ID   JN979405; SV 1; linear; genomic RNA; STD; VRL; 855 BP.
XX
AC   JN979405;
XX
DT   13-MAR-2012 (Rel. 112, Created)
DT   20-MAR-2012 (Rel. 112, Last updated, Version 2)
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DE   Papaya ringspot virus W isolate W7 coat protein gene, partial cds.
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KW   .
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OS   Papaya ringspot virus W
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-855
RA   Basavaraj Y.B., Reetika K., Prachi S., Phaneendra C., Jain R.K.;
RT   "Studies on genetic diversity of PRSV-P populations from Bangladesh based
RT   on coat protein";
RL   Unpublished.
XX
RN   [2]
RP   1-855
RA   Basavaraj Y.B., Reetika K., Prachi S., Phaneendra C., Jain R.K.;
RT   ;
RL   Submitted (01-NOV-2011) to the INSDC.
RL   Division of Plant Pathology, Advanced Centre for Plant Virology, Indian
RL   Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012,
RL   India
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DR   MD5; 9a8265c5c3337e14c70e957ea5125f84.
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FH   Key             Location/Qualifiers
FH
FT   source          1..855
FT                   /organism="Papaya ringspot virus W"
FT                   /host="watermelon"
FT                   /isolate="W7"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Koppal, Karnataka"
FT                   /isolation_source="watermelon leaf showing vein banding and
FT                   leaf distortion symptom"
FT                   /collected_by="Y. B. Basavaraj"
FT                   /collection_date="27-Jan-2011"
FT                   /note="pathotype W"
FT                   /db_xref="taxon:12207"
FT   CDS             <1..>855
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:H9B498"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:H9B498"
FT                   /protein_id="AFD03847.1"
FT                   /translation="SKNEAVDAGLNEKLKEKEKQKEKEKQKEKEKDDASDGNDVSTSTK
FT                   TGERDRDVNAGTSGTFTVPRIKSFTDKMVLPRIKGKTVLNLNHLLQYNPQQIDISNTRA
FT                   TQSQFEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQVDYP
FT                   IKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFY
FT                   EVNSKTPDRAREAHMQMKAAALRNTSRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLL
FT                   GMRN"
XX
SQ   Sequence 855 BP; 297 A; 145 C; 210 G; 203 T; 0 other;
     tccaaaaacg aagctgtgga tgctgggttg aacgaaaagc tcaaagaaaa agaaaaacag        60
     aaagaaaaag aaaaacaaaa agaaaaagaa aaagatgatg ctagtgacgg aaatgatgtg       120
     tcgactagca caaaaactgg agagagagat agagatgtta acgctgggac tagtggaact       180
     ttcactgttc cgagaataaa atcatttact gataagatgg ttttgccaag aattaaggga       240
     aagactgtcc ttaatttaaa tcatcttctt cagtataatc cacaacaaat tgacatctct       300
     aatactcgtg ccactcaatc acagtttgag aagtggtatg agggagtgag gaatgattat       360
     ggcctcaatg ataatgaaat gcaagtgatg cttaatggct tgatggtttg gtgtatcgag       420
     aatggtacgt ctccagacat atctggtgtt tgggttatga tggatggaga aactcaagtc       480
     gattatccga tcaagccttt aattgagcat gcaactccat catttaggca aattatggct       540
     cacttcagta acgcggcaga agcatacatt gcgaagagaa atgctactga gaggtatatg       600
     ccgcggtatg ggatcaagag aaatttgact gacattagcc tcgctagata cgctttcgat       660
     ttctatgagg tgaattcgaa aacacctgat agggctcgcg aagctcacat gcagatgaaa       720
     gctgcagcgc tgcggaacac tagtcgcaga atgtttggta tggacggtag tgtcagtaac       780
     aaggaagaaa acacggagag acacacagta gaagatgtca acagagacat gcactctctc       840
     ctgggtatgc gcaac                                                        855
//