ID   JN979403; SV 1; linear; genomic RNA; STD; VRL; 861 BP.
XX
AC   JN979403;
XX
DT   13-MAR-2012 (Rel. 112, Created)
DT   20-MAR-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Papaya ringspot virus W isolate W21 coat protein gene, partial cds.
XX
KW   .
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OS   Papaya ringspot virus W
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-861
RA   Basavaraj Y.B., Reetika K., Prachi S., Phaneendra C., Jain R.K.;
RT   "Studies on genetic diversity of PRSV-P populations from Bangladesh based
RT   on coat protein";
RL   Unpublished.
XX
RN   [2]
RP   1-861
RA   Basavaraj Y.B., Reetika K., Prachi S., Phaneendra C., Jain R.K.;
RT   ;
RL   Submitted (01-NOV-2011) to the INSDC.
RL   Division of Plant Pathology, Advanced Centre for Plant Virology, Indian
RL   Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012,
RL   India
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DR   MD5; f4fa342059e043250caffd7c609a4436.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..861
FT                   /organism="Papaya ringspot virus W"
FT                   /host="pumpkin"
FT                   /isolate="W21"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Gadag, Karnataka"
FT                   /isolation_source="pumpkin leaf showing blistering and vein
FT                   banding"
FT                   /collected_by="Y. B. Basavaraj"
FT                   /collection_date="25-Jan-2011"
FT                   /note="pathotype W"
FT                   /db_xref="taxon:12207"
FT   CDS             <1..>861
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:H9B496"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:H9B496"
FT                   /protein_id="AFD03845.1"
FT                   /translation="SKNEAVDAGLNEKLKEKEKQKEKEKEKQKEKEKDDASDGNDVSTS
FT                   TKTGERDRDVNAGTSGTFTVPRIKSFTDKMVLPRIKGKTVLNLNHLLQYNPQQIDISNT
FT                   RATQSQFEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQVD
FT                   YPIKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFD
FT                   FYEVNSKTPDRAREAHMQMKAAALRNTSRRMFGMDGSVSNKEENTERHTVEDVNRDMHS
FT                   LLGMRN"
XX
SQ   Sequence 861 BP; 304 A; 146 C; 210 G; 201 T; 0 other;
     tccaaaaacg aagctgtgga tgctggattg aacgaaaagc tcaaagaaaa agaaaagcag        60
     aaagaaaaag aaaaagaaaa acaaaaagaa aaagaaaaag atgatgctag tgacggaaat       120
     gatgtgtcga ctagcacaaa aactggagag agagatagag atgtcaacgc tgggactagt       180
     ggaactttca ctgttccgag aataaaatca tttactgata agatggtttt gccaagaatt       240
     aagggaaaga ctgtccttaa tttaaatcat cttcttcagt ataatccaca acaaattgac       300
     atctctaata ctcgtgccac tcaatcacag tttgagaagt ggtatgaggg agtgaggaat       360
     gattatggcc tcaatgataa tgaaatgcaa gtgatgctaa atggcttgat ggtttggtgt       420
     atcgagaatg gtacgtctcc agacatatct ggtgtttggg ttatgatgga tggggaaacc       480
     caagtcgatt atccgatcaa gcctttaatt gaacatgcaa ctccatcatt taggcaaatt       540
     atggctcact tcagtaacgc ggcagaagca tacattgcga agagaaatgc tactgagagg       600
     tatatgccgc ggtatgggat caagagaaat ttgactgaca ttagcctcgc tagatacgct       660
     ttcgatttct atgaggtgaa ttcgaaaaca cctgataggg ctcgtgaagc tcacatgcaa       720
     atgaaagctg cagcgctgcg aaacactagt cgcagaatgt ttggtatgga cggcagtgtc       780
     agtaacaagg aagaaaacac ggagagacac acagtggaag atgtcaatag agacatgcac       840
     tctctcctgg gtatgcgcaa c                                                 861
//