ID   JN989414; SV 1; circular; genomic DNA; STD; VRL; 2587 BP.
XX
AC   JN989414;
XX
DT   20-MAR-2012 (Rel. 112, Created)
DT   17-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Chickpea chlorosis virus-A isolate CpCV-A_AU_3459F_2002, complete genome.
XX
KW   .
XX
OS   Chickpea chlorosis virus-A
OC   Viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-2587
RX   PUBMED; 22406325.
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Kraberger S., Stainton D.,
RA   Dayaram A., Parry J.N., Pande D., Martin D.P., Varsani A.;
RT   "Molecular characterisation of dicot-infecting mastreviruses from
RT   Australia";
RL   Virus Res. 166(1-2):13-22(2012).
XX
RN   [2]
RP   1-2587
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Parry J.N., Kraberger S.,
RA   Stainton D., Dayaram A., Pande D., Martin D.P., Varsani A.;
RT   ;
RL   Submitted (03-NOV-2011) to the INSDC.
RL   School of Biological Sciences, University of Canterbury, Private Bag 4800,
RL   Christchurch 8140, New Zealand
XX
DR   MD5; bdfd0a870afaeff89ba1350853a7433b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2587
FT                   /organism="Chickpea chlorosis virus-A"
FT                   /host="Cicer arietinum (chickpea)"
FT                   /isolate="CpCV-A_AU_3459F_2002"
FT                   /mol_type="genomic DNA"
FT                   /country="Australia"
FT                   /lat_lon="30.16 S 149.7 E"
FT                   /collection_date="2002"
FT                   /db_xref="taxon:887825"
FT   CDS             1..309
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:E5DE80"
FT                   /db_xref="InterPro:IPR002621"
FT                   /db_xref="UniProtKB/TrEMBL:E5DE80"
FT                   /protein_id="AFD62963.1"
FT                   /translation="MLGAYYQIFPSEENYSYTPVQTQESFSGAKAGDSSEHVFSKVVVA
FT                   LIIILFSVGIIYLAYSLFLKDLILLLKAKKQRTTTEIGFGNTPGRPGSQPQQNVGPI"
FT   CDS             293..1057
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H9BA85"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:H9BA85"
FT                   /protein_id="AFD62964.1"
FT                   /translation="MSGRFKGQVYSRKRGRNAKAYQALGVKSQRELEQLVNQPGRPIGN
FT                   RRPSLQVAEYLWTTNKAGVTFSPGGGTYLFTNYPQGANENCRHTNRTITYKMAIKCWVA
FT                   LDGSMVARVAKFPVHFWLVYDKNPGDTNLSPSAIFDSLYQDQPGTWTVTRNVCHRFVVK
FT                   KSWSVMLESNGIDPSKSQSTSYYGPGPCYNWRHMTKFFKRLGVSTEWKNSSTGDVADIK
FT                   EGALYLVCAPGGGATVRVGGRFRMYFKSVGNQ"
FT   CDS             complement(join(1213..1626,1716..2315))
FT                   /codon_start=1
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:H9BA86"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:H9BA86"
FT                   /protein_id="AFD62966.1"
FT                   /translation="MPSSSKRQNNFRLQTKYVFLTYPHCSSTATSLRDFLWEKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRGDIRDPSFFDFEGNHPNIQPAKNSEQVLDYISK
FT                   DGNVITRGDFRKHKVSPTKHDERWRTIIQTATTKEEYLGMIRDQFPHEWATKLQWLEYS
FT                   ANKLFPDIEPPYENPFSPIDLQCHEEIQEWLNRDLYVEPEQLQHRRNSLYICGPNRTGK
FT                   TTWARSLGRHNYFNGGVDFTTYDINATYNIVDDIPFKFCPNWKQLVGSQKDFTVNPKYG
FT                   KKKRIKGGIPCIILVNNDDDWLLDMSSSQKEYFESNCKIHYMYSGETFIAPESSSH"
FT   CDS             complement(1425..2315)
FT                   /codon_start=1
FT                   /product="RepA protein"
FT                   /db_xref="GOA:H9BA87"
FT                   /db_xref="InterPro:IPR001146"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:H9BA87"
FT                   /protein_id="AFD62965.1"
FT                   /translation="MPSSSKRQNNFRLQTKYVFLTYPHCSSTATSLRDFLWEKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRGDIRDPSFFDFEGNHPNIQPAKNSEQVLDYISK
FT                   DGNVITRGDFRKHKVSPTKHDERWRTIIQTATTKEEYLGMIRDQFPHEWATKLQWLEYS
