTITYKMAIKCWVC
FT                   LDGSMVNRVARFPVYFWLVYDKNPGDALPGASAIFDSFYQDQPGTWTVTRNVCHRFVVK
FT                   KTWSVMLEANGVDPSQKQGSSYYGPGPCRSWCHMVKFFKRLGVSTEWKNSATGDVADIK
FT                   EGALYIVCAPAGGATVKVGGRFRMYFKSVGNQ"
FT   CDS             complement(join(1216..1629,1719..2318))
FT                   /codon_start=1
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:H9BA98"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:H9BA98"
FT                   /protein_id="AFD62977.1"
FT                   /translation="MPSSSKKPSSFRLQTKYVFLTYPRCSSPAKNLRDFLWDKLTHLAI
FT                   FFIAVATELHTDGTPHLHCLIQLDKRCNIRDPSFFDFQGSHPNIQPARNSDEVLDYISK
FT                   DGNIITKGEFKKHRVSPSKSNERWRTIIQTATSKEHYLDMIKKEFPHEWATKLQWLEYS
FT                   ANKLFPEIQPPYQSPFSSMDLQCHEQIQEWLNKDLYVGPKQLQHRRRSLFICGPNRTGK
FT                   TSWARSLGRHNYFNGGVDFTTYDPTATYNIIDDIPFKFCPNWKQLVGSQQDFTVNPKYG
FT                   KKKRIKGGVPCIILVNNDDDWMLDMSSTQKDYFESNCLIHYMSDGETFIALNASSH"
FT   CDS             complement(1428..2318)
FT                   /codon_start=1
FT                   /product="RepA protein"
FT                   /db_xref="GOA:H9BA99"
FT                   /db_xref="InterPro:IPR001146"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:H9BA99"
FT                   /protein_id="AFD62978.1"
FT                   /translation="MPSSSKKPSSFRLQTKYVFLTYPRCSSPAKNLRDFLWDKLTHLAI
FT                   FFIAVATELHTDGTPHLHCLIQLDKRCNIRDPSFFDFQGSHPNIQPARNSDEVLDYISK
FT                   DGNIITKGEFKKHRVSPSKSNERWRTIIQTATSKEHYLDMIKKEFPHEWATKLQWLEYS
FT                   ANKLFPEIQPPYQSPFSSMDLQCHEQIQEWLNKDLYVVNIDAYHLLHPNLSYEQATEDL
FT                   IWMDDYTRDPNNSNTEGDPSSSADQIVPVRPLGLDHSGGTTTSTEEWISPPTTPQPLTT
FT                   SSTTSPSSSAPTGSS"
XX
SQ   Sequence 2586 BP; 719 A; 475 C; 630 G; 762 T; 0 other;
     atgtttcccg ccaaatacca aatctttccg tctgagaata attactctta tacccccgtt        60
     cagacgcagg agtcgctctc aggtgtgaaa gcaggtgatt catccgagca cgttttctcc       120
     aaagtcgtcg tctcgcttgt agtaattctt ttttcagtgg gaatttttta tcttgcttat       180
     actttatttt taaaagattt aattttatta ttaaaggcaa aaaaacagag gacgacgact       240
     gagatagggt ttggtaatac acccgctagg aggcaggata acaacagaca agatgccggg       300
     cccatttaag ggtcaggttt acaggcgcag aaagggacgt tatgccaagg tgtaccaggg       360
     tctgggagtt aattcccaac gggagttgga gcagttagtt aaccaaccag gacggtctgt       420
     ggttaacaga cgtccgtcac tgcaggtcgc agagtttctg tggacgacca acaaggcagg       480
     tgtgaccttt acccctgggg gtggtatgtt cctcatgaat acttaccctc aaggggcgaa       540
     cgagaactgc agatacacta accggacaat aacatataaa atggcaatta agtgttgggt       600
     ttgcctggat gggtccatgg ttaaccgtgt tgcgaggttc ccagtctatt tctggttagt       660
     gtatgataag aacccagggg atgcattacc aggggcttcg gccatttttg atagcttcta       720
     tcaggatcag cctgggactt ggactgtgac gaggaacgtg tgtcataggt tcgtcgttaa       780
     aaaaacatgg tcagttatgc tggaggctaa tggtgttgat ccatctcaga agcaggggtc       840
     atcatactat ggtcctggac cttgcagatc ttggtgtcat atggttaagt tttttaaacg       900
     attaggagtt agtaccgagt ggaagaattc tgccaccggt gatgtagctg atattaagga       960
     aggagcactg tatattgttt gtgctcctgc aggtggtgca actgttaaag ttgggggtag      1020
     attccggatg tatttcaaat ccgttggaaa tcaataaaaa atatttattt ctattttgat      1080
     gtcatattaa tgagattcag tatagagaag aaaaatatat tcattgaaat ctgcaattac      1140
     atacagacgc aaaaaaaaat aattacaccc agaatacata actttatata ccccttgtac      1200
     gaaggagagg cacgtttagt gactcgacgc attcaaggca ataaatgtct ctccatcact      1260
     catataatgt attaaacaat tggattcaaa gtaatccttc tgtgtagaag acatatctaa      1320
     catccagtcg tcgtcattat taactaatat aatacatgga acaccccctt taatacgctt      1380
     cttttttcca tatttagggt tcacagtaaa gtcttgctgt gaccctacta actgcttcca      1440
     gttggggcag aacttgaagg ggatgtcgtc gatgatgttg taagtggctg tggggtcgta      1500
     ggtggtgaaa tccactcctc cgttgaagta gttgtgcctc ccgagtgatc tagcccaaga      1560
     ggtcttaccg gtacgatttg gtccgcagat gaagagggat ctccttctgt gttggagttg      1620
     tttgggtccc tggtgtaatc atccatccat attagatctt cagttgcctg ttcataagat      1680
     aaattaggat gtaaaaggtg ataggcatct atatttacca catataaatc tttattaagc      1740
     cactcctgta tttgttcgtg gcactgaaga tccatagaag aaaatgggga ttggtatggg      1800
     ggttgtattt ctgggaataa tttattagca ctatattcta gccattgcag tttagttgcc      1860
     cattcatggg ggaattcttt ttttatcatg tccagatagt gttccttaga tgttgcagtc      1920
     tggataatag ttctccatcg ttcattagat ttggagggtg atactctgtg cttcttgaat      1980
     tccccctttg tgatgatgtt tccgtccttg gatatgtagt caaggacctc gtcagaattc      2040
     ctagctggtt ggatattagg gtgacttcct tgaaaatcaa aaaaagaagg gtcacgtatg      2100
     ttgcatctct tgtcaagctg tataagacag tgaagatggg gagtaccatc ggtatgtaat      2160
     tcagtagcaa cagcaatgaa aaaaatagca agatgtgtga gtttatccca gagaaaatct      2220
     ctgagatttt ttgcaggaga gctgcagcgt ggataagtaa ggaagacata tttagtttga      2280
     agtctgaaag aagagggttt tttagacgag gaaggcatgt tttggctcaa acagtgtttt      2340
     gcaaactcta tcgttaaccc gtgagtgagc caactgagcc aaggtccttt tatagtatat      2400
     gaggcccaat gggccgatga cacgtggtgg ggcgcactcg cggattttaa tattacccgc      2460
     gagtgcccct ggccccacca cgcgagcacg tagtgcgagc gaaattgtct gcgtgcgaga      2520
     aaagcatctg gcttatgagc aaaagtaagc actataaaaa ggtgatgtga catcaggaga      2580
     gagaaa                                                                 2586
//