ID   JN989413; SV 1; circular; genomic DNA; STD; VRL; 2582 BP.
XX
AC   JN989413;
XX
DT   20-MAR-2012 (Rel. 112, Created)
DT   17-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Chickpea chlorosis virus-A isolate CpCV-A_AU_2683A_2002, complete genome.
XX
KW   .
XX
OS   Chickpea chlorosis virus-A
OC   Viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-2582
RX   PUBMED; 22406325.
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Kraberger S., Stainton D.,
RA   Dayaram A., Parry J.N., Pande D., Martin D.P., Varsani A.;
RT   "Molecular characterisation of dicot-infecting mastreviruses from
RT   Australia";
RL   Virus Res. 166(1-2):13-22(2012).
XX
RN   [2]
RP   1-2582
RA   Hadfield J., Thomas J.E., Schwinghamer M.W., Parry J.N., Kraberger S.,
RA   Stainton D., Dayaram A., Pande D., Martin D.P., Varsani A.;
RT   ;
RL   Submitted (03-NOV-2011) to the INSDC.
RL   School of Biological Sciences, University of Canterbury, Private Bag 4800,
RL   Christchurch 8140, New Zealand
XX
DR   MD5; 68a2c23a0203b9b388a8c5b7ec016653.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2582
FT                   /organism="Chickpea chlorosis virus-A"
FT                   /host="Cicer arietinum (chickpea)"
FT                   /isolate="CpCV-A_AU_2683A_2002"
FT                   /mol_type="genomic DNA"
FT                   /country="Australia"
FT                   /lat_lon="27.19 S 151.26 E"
FT                   /collection_date="2002"
FT                   /db_xref="taxon:887825"
FT   CDS             1..309
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:H9BA80"
FT                   /db_xref="InterPro:IPR002621"
FT                   /db_xref="UniProtKB/TrEMBL:H9BA80"
FT                   /protein_id="AFD62959.1"
FT                   /translation="MFPAKYQVFPSEENYSYTPFQTQESFSGAKAGDSSEHVFSKVVVA
FT                   LIIILFSVGIIYLAYTLFLKDLILLLKAKKQRTTTEIGFGNTPGRPGSQPQQNVGPI"
FT   CDS             293..1057
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H9BA81"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:H9BA81"
FT                   /protein_id="AFD62960.1"
FT                   /translation="MSGRFKGQVYSRKRGRNAKVYQAMGVKSQRELEQLVNQPGRPIAN
FT                   RRPALQVAEYLWTTNKAGVTFSPGGGTYLFTNYPQGANENCRHTNRTITYKMAIKCWVA
FT                   LDGSMVARVAKFPVHFWLVYDKNPGDTNPSPSAIFDTLYQDQPGTWTVTRNVCHRFVVK
FT                   KSWSVMLESNGIDPSKSQSTSYYGPGPCYNWRHMTKFFKRLGVSTEWKNSSTGDVADIK
FT                   EGALYLVCAPGGGATVRVGGRFRMYFKSVGNQ"
FT   CDS             complement(join(1213..1626,1716..2315))
FT                   /codon_start=1
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:H9BA82"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:H9BA82"
FT                   /protein_id="AFD62962.1"
FT                   /translation="MPSSSKRQNNFRLQTKYVFLTYPHCSSTATSLRDFLWEKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRGDIRDPSFFDFEGNHPNIQPAKNSEQVLDYISK
FT                   DGNVITRGDFRKHKVSPTKHDERWRTIIQTATTKEEYLGMIRDQFPHEWATKLQWLEYS
FT                   ANKLFPDIEPPYENPFSPIDLQCHEEIQEWLNRDLYVEPEQLQHRRNSLYICGPTRTGK
FT                   TSWARSLGRHNYFNGGVDFTTYDINATYNIVDDIPFKFCPNWKQLVGSQKDFTVNPKYG
FT                   KKKRIKGGIPCIILVNNDDDWLLDMSSSQKEYFESNCKIHYMDSEETFIAPESSSH"
FT   CDS             complement(1425..2315)
FT                   /codon_start=1
FT                   /product="RepA protein"
FT                   /db_xref="GOA:H9BA83"
FT                   /db_xref="InterPro:IPR001146"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:H9BA83"
FT                   /protein_id="AFD62961.1"
FT                   /translation="MPSSSKRQNNFRLQTKYVFLTYPHCSSTATSLRDFLWEKLSRFAI
FT                   FFIAVATELHQDGTPHLHCLLQLDKRGDIRDPSFFDFEGNHPNIQPAKNSEQVLDYISK
FT                   DGNVITRGDFRKHKVSPTKHDERWRTIIQTATTKEEYLGMIRDQFPHEWATKLQWLEYS