FT                   ANKLFPDIEPPYENPFSPIDLQCHEEIQEWLNRDLYVVSVDAYTLIHPNINYQTATEDL
FT                   IWMDHFTRNPNNSNTEETPSTSADQIVPERQPGPAVSADTTTSTEEWTSPRTTLTPPTI
FT                   SSTTSPSSSAQTGSN"
XX
SQ   Sequence 2587 BP; 691 A; 481 C; 649 G; 766 T; 0 other;
     atgttaggcg cctactatca aatattccct tctgaggaaa attactctta tacccctgtt        60
     cagacgcagg agtctttttc tggcgcgaaa gcaggtgatt catccgagca cgtattttcg       120
     aaagtcgtcg ttgctttaat tattattctt ttttcagtgg gaatcattta tcttgcctat       180
     tctttatttt taaaagattt gatattatta ttaaaggcga aaaagcagag gacgacgact       240
     gagatagggt ttggtaatac ccctggtaga cccggttctc aacctcagca aaatgtcggg       300
     ccgatttaag ggacaagtgt acagcaggaa aaggggccgt aatgcaaagg cgtatcaggc       360
     tctgggagtt aaatctcaac gggagttgga gcagttagtt aaccaaccag gacgtcctat       420
     tggtaatagg cgtccgtcac tgcaggtcgc agagtatctg tggacgacca acaaggctgg       480
     tgtgacgttc tcgcctggtg ggggaactta tttgttcact aattaccctc aaggggcgaa       540
     cgagaactgc aggcacacta accggaccat aacgtacaag atggctatca agtgttgggt       600
     tgccttggat gggtctatgg tggctagggt tgcaaagttc ccagtccact tctggttagt       660
     gtacgacaag aaccctggtg atacgaatct ttctccatcg gctatttttg atagtctcta       720
     tcaagatcag cctgggactt ggactgtaac gaggaatgtg tgtcataggt ttgtcgttaa       780
     aaagtcttgg tccgtgatgc tggagtctaa tgggattgat cccagtaagt ctcagtccac       840
     atcatattat gggcctgggc cttgttataa ttggaggcac atgaccaaat tttttaaacg       900
     tttaggagtt agtactgagt ggaagaattc ttccactggt gatgttgctg atattaagga       960
     aggagcacta taccttgtat gtgctcctgg tggtggtgct actgtaagag ttggcggtag      1020
     attccgcatg tatttcaaat ccgttggcaa tcaataaaaa tgttgttatt ttgatttcat      1080
     attaatgagc ttcagtgtag agaaattcaa atcgtattaa taaaaacccg gaatacaaaa      1140
     acacacgaaa aggaaaaaaa gacaccttac aatcattaca ctctatatac cctcctatga      1200
     ggagaggcac gttcagtgac tcgacgattc aggagcaata aatgtctcgc cgctatacat      1260
     ataatggatc ttgcagttgg attcaaagta ttccttctga gaggaagaca tatctaataa      1320
     ccagtcgtcg tcattattaa ctaatataat acatggtatt ccccctttga tcctcttctt      1380
     tttgccgtat tttggattta cggtgaagtc cttctgggaa cccactagtt gcttccagtt      1440
     tgggcagaac ttgaagggga tgtcgtcgac gatattgtag gtggcgttaa tgtcgtacgt      1500
     ggtgaagtcc actcctccgt tgaagtagtt gtgtctgccg agactgcggg cccaggttgt      1560
     ctttccggta cgatttggtc cgcagatgta gagggagttt cttcggtgtt ggagttgttc      1620
     gggttcctgg taaaatgatc catccatatc aaatcttcag ttgctgtttg gtaattgata      1680
     tttggatgaa ttaaagtgta agcatcgacg cttaccacgt acaggtctct gttcagccac      1740
     tcctgtattt cttcgtggca ctgaagatca atgggggaga aggggttttc atatggaggc      1800
     tctatatctg ggaacagttt attggcgcta tattcaagcc attgtagttt ggtcgcccat      1860
     tcatgaggga actgatccct aatcattccc aaatactcct ccttagttgt tgcagtctgg      1920
     ataatagttc gccatcgttc atcatgttta gttggggaga ccttgtgttt tcgaaagtct      1980
     cctctcgtga tgacgtttcc atcctttgat atgtaatcaa ggacttgttc agaattttta      2040
     gctggttgga tatttggatg gtttccttca aaatcaaaaa aagaagggtc acgtatatcc      2100
     cctcttttat caagctgaag aagacagtga agatggggag taccatcttg atggagctca      2160
     gtagcaacag caataaagaa aatagcaaaa cgtgagagtt tttcccagag aaagtctctg      2220
     aggcttgttg cagtagagct gcaatgggga taagtaagaa aaacatattt ggtttgtaga      2280
     cggaagttgt tttgtcgttt tgaagaagaa ggcattattt aggctttcct caaacagtgt      2340
     tttgcaaact ctatcttaac cagcgagtga gaaaatgagg aggggagtga ggtattttat      2400
     tttgaggggg aggggcgaat agcccgctga cacggtgggg gcgcactcgc ggaaatttaa      2460
     tgttacccgc gagtgcccgg gcccacgcga gcacgttagt gcgagcgata atgcgaggaa      2520
     aaagcagaaa tcctcgtgag gataagttag tgctatataa aggtgatgtg acataaaggt      2580
     gtggaaa                                                                2587
//