FT                   ANKLFPDIEPPYENPFSPIDLQCHEEIQEWLNRDLYVVSVDAYTLLHPNINYQTATEDL
FT                   IWMDHFTRNPNNSNTEGTPSTSADQLVPERPAGPAVSADTTTSTEEWTSPRTTLTPPTI
FT                   SSTTSPSSSAQTGSN"
XX
SQ   Sequence 2582 BP; 694 A; 489 C; 641 G; 758 T; 0 other;
     atgtttcccg ccaaatacca agtgttccca tctgaggaga attactctta tacccctttt        60
     cagacgcagg agtctttttc aggcgcgaaa gcaggtgatt catccgagca cgtcttctct       120
     aaagtcgtcg ttgctttaat tattattctt ttttcagtgg gaatcattta tcttgcgtat       180
     actttatttt taaaagattt gatattatta ttaaaggcga aaaagcagag gacgactact       240
     gagatagggt ttggtaatac ccctggtaga cccggttctc aacctcagca aaatgtcggg       300
     ccgatttaag ggacaagtgt acagcaggaa aaggggtcgt aatgcaaagg tgtatcaggc       360
     tatgggagtt aaatcgcaac gggagttgga gcagttagtt aaccaaccag gacgtcctat       420
     tgctaatagg cgtccggcac tgcaggtcgc agagtatctg tggacgacca acaaggctgg       480
     tgtgacgttc tcgcctggtg ggggaactta tttgttcact aattaccctc aaggggcgaa       540
     cgagaactgc agacacacta accggaccat aacgtacaag atggctatca agtgttgggt       600
     tgccctggat gggtctatgg tggctagggt tgctaagttc ccagtccact tctggttagt       660
     gtacgacaag aaccctggtg atacgaatcc ttctccatcg gctatttttg atactctgta       720
     tcaagatcag cctgggactt ggactgtaac gaggaatgtg tgtcataggt tcgtcgttaa       780
     aaagtcttgg tccgtgatgc tggagtctaa tgggattgat cccagtaagt ctcagtcgac       840
     atcatattat gggcctgggc cttgttataa ttggaggcac atgaccaaat tttttaaacg       900
     tttaggagtt agtactgagt ggaagaattc ttccactggt gatgttgctg atattaagga       960
     aggagcacta taccttgtat gtgctcctgg tggtggtgct actgtaagag ttggcggtag      1020
     attccgcatg tatttcaaat ccgttggcaa tcaataaaaa tgttgtaatt ttgatttcat      1080
     attaatgagc ttcagtgtag agaaattcaa atcttattaa taaaaacccg gaatacaaaa      1140
     acacacgaaa aggaaaaaaa gacaccttac aatcattaca ctctatatac cctcctatga      1200
     ggagaggcac gttcagtgac tcgacgattc aggagcaata aatgtctcct ctgaatccat      1260
     ataatggatc ttgcagttgg attcaaagta ttccttctga gaggaagaca tatctaataa      1320
     ccagtcgtcg tcattattaa ctaatataat acatggtatt ccccctttga tcctcttctt      1380
     tttgccgtat tttgggttta cggtgaagtc cttctgggaa cccactagtt gcttccagtt      1440
     tgggcagaac ttgaagggga tgtcgtcgac gatattgtag gtggcgttaa tgtcgtacgt      1500
     ggtgaagtcc actcctccgt tgaagtagtt gtgtctgccg agactgcggg cccagctggt      1560
     ctttccggta cgagttggtc cgcagatgta gagggagttc cttcggtgtt ggagttgttc      1620
     gggttcctgg taaaatggtc catccatatc aaatcttcag ttgctgtttg gtaattgata      1680
     tttggatgaa gtaaagtgta agcatcgacg cttaccacgt aaaggtctct gttcagccac      1740
     tcctgtattt cttcgtggca ctgaagatca atgggggaga aggggttttc atatggaggc      1800
     tctatatctg ggaacagttt attggcgcta tattcaagcc attgtagttt ggtcgcccat      1860
     tcatgaggga actgatccct aatcattccc aaatactcct ccttagttgt tgcagtctgg      1920
     ataatagttc gccatcgttc atcatgttta gttggggaga ccttgtgttt tcgaaagtct      1980
     cctctcgtga tgacgtttcc atcctttgat atgtaatcaa ggacttgttc agaattttta      2040
     gctggttgga tatttggatg gtttccttca aaatcaaaaa aagaagggtc acgtatatcc      2100
     cctcttttat caagctgaag aagacagtga agatggggag taccatcttg atggagctca      2160
     gtagcaacag caataaagaa aatagcaaaa cgtgagagtt tttcccagag aaagtctctg      2220
     aggcttgttg cagtagagct gcaatgggga taagtaagaa aaacatattt ggtttgaaga      2280
     cggaagttgt tttggcgttt tgaagaagaa ggcattattt aggctttcct caaacagtgt      2340
     tttgcaaact ctatcttaac cagcgagtga ggaaaatgag gaaggggagt gaggtattta      2400
     tttgaatgga gggcgaatag cccgctgaca cgtggggcgc actcgcggaa tttaatgtta      2460
     cccgcgagtg cccggcccca cgcgagcacg ttagtgcgag cgatattgcg aggaaaaagc      2520
     agaaatcctc gtgaggataa gttattgcta tataaagatg atgtgacatc ccaaagttga      2580
     aa                                                                     2582
